Variable-precision dominance-based rough set approach and attribute reduction

In this paper, a variable-precision dominance-based rough set approach (VP-DRSA) is proposed together with several VP-DRSA-based approaches to attribute reduction. The properties of VP-DRSA are shown in comparison to previous dominance-based rough set approaches. An advantage of VP-DRSA over variable-consistency dominance-based rough set approach in decision rule induction is emphasized. Some relations among the VP-DRSA-based attribute reduction approaches are investigated.     

Acoustic properties of aortic aneurysm obtained with scanning acoustic microscopy

In aortic aneurysm tissues, macrophages and their secretion of matrix metalloproteinases (MMPs) are playing important role for tissue degeneration. Some studies have shown that weakening of the mechanical properties of the degenerated tissues may progress the expansion of the aneurysm. However, actual measurement of the mechanical properties has not been investigated at microscopic level. The objective of the present study is to assess the mechanical properties of aortic aneurysm tissues by measuring acoustic properties by scanning acoustic microscopy (SAM). Twenty-one cases of aortic aneurysm including renal and common iliac aneurysm tissues were surgically excised. Each tissue was fixed by 4% formaldehyde and the specimens were treated as (1) picrosirius red staining for normal and polarized light microscopy, (2) CD68 staining for macrophage detection, and (3) no staining for acoustic microscopy. A specially developed SAM system operating in the frequency range of 100-200 MHz, was employed in the measurement. Images of amplitude and phase are obtained in a field of 2x2 mm. The intima was mainly consisted of degenerated collagen without polarization of picrosirius red staining. Macrophages stained by CD68 were observed near the degenerated collagen fibers. The sound speed was 1567 m/s in the intima, 1576 m/s in the media, 1640 m/s in the adventitia, respectively. Infiltration of macrophages showed higher values of attenuation and sound speed than the surrounding tissues. The sound speed of the intima was significantly lower than our previous measurement of atherosclerotic aorta without aneurismal change. As the tissue elasticity is closely correlated with the sound speed, the elasticity of the intima was considered to be lower in aneurysm tissues. This mechanical weakness may contribute to the expansion of the diameter of the aneurysm. Acoustic microscopy provided important data for assessing tissue mechanical properties of abdominal aneurysm.     

Benchmark results in vector atmospheric radiative transfer

In this paper seven vector radiative transfer codes are inter-compared for the case of underlying black surface. They include three techniques based on the discrete ordinate method (DOM), two Monte-Carlo methods, the successive orders scattering method, and a modified doubling-adding technique. It was found that all codes give very similar results. Therefore, we were able to produce benchmark results for the Stokes parameters both for reflected and transmitted light in the cases of molecular, aerosol and cloudy multiply scattering media. It was assumed that the single scattering albedo is equal to one. Benchmark results have been provided by several studies before, including Coulson et al. [22], Garcia and Siewert [7], [8], Wauben and Hovenier [10], and Natraj et al. [11] among others. However, the case of the elongated phase functions such as for a cloud and with a high angular resolution is presented here for the first time. Also in difference with other studies, we make inter-comparisons using several codes for the same input dataset, which enables us to quantify the corresponding errors more accurately.     

Effect of a static magnetic field on ion transport in a cellulose membrane

A cellulose membrane was exposed to the static magnetic field (SMF) in the presence of KCl solution and ion transport through the membrane was measured before and after the SMF exposure. SMF at 0.24 T significantly enhanced the rate of ion transport, especially after the first exposure (p<0.05), while the increased ion transport rate did not return to the initial basal level after exchange of the aqueous medium. These results suggest that an irreversible, temporal conformation change took place on the cellulose membrane or on the water bound to the cellulose surface. The accelerating effect of SMF on the ion transport seems to have occurred as a result of stabilized hydration layer on the cellulose surface.     

Ring transformation of pyrimidines to pyridines. Synthesis of 4-alkylaminopyridin-2-ones by alkaline hydrolysis of 6-(2-dimethylaminovinyl)uracils

Alkaline hydrolysis of 1,3-disubstituted 6-(2-dimethylaminovinyl)uracils 2 induced a novel ring transformation giving 4-alkylaminopyridin-2-ones 3 via ring-opening and ring-closure processes. The 4-methylamino-3-nitropyridin-2-one ( 3a ) thus obtained was employed for the synthesis of 3-deazahypoxanthine derivative 8. 4-Alkylamino-3-cyanopyridin-2-ones 11 , ricinine analogs, were also prepared by the reaction of 4-chloro-3-cyano-1-methylpyridin-2-one ( 10 ) with amines.     

Self-similar collapse of 2D and 3D vortex filament models

In this article, a very simple toy model for a candidate blow-up solution of the Euler equation by Boratav and Pelz (vortex dodecapole) is investigated. In this model, vortex tubes are replaced with straight vortex filaments of infinitesimal thickness, and the entire motion is monitored by tracing the motion of a representative point on one vortex filament. It is demonstrated that this model permits a self-similar collapse solution which provides the time dependence of the length scale as (t _c ? t)^1/2, (t < t _c), where the collapse time t _c depends on the initial configuration. From the conservation of circulation, this time dependence implies that vorticity ω scales as (t _c ? t) ^?1, which agrees with the one observed in the direct numerical (pseudo spectral) simulations of the vortex dodecapole. Finally, possible modification of the model is considered.     

An efficient in silico screening method based on the protein-compound affinity matrix and its application to the design of a focused library for cytochrome P450 (CYP) ligands

A new method has been developed to design a focused library based on available active compounds using protein-compound docking simulations. This method was applied to the design of a focused library for cytochrome P450 (CYP) ligands, not only to distinguish CYP ligands from other compounds but also to identify the putative ligands for a particular CYP. Principal component analysis (PCA) was applied to the protein-compound affinity matrix, which was obtained by thorough docking calculations between a large set of protein pockets and chemical compounds. Each compound was depicted as a point in the PCA space. Compounds that were close to the known active compounds were selected as candidate hit compounds. A machine-learning technique optimized the docking scores of the protein-compound affinity matrix to maximize the database enrichment of the known active compounds, providing an optimized focused library.