Synthesis, crystal structure and magnetic property of the novel dinuclear nickel(II) complex with 4-(p-methoxyphenyl)-3,5-bis(pyridine-2-yl)-1,2,4-triazole

A novel dinuclear nickel(II) complex, [Ni₂(MOBPT)₂Cl₂(H₂O)₂]Cl₂ · 7H₂O (MOBPT = 4-(p-methoxyphenyl) −3,5-bis(pyridine-2-yl)-1,2,4-triazole), has been synthesized and characterized by elemental analysis, IR and single crystal X-ray diffraction methods. The crystal structure determination shows that the dinuclear Ni₂N₈ unit is almost planer in which each Ni^II ion is coordinated by four nitrogen atoms from MOBPT equatorially and a water molecule and a chloride ion axially in a distorted octahedral geometry. Magnetic measurements reveal a relatively weak antiferromagnetic exchange in the complex.     

Near-infrared fluorimetric determination of nucleic acids by shifting the ion-association equilibrium between heptamethylene cyanine and Alcian blue 8GX

A new method based on near-infrared (near-IR) fluorescence recovery, employing a two-reagent system which is composed of an anionic heptamethylene cyanine (HMC) and a polycationic phthalocyanine dye, Alcian blue 8GX, is presented for the determination of nucleic acids. With a maximum excitation wavelength at 766 nm and a maximum emission wavelength at 796 nm, the fluorescence recovery is linear with the concentration of nucleic acids added. Factors including the acidity of the medium, the reaction time, the optimal ratio of the two reagents, as well as the influence of foreign substance were all investigated. Meanwhile, the mechanism of fluorescence recovery was also studied. Under the optimal conditions, the linear ranges of the calibration curves were 10-250 ng ml⁻¹ for calf thymus DNA (CT DNA) and 10-200 ng ml⁻¹ for yeast RNA. The detection limits were 6.8 ng ml⁻¹ for CT DNA and 6.3 ng ml⁻¹ for yeast RNA, respectively. The method has been applied to the analysis of practical samples and the recovery results were satisfactory.     

Laser-assisted electron capture by a fast proton from a hydrogen atom

The first Born approximation is used to study the laser-assisted electron capture by a fast proton from a hydrogen atom. The laser modification on differential cross section peaks sharply in the forward direction. With the impact energy increasing, the change in integral cross section becomes notable. The more intense the laser, the greater the cross section is; the lower the frequency, the greater the cross section.     

Study on the interaction of platinum(IV), gold(III) and silver(I) ions with DNA

Fluorescence, absorption spectra have been produced by the interaction of platinum(IV), silver(I) and gold(III) ions with the berberine–DNA system (berberine, Scheme 1). Platinum(IV) and gold(III) ions show different effects from that of silver(I) ion on the spectral characteristics of the berberine–DNA system. Quenching fluorescence is seen with platinum(IV) and gold(III) ions addition, whereas increasing fluorescence is observed for silver(I) ions. The addition of gold(III) and silver(I) ions cause an increase in absorption of the berberine–DNA system. The above results suggest that different metal ions exhibit different affinities when binding to DNA correlates well with the ions’ charge, structure and the coordination ability.     

Local solvent density augmentation around a solute in supercritical solvent bath: 1. A mechanism explanation and a new phenomenon

A recently proposed partitioned density functional (DF) approximation (Phys. Rev. E 2003, 68, 061201) and an adjustable parameter-free version of a Lagrangian theorem-based DF approximation (LTDFA: Phys. Lett. A 2003, 319, 279) are combined to propose a DF approximation for nonuniform Lennard-Jones (LJ) fluid. Predictions of the present DF approximation for local LJ solvent density inhomogeneity around a large LJ solute particle or hard core Yukawa particle are in good agreement with existing simulation data. An extensive investigation about the effect of solvent bath temperature, solvent-solute interaction range, solvent-solute interaction magnitude, and solute size on the local solvent density inhomogeneity is carried out with the present DF approximation. It is found that a plateau of solvent accumulation number as a function of solvent bath bulk density is due to a coupling between the solvent-solute interaction and solvent correlation whose mathematical expression is a convolution integral appearing in the density profile equation of the DF theory formalism. The coupling becomes stronger as the increasing of the whole solvent-solute interaction strength, solute size relative to solvent size, and the closeness to the critical density and temperature of the solvent bath. When the attractive solvent-solute interaction becomes large enough and the bulk state moves close enough to the critical temperature of the solvent bath, the maximum solvent accumulation number as a function of solvent bath bulk density appears near the solvent bath critical density; the appearance of this maximum is in contrast with a conclusion drawn by a previous investigation based on an inhomogeneous version of Ornstein-Zernike integral equation carried out only for a smaller parameter space than that in the present paper. Advantage of the DFT approach over the integral equation is discussed.     

