Hydroxy peroxy nitrites and nitrates from OH initiated reactions of isoprene

The reaction of hydroxy peroxy radicals (RO(2)) with NO represents one of the most crucial tropospheric processes, leading to terrestrial ozone formation or NO(x)() removal and chain termination. We investigate the formation of hydroxy peroxy nitrites (ROONO) and nitrates (RONO(2)) from the OH-isoprene reactions using DFT and ab initio theories and variational RRKM/master equation (vRRKM/ME) formalism. The binding energies of ROONO from NO addition to RO(2) are determined to be in the range of 20-22 kcal mol(-)(1), and the bond dissociation energies of ROONO to form an alkoxy radical (RO) and NO(2) range from 6 to 9 kcal mol(-)(1). Isomerization of ROONO to RONO(2) is exothermic by 22-28 kcal mol(-)(1). The entrance and exit channels of the RO(2)-NO reaction are found to be barrierless, and the rate constants to form ROONO are calculated to be 3 x 10(-)(12) to 2 x 10(-)(11) cm(3) molecule(-)(1) s(-)(1) using the canonical variational transition state theory. The vRRKM/ME analysis reveals negligible stabilization of excited ROONO and provides an assessment of ROONO isomerization to RONO(2).     

Photochemically catalyzed reaction of ochratoxin A with D- and L-cysteine

The photolysis (>300 nm) of ochratoxin A (OTA, N-[[(3R)-5-chloro-8-hydroxy-3-methyl-1-oxo-7-isochromanyl]carbonyl]-3-phenyl-L-alanine, 1) in the presence of excess (2 and 12 molar equiv) cysteine (CySH) has been investigated and found to yield sulfur adducts 5 and 6 that are characterized by liquid chromatography-mass spectrometry and 1H-NMR spectroscopy. The adduct 5 was ascribed to the Michael addition conjugate resulting from covalent attachment of CySH to the ochratoxin quinone (4) generated by photooxidation of OTA. This species was also formed by photolysis of a synthetic sample of the hydroquinone of OTA (ochratoxin hydroquinone, 3) in the presence of 12 equiv L-CySH. The conjugate 5 derived from photolysis of 3 with L-CySH was used for 1H-NMR analysis. The sulfur adduct 6 was the major species detected from covalent attachment of CySH to photoactivated OTA, and it resulted from direct displacement of the OTA Cl atom by CySH. The implications of the cysteinyl adducts to the in vivo toxicity of OTA are discussed, with particular emphasis given to conjugate 5, as products from the photooxidative pathway may be of relevance to the nephrotoxic properties of OTA.     

Micropatterning of semicrystalline poly(vinylidene fluoride) (PVDF) solutions

Micropatterning of a semicrystalline poly(vinylidene fluoride) (PVDF) solution was performed by a temperature controlled capillary micromolding where the rate of solvent evaporation was controlled by substrate temperature. In order to choose proper solvents for micropatterning, we have investigated the solubility of PVDF in various organic solvents and crystal structures of the PVDF bulk films cast from the solvents. The films prepared from the polar solvents such as dimethylformamide (DMF), dimethyl sulfoxide (DMSO) dominantly showed γ type crystals regardless of preparation temperature, while the films from tetrahydrofuran (THF) exhibit α type crystals and the ones from acetone and methyl ethyl ketone (MEK) show the characteristics of both α- and γ-PVDF. The quality of micropatterns and shapes of the PVDF crystals in the patterns significantly depend on solvent evaporation rates. Micropatterns of PVDF formed in DMF at 120 °C showed the best uniformity in shape. Crystals of the PVDF nucleated at the center regions of microchannels tended to be elongated with the b-axis of γ-PVDF crystals along the channels as the concentration of the solution decreased. In contrast, crystals nucleated at the corner regions of the channels had their b-axis oriented perpendicular to the channels. In line patterns with the width of 2 μm, the corner nucleated crystals were dominant and a resulting bamboo-like crystalline microstructure was observed in which the b-axis of γ-PVDF crystals, fast growth direction, is oriented normal to the microchannels. The crystal structures of the bulk films and the micropatterns were characterized by X-ray diffractometer, Fourier transform infrared spectroscope in Attenuated Total Reflection mode, Polarized Optical and Scanning Electron Microscope.     

Total synthesis and absolute stereochemistry of (9R,10S)-epoxyheptadecan-4,6-diyn-3-one, a diacylglycerol acyltransferase inhibitor from Panax ginseng

Asymmetric synthesis of four possible stereoisomers of (9,10)-epoxyheptadecan-4,6-diyn-3-one was accomplished, and the absolute configuration of the naturally occurring (9R,10S)-epoxyheptadecan-4,6-diyn-3-one (1) was elucidated.     

