Generalized two-dimensional correlation spectroscopy-- Theory and applications in analytical field

Since the theory of generalized two-dimensional (2-D) correlation spectroscopy was proposed, it has been keenly concerned in scientific research and its analytical method has been widely applied in various analytical fields. The mathematical process to construct generalized 2-D correlation spectroscopy and the physical meaning of 2-D correlation spectral map are described, and three examples in the fields of chemical analysis and molecular biology are provided, such as the component analysis of organic solvent, the analysis of biological molecules in the solvent with different pH values and structural analysis of protein. The theory and analytical method of generalized 2-D correlation spectroscopy are also detailedly commented.     

Collective Synthesis and Biological Evaluation of Tryptophan‐Based Dimeric Diketopiperazine Alkaloids

A concise two one‐pot synthesis of WIN 64821, eurocristatine, 15,15′‐bis‐epi‐eurocristatine, ditryptophenaline, ditryptoleucine A, WIN 64745, cristatumin C, asperdimin, naseseazine A, and naseseazine B is detailed, based on a unique bioinspired dimerization reaction of tryptophan derivatives in aqueous acidic solution and a one‐pot procedure for the construction of diketopiperazine rings. Total yields of these alkaloid syntheses were from 10 up to 27 %. In addition, 1′‐(2‐phenylethylene)‐ditryptophenaline was synthesized by using three one‐pot operations. The studies detailed herein provided synthesized natural products for inhibitory activities of ubiquitin‐specific protease 7 (USP7) and foam cell formation in macrophages. The newly listed biological evaluation for tryptophan‐based dimeric diketopiperazine alkaloids discovered 15,15′‐bis‐epi‐eurocristatine, 1′‐(2‐phenylethylene)‐ditryptophenaline, and WIN 64745 as new drug candidates.     

Targeting Cancer with PCPA‐Drug Conjugates: LSD1 Inhibition‐Triggered Release of 4‐Hydroxytamoxifen

Targeting cancer with small molecule prodrugs should help overcome problems associated with conventional cancer‐targeting methods. Herein, we focused on lysine‐specific demethylase 1 (LSD1) to trigger the controlled release of anticancer drugs in cancer cells, where LSD1 is highly expressed. Conjugates of the LSD1 inhibitor trans‐2‐phenylcyclopropylamine (PCPA) were used as novel prodrugs to selectively release anticancer drugs by LSD1 inhibition. As PCPA‐drug conjugate (PDC) prototypes, we designed PCPA‐tamoxifen conjugates 1 a and 1 b , which released 4‐hydroxytamoxifen in the presence of LSD1 in vitro. Furthermore, 1 a and 1 b inhibited the growth of breast cancer cells by the simultaneous inhibition of LSD1 and the estrogen receptor without exhibiting cytotoxicity toward normal cells. These results demonstrate that PDCs provide a useful prodrug method that may facilitate the selective release of drugs in cancer cells.     

Polarized infrared spectroscopic study on changes in molecular orientation and interaction during phase transitions of a ferroelectric liquid crystal with a naphthalene ring

Temperature-dependent polarized infrared spectra were measured over the temperature range 105-30°C for a ferroelectric liquid crystal with a naphthalene ring (FLC-1) in the isotropic, smectic A (SmA), and chiral smectic C (SmC*) phases to investigate its molecular conformation, interactions, and alignment in each phase. It has been found, from the temperaturedependent spectral changes in the 1610-1600 cm^-1 region, that the degree of twist between the naphthalene and benzene rings of FLC-1 changes with temperature. The peak intensity of the band at 1606 cm^-1 containing contributions from both the benzene and naphthalene ring stretching modes begins to decrease, not suddenly but gradually, upon going from the SmA phase to the SmC* phase, suggesting that the molecular orientation of the two rings changes gradually between the two phases. The frequencies of two CH₂ stretching bands suggest that the disorder of the alkyl chain of FLC-1 is similar for the liquid crystal phase and the isotropic liquid phase. The splitting of the core C=O stretching band indicates that the resonance system consisting of the benzene ring and the C=O group in the core part of FLC-1 is involved in two kinds of intermolecular interaction between adjacent molecules in the liquid crystal phase.     

Phase-transitions in Langmuir-Blodgett and cast films of a ferroelectric liquid crystal.

