On-line storage and retrieval of chemical information. II. Substructure and biological activity searching

An improved interactive system for searching substructure and biological activity data has been developed. Features of the system include a two-level substructure search (fragment screen and atom by atom) and an expanded biological activity data base. The system operates on a file of about 150 000 compounds.     

A.C. Cyclic voltammetry: A digital simulation study of the slow scan limit condition for a reversible electrode process

Rate laws presented to date for analysis of a.c. cyclic voltammetric data have invoked the so-called “slow scan limit approximation” which requires that ΔEω ? v, where Δ E and ω are the applied a.c. potential amplitude and angular frequency, respectively, and v is the d.c. potential scan rate. To provide a more useful guideline for the experimentalist than this qualitative condition, a pure digital simulation approach has been used to compute the a.c. cyclic time domain waveform for a reversible process under small amplitude conditions. The a.c. content of this waveform is extracted by the digital FFT alogirthm. Results of this study are presented here. Among the conclusions reached are more quantitative limitations for the slow scan limit rate laws describing the fundamental and second harmonic responses (approximately 128 a.c. cycles/d.c. cyclic sweep and 512 a.c. cycles/d.c. cyclic sweep, respectively) and an interesting prediction that the latter limitations can be relaxed further by a current waveform subtraction strategy, to as low as about 16 a.c. cycles/d.c. cyclic sweep for the fundamental and second harmonics. The cycles/sweep values assume one triangular wave potential scan of ±200 mV is encompassed.     

Effect of ion pairing on steady-state voltammetric limiting currents at microelectrodes Part I. Theoretical principles

Voltammetric studies in solutions of high resistivity are facilitated by the use of microelectrodes under steady-state conditions. Such solutions are encountered with solvents of low permittivity because of the very sparing solubility of electrolytes. Moreover, in such media the supporting electrolyte, as well as the electroactive ionic species, is usually extensively ion paired. Here we predict the limiting current that will flow in these circumstances, when a monovalent ion undergoes a one-electron transfer at a hemispherical microelectrode to form a neutral product. The ion pairing equilibria are assumed to be fast but all diffusion coefficients are treated as distinct. An analytical solution is elusive in the general case, but a simple numerical procedure allows the limiting current to be predicted for any combination of the system parameters. Several special cases are also discussed, some of which yield explicit formulae for the limiting current. In a companion paper, experimental data are compared with the theoretical predictions.     

Synthesis and structure of [(Sn(mu-PCy))3(Na x PMDETA)2], containing an electron-deficient [(Sn(mu-PCy))3]2- dianion

The reaction of CyPHNa with Sn(NMe2)2 in the presence of PMDETA (= (Me2NCH2CH2)2NMe) gives the title compound [(Sn(mu-PCy))3(Na x PMDETA)2] (1), containing an electron-deficient [(Sn(mu-PCy))]3(2-) dianion with a novel two-electron, three centre (2e-3c) bonding arrangement.     

Instrumental advantages obtained with short controlled drop-time a.c. polarography

The performance of short drop-time a.c. polarography has been examined in detail, and found to be better than that for natural drop-times in almost every respect. Uncompensated resistance terms are smaller and potentiostat stability is improved. In addition, faster potential scanrates and more rapid data acquisition are possible. A variation of the drop-time over at least three orders of magnitude is possible and this, coupled with excellent instrumental performance, should offer considerable scope in studies of electrode kinetics.     

Reactivity and reaction pathways of electrochemically generated 17-electron tricarbonyl steroid chromium cations