The absorption of iodine-131 on a ceramic matrix

The retention of ¹³¹I on ceramic rod coated with silver nitrate followed by coating with a polyurethane membrane to be applied in brachytherapy was studied. The concentration of silver nitrate (20 g/l), the volume of ¹³¹I as a sodium iodide solution (100 μl), the pH of the reaction mixture (pH 9) etc., were optimized to get a maximum uptake on the ceramic rod. The concentration of coating solution (5%, polyurethane in tetrahydrofuran) was also optimized to obtain a minimum leaching of ¹³¹I activity in normal saline solution. After coating with a polyurethane membrane, the ¹³¹I absorbed on the ceramic rod exhibited low leachability (0.03%). This method can be applied for the preparation of ¹²⁵I interstitial sources to be used in eye and prostate cancer therapy. This revised version was published online in July 2006 with corrections to the Cover Date.     

A novel and efficient route to diarylmethanes catalyzed by nickel(II) ion on nanoporous carbon

Much improved catalytic carbon-carbon bond-forming reactions between aryl chlorides and Grignard reagents has been achieved using nickel(II) ion on nanoporous carbon.     

Relationship between microhardness and fluorine contents on tooth enamel determined by PIGE analysis

The remineralization effect of fluoride has been measured by surface microhardness on tooth enamel. The purpose of this study was to investigate the relationship between microhardness and fluorine concentration on tooth enamel. Twelve sound bovine enamel specimens were prepared and immersed in 0.05% NaF solution for 1, 3, 6, 24 and 36 hours, respectively. The concentration of fluorine in specimens were measured by PIGE analysis and surface microhardness of each specimen was measured by surface microhardness tester. Fluorine concentration was increased by immersing time. There was no change in microhardness of each specimen by fluorine content. The results of this study suggest that there was no relationship between the fluorine concentration and surface microhardness in sound tooth enamel. PIGE analysis can be used effectively to assess the remineralization effect of fluorine content in tooth enamel.     

Testing shelled corn for aflatoxin, Part III: evaluating the performance of aflatoxin sampling plans

The effects of changes in sample size and/or sample acceptance level on the performance of aflatoxin sampling plans for shelled corn were investigated. Six sampling plans were evaluated for a range of sample sizes and sample acceptance levels. For a given sample size, decreasing the sample acceptance level decreases the percentage of lots accepted while increasing the percentage of lots rejected at all aflatoxin concentrations, and decreases the average aflatoxin concentration in lots accepted and lots rejected. For a given sample size where the sample acceptance level decreases relative to a fixed regulatory guideline, the number of false positives increases and the number of false negatives decreases. For a given sample size where the sample acceptance level increases relative to a fixed regulatory guideline, the number of false positives decreases and the number of false negatives increases. For a given sample acceptance level, increasing the sample size increases the percentage of lots accepted at concentrations below the regulatory guideline while increasing the percentage of lots rejected at concentrations above the regulatory guideline, and decreases the average aflatoxin concentration in the lots accepted while increasing the average aflatoxin concentration in the rejected lots. For a given sample acceptance level that equals the regulatory guideline, increasing the sample size decreases misclassification of lots, both false positives and false negatives.     

Comparative molecular field analysis study of stilbene derivatives active against A549 lung carcinoma

A series of 43 stilbene derivatives that showed cytotoxicity against human lung carcinoma (A549) was analyzed using comparative molecular field analysis (CoMFA) for defining the hypothetic pharmacophore model. The polyoxylated stilbenes were found to be active inhibitors of tubulin polymerization. Several cis-stilbenes are structurally similar to combretastatins. However, the trans-stilbenes are assumed to be close to resveratrol found in grapes and have been reported to be potential cancer chemopreventive agents by modulating the initiation, promotion, and progression of the carcinogenic process. With several synthesized compounds that were evaluated for antitumor cytotoxicity against human lung tumor cells (A549), the stilbene derivatives were subjected to CoMFA. To perform systematic molecular modeling of these compounds, a conformational search was carried out based on the precise dihedral angle analysis of the lead compound (1p). The X-ray crystallographic structure of combretastatin A-1 was also used for defining the active conformers of the compounds. After determining the energy-minimized conformers of the lead compound (1p), CoMFA was performed using five different alignments. The three dimensional (3D)-quantitative structure-activity relationship study resulted in reasonable cross-validated, conventional r(2) values equal to 0.640 and 0.958, respectively.     

A one-pot multicomponent coupling reaction for the stereocontrolled synthesis of (Z)-trisubstituted allylic alcohols

In this Communication, we outline a new one-pot, multicomponent coupling reaction that allows easy access to (Z)-trisubstituted allylic alcohols. Our strategy is based on E to Z isomerization of the 1-bromo-1-dialkylvinylborane upon reaction with dialkylzinc reagents, and subsequent transmetalation to give (Z)-trisubstituted vinylzinc species. In situ trapping of the reactive vinylzinc intermediates with aldehydes furnished a series of (Z)-trisubstituted allylic alcohols. This method represents a viable alternative to the Still-Gennari modification of the HWE olefination reaction, and it has the advantage that it allows coupling of larger fragments.