Rational principles of compound selection for combinatorial library design

It is practically impossible in a short period of time to synthesize and test all compounds in any large exhaustive chemical library. We discuss rational approaches to selecting representative subsets of virtual libraries that help direct experimental synthetic efforts for both targeted and diverse library design. For targeted library design, we consider principles based on the similarity to lead molecules. In the case of diverse library design, we discuss algorithms aimed at the selection of both diverse and representative subsets of the entire chemical library space. We illustrate methodologies with several practical examples.     

Studies on the inactivation of bovine liver enoyl-CoA hydratase by (methylenecyclopropyl)formyl-CoA: elucidation of the inactivation mechanism and identification of cysteine-114 as the entrapped nucleophile

The inhibitory properties of (methylenecyclopropyl)formyl-CoA (MCPF-CoA), a metabolite derived from a natural amino acid, (methylenecyclopropyl)glycine, against bovine liver enoyl-CoA hydratase (ECH) were characterized. We have previously demonstrated that MCPF-CoA specifically targets ECHs, which catalyze the reversible hydration of alpha,beta-unsaturated enoyl-CoA substrates to the corresponding beta-hydroxyacyl-CoA products. Here, we synthesized (R)- and (S)-diastereomers of MCPF-CoA to examine the stereoselectivity of this inactivation. Both compounds were shown to be competent inhibitors for bovine liver ECH with nearly identical second-order inactivation rate constants (k(inact)/K(I)) and partition ratios (k(cat)/k(inact)), indicating that the inactivation is nonstereospecific with respect to ring cleavage. The inhibitor, upon incubation with bovine liver ECH, labels a tryptic peptide, ALGGGXEL, near the active site of the protein, where X is the amino acid that is covalently modified. Cloning and sequence analysis of bovine liver ECH gene revealed the identity of the amino acid residue entrapped by MCPF-CoA as Cys-114 (mature sequence numbering). On the basis of gHMQC (gradient heteronuclear multiple quantum coherence) analysis with [3-(13)C]-labeled MCPF-CoA, the ring cleavage is most likely induced by the nucleophilic attack at the terminal carbon of the exomethylene group (C(2)'). We propose a plausible inactivation mechanism that involves relief of ring strain and is consistent with examples found in the literature. In addition, these studies provide important clues for future design of more efficient and selective inhibitors to control and/or regulate fatty acid metabolism.     

DFT study on the geometric, electronic structure and Raman spectra of 5,15-diphenylporphine

The ground state geometric, electronic structure and Raman spectra of 5,15-diphenylporphine (H(2)DPP) have been studied using B3LYP/6-31G(d) method and compared with that of well-studied free base porphine (H(2)P) and meso-tetraphenylporphine (H(2)TPP). Calculation shows that 5,15-substitution causes remarkable in-plane distortion, whereas the resulting out-of-plane distortion is negligible. The calculated electronic structure of H(2)DPP is consistent with the absorption spectra compared with H(2)P and H(2)TPP. The calculated vibrational frequencies of H(2)DPP scaled with a single factor of 0.971 agree well with experimental data (the rms error is 8.0 cm(-1)). The assignment of experimental Raman bands of H(2)DPP was discussed on the basis of theoretical calculation and the comparison with that of H(2)P and H(2)TPP. The splitting of some vibrational modes involving the motion of C(m) atom, such as nu(1), nu(8), and nu(10), was observed and was attributed to the diversification of the environment around C(m) atoms. As the shift of absorption peaks, the shift of some structure-sensitive Raman bands of H(2)DPP form that of H(2)TPP and H(2)P was attributed to the in-plane nuclear reorganization (IPNR) induced by phenyl-substitution, though the contribution of nonplanarity mechanism could not be excluded completely.     

Synthesis of new 1,3-bis（phenylethynyl）disilazanes

Three new 1,3-bis(phenylethynyl)disilazanes were synthesized from the reaction of 1,3-dichlorodisilazanes with (phenylethy- nyl)lithium,and characterized by infrared (IR) spectra,nuclear magnetic resonance (NMR) and mass spectrometry (MS).     

吸附式增湿饱和器

本文介绍了美国GE公司DPG—300分流湿度发生器的工作原理。针对该发生器的增湿饱和度不够的缺陷,提出了改进措施。改进的方法是通过在增湿饱和器内放置能够吸附水的吸附材料而实现的。