Electrochemical oxidation of α- and β-diastereomers of a range of steroid hormone receptor marker chromium tricarbonyl complexes, (steroid)Cr(CO)₃, have been examined at platinum electrodes in dichloromethane. Data confirm the general nature of previously published conclusions on the oxidation of (arene)Cr(CO)₃ complexes (arene = benzene or steroid). That is, with 0.1 M Bu₄NPF₆ as the electrolyte, and in the absence of nucleophiles, a reversible oneelectron process, (steroid)Cr(CO)₃ ? [(steroid)Cr(CO)₃]⁺ + e^?, is observed, followed by an irreversible one-electron process at considerably more positive potentials. The reversible half-wave potentials (approximately E°-values) calculated for the [(steroid)Cr(CO)₃]⁺/(steroid)Cr(CO)₃ redox couple are shown to be dependent on whether the α- or β-diastereomer is oxidized. Similarly the rate of nucleophilic attack on the 17-electron cation [(steroid)Cr(CO)₃]⁺ by nucleophiles such as ClO, PPh₃ and bis(diphenylphosphine)methane confirms a previous observation that the stereochemistry of this class of compound is important with respect to redox, kinetic and hormone receptor properties. The nature of the electrochemical data obtained on the (arene)Cr(CO)₃ complexes in the presence of nucleophiles suggests that reactions associated with the nucleophilic attack on the 17-electron cations are complex and that a range of reaction pathways occur simultaneously. Electrochemical studies on the oxidation of (benzene)Cr(CO)₂PPh₃ and (oestradiol)Cr(CO)₂PPh₃ confirm some aspects of the proposed mechanisms, although it is clear that a great deal still has to be learned concerning mechanistic aspects of nucleophilic attack on these 17-electron complexes.     

Non-Template-Centered, Closed Tetravanadium Phosphate and Phosphonate Clusters

Tetranuclear V(III) complexes, [HB(pz)(3)](4)V(4)(&mgr;-C(6)H(5)OPO(3))(4) (I), its acetonitrile solvate (I.4CH(3)CN), and [HB(pz)(3)](4)V(4)(&mgr;-O(2)NC(6)H(4)OPO(3))(4).4C(7)H(8).H(2)O (II), and tetranuclear vanadyl complexes, (t-Bupz)(4)V(4)O(4)(&mgr;-C(6)H(5)PO(3))(4).2H(2)O (III) and (t-Bupz)(5)V(4)O(4)(&mgr;-C(6)H(5)PO(3))(4).4CH(3)CN.0.6 H(2)O (IV), have been prepared and characterized by spectroscopic, magnetic, and electrochemical methods (pz = pyrazole, t-Bupz = tert-butylpyrazole). The use of organic solvents and bulky organic groups as ancillary ligands leads to formation of neutral species instead of the anionic clusters commonly found in the hydrothermal synthesis of vanadium organophosphate/phosphonate systems. Complexes I.4CH(3)CN and IV have also been characterized by single-crystal X-ray diffraction. Crystal data: I.4CH(3)CN, triclinic, P&onemacr;, a = 15.495(3) ?, b = 17.000(3) ?, c = 17.949(4) ?, alpha = 89.17(3) degrees, beta = 86.00(3) degrees, gamma = 78.60(3) degrees, Z = 2; IV, triclinic, P&onemacr;, a = 15.541(3) ?, b = 16.340(2) ?, c = 19.069(5) ?, alpha = 83.58(2) degrees, beta = 79.67(2) degrees, gamma = 63.68(1) degrees, Z = 2. Both are closed clusters, the core structure of the first consisting of a cubane-like arrangement of metal octahedra and phosphate tetrahedra and the core structure of the second consisting of a distorted, collapsed variant of the first. Unlike other vanadium phosphate clusters, these compounds form in the absence of a central, templating agent. As such they represent the simplest form of a closed cluster in which steric forces and cluster connectivity requirements play the primary role in organizing the cluster framework.     

Second-sphere coordination in hexaamminecobalt(III) salt with organic sulphonate anion: Synthesis, characterisation and X-ray crystal structure of [Co(NH3)6](CH3SO3)3

Reaction of hexaamminecobalt(III) chloride with the silver salt of methanesulphonic acid in aqueous medium (1:3 molar ratio) forms hexaamminecobalt(III) methanesulphonate, [Co(NH₃)₆](CH₃SO₃)₃, in high yield. This cobalt(III) complex has been characterized by spectroscopic techniques (UV/visible, IR and NMR) and its solubility product determined. The X-ray crystal structure shows that the [Co(NH₃)₆]³⁺ cations interact at the second sphere by sharing edges with the anions, via N–H  O hydrogen bonds. The structure is related to that of [Co(NH₃)₆]Cl(CH₃SO₃)₂, but is modified to accommodate additional anions in place of Cl⁻.