Langmuir-Blodgett films and cast films of a ferroelectric liquid crystal of sec-butyl-6-(4-(nonyloxy)benzoyloxy)-2-naphthoate have been fabricated. Their thermal behavior was investigated using infrared spectroscopy at elevated temperature combined with principal component analysis. The result shows a new phase transition from smectic A to nematic phase, compared to the phase sequence obtained by polarizing optical microscopy. Another solid transition of different isomeric crystals was also found, which was confirmed by calorimetric measurement.     

Discrimination of ethylene/vinyl acetate copolymers with different composition and prediction of the content of vinyl acetate in the copolymers and their melting points by near-infrared spectroscopy and chemometrics

Near-infrared (NIR) diffuse reflectance spectra have been measured by use of a rotating drawer for pellets of 12 kinds of ethylene/vinyl acetate (EVA) copolymers with vinyl acetate (VA, the comonomer) varying in the 7–44 wt % range. They are unambiguously discriminated from one another by a score plot of the principal component analysis (PCA) Factor 1 and 2, based upon the NIR spectra pretreated by multiplicative scatter correction (MSC). Principal component (PC) weight loadings for Factor 1 show that the discrimination relies largely upon bands due to the overtone and combination modes arising from the VA unit. We have found one “outlier” in the score plot and elucidated its spectral characteristics based upon PC weight loadings for Factor 2. Partial least-squares (PLS) regression has been applied to propose calibration models which predict the VA content in EVA. The models have been prepared for three kinds of pretreatment, the first derivative, the second derivative, and MSC; and four kinds of wavelength regions. The NIR spectra in the 1100–2200 nm region after the MSC treatment has given the best correlation coefficient and standard error of prediction (SEP) of 0.998 and 0.70%, respectively. The calibration models, prepared by NIR diffuse reflectance spectroscopy for the pellet samples, are compared with previously reported models by NIR transmission spectroscopy for the flowing molten samples, and with those by Raman spectroscopy for the pellet samples. PLS regression has also allowed us to predict melting points of the copolymers with the correlation coefficient and SEP of 0.997 and 0.78°C, respectively. © 1998 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 36: 1529–1537, 1998     

Developments of GNSS buoy for a synthetic geohazard monitoring system

A global navigation satellite system (GNSS) buoy system for early tsunami warnings has been developed for more than 20 years. The first GNSS buoy system using a real-time kinematic algorithm (RTK) was implemented in the Nationwide Ocean Wave information network for Ports and HArbourS (NOWPHAS) wave monitoring system in Japan in 2008. The records of NOWPHAS were used to update the tsunami alert by the Japan Meteorological Agency (JMA), owing to the tsunami generated by the 2011 Tohoku-oki earthquake (Mw9.0). However, considering that the distance limit is less than 20 km for the RTK algorithm, a new system was designed by introducing a new positioning algorithm and satellite data transmission to place the buoy much farther from the coast. A new technique for the continuous monitoring of ocean-bottom crustal movements was also implemented in the new system. The new buoy system can be used for weather forecasting and ionospheric monitoring as well.     

Potential of two-dimensional near-infrared correlation spectroscopy in studies of pre-melting behavior of nylon 12

This review paper discusses the potential of generalized two-dimensional (2D) near-infrared (NIR) correlation spectroscopy in studies of pre-melting behavior and hydrogen bonds of nylon 12. A 2D NIR study on dissociation and hydrogen bonds of N-methylacetamide (NMA) is also reviewed here as a model compound study of nylon 12. Fourier transform (FT)-NIR spectra in the region of 9000–5000 cm⁻¹ of nylon 12 were measured over a temperature range of 30–150°C where gradual weakening of inter- or intramolecular associative interactions and decrease of local order leading to the eventual fusion of nylon 12 crystals are observed. The 2D correlation analysis provided the following conclusions for the pre-melting behavior of nylon 12. (i) There are at least eight bands in the 6800–6100 cm⁻¹ region assignable to free- and hydrogen-bonded NH groups of nylon 12 in various environments. The asynchronous 2D correlation spectrum in the above region indicates that the amide groups with free carbonyl oxygen appear first and then the unassociated free amide and amide groups with free NH follow as the temperature is increased. (ii) The asynchronous spectrum in the 6000–5500 cm⁻¹ region, where the first overtones of the CH₂ stretching modes are expected to appear, indicates that substantial amount of disordered or dissociated components start appearing before the disappearance of more ordered components. It seems that they appear as the pre-melting precursors (or even possibly as the indirect cause) to the precipitous decrease of the ordered components associated with melting of nylon 12 occurring at a much higher temperature.