ISOLATION OF BLEPHARISMIN-BINDING 200 kDa PROTEIN RESPONSIBLE FOR BEHAVIOR IN Blepharisma

Abstract— The ciliated protozoan, Blepharisma, shows an avoidance reaction (step-up photophobic response) in response to light stimulation. A profile of a gel-permeation of a crude detergent-solubilized sample of the cells resulted in several red-colored fractions. Among these blepharismin-containing fractions, the fractions III-V did not contain amino acids. The peak of fraction II monitored by 580 nm absorbance was much smaller. A prominent peak appeared in fraction I, which contained a large amount of amino acids. The absorption spectrum of fraction I was well fitted to the action spectrum of the step-up photophobic response, although free pigment (blepharismin) also fitted. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis of this fraction resulted in a thicker band corresponding to molecular mass of 200 kDa. These results suggest that the 200 kDa chromoprotein (blepharismin-protein complex) is responsible for the step-up photophobic response in Blepharisma. The absorption spectrum of free chromophore dissociated from the chromophore-protein complex was identical to free red pigment termed blepharismin. The absorption spectrum of the other fractions agreed with that of thin-layer chromatography-purified red pigment, indicating that the pigments contained in these fractions are free pigment dissociated from the chromophore-protein complex.     

A single-strand conformation polymorphism method for the large-scale analysis of mutations/polymorphisms using capillary array electrophoresis

We present a high-throughput single-strand conformation polymorphism (SSCP) method, performed on a commercially available capillary array DNA sequencer. We tested various sieving matrices and electrophoretic conditions, using 51 DNA fragments which included 45 fragments carrying only one single nucleotide polymorphism (SNP), 4 fragments having two SNPs and 2 fragments with insertion or deletion. Resolution of alleles was improved by increasing concentrations of both sieving matrices and buffers, and all examined polymorphisms of DNA fragments were detected, most of them (45 fragments) as clearly split allele peaks in heterozygotes. Allele frequencies of SNPs can be estimated accurately by determining the relative amounts of alleles in pooled DNA. In this method, the turn-around time for the analysis of 96 samples is less than 3 h. These results demonstrate that capillary array-based SSCP is an efficient and accurate technique for the large-scale quantitative analysis of mutations/polymorphisms.     

Organelle sensor: amperometric determination of nadh by immobilized mitochondrial electron transport particles

A new sensor for NADH was developed by making use of an immobilized subcellular organelle. Mitochondria was used as a model system for assembling an organelle sensor. Mitochondrial electron transport particles (ETP) were prepared from beef heart muscle and entrapped in the membrane formed of agar gel. The membrane-bound ETP was found capable of NADH oxidation: $$NADH + \tfrac{1}{2}O_2 + H^ + \xrightarrow{{ETP}}NAD^ - + H_2 O$$ The membrane was tightly attached to the surface of an oxygen electrode capable of amperometric detection of O2. The sensor responded to NADH in solution with a resulting electric output. The response was enhanced by the addition of 2,4-dinitrophenol (DNP). NADH was determined in the concentration range 1–300 µM. NADH was alternatively determined for 2 weeks without replacing the ETP-bound membrane.     

Studies on the polymerization of bifunctional monomers. XVI. Cyclopolymerization of o-divinylbenzene with triphenylmethyl fluoroborate and presumption of the presence of the free growing cation in this system

Cyclopolymerization of o-divinylbenzene was studied by using triphenylmethyl fluoroborate as initiator. The cyclization constant r_c (ratio of the rate constant for intramolecular cyclization to that for intermolecular propagation) decreased with increase in polarity of the solvent. This solvent effect as well as the effect of catalysts reported previously could be accounted for by a revised model of the propagating species, where both the counter anion and the o-vinyl group were coordinated to the carbonium ion. The difference in activation energy between intramolecular cyclization and intermolecular propagation was 6.2 kcal/mole. This value was close to that obtained previously with BF₃·OEt₂ catalyst but greater than those for anionic and radical polymerizations. When tetraalkylammonium flouroborates were added to the polymerization system in methylene chloride, r_c and the molecular weight of the polymer decreased. These results were ascribed to the decrease in the amount of the free propagating cation by the common ion effect.     

The Weibull-log Weibull transition of the interoccurrence time statistics in the two-dimensional Burridge-Knopoff Earthquake model

In analyzing synthetic earthquake catalogs created by a two-dimensional Burridge-Knopoff model, we have found that a probability distribution of the interoccurrence times, the time intervals between successive events, can be described clearly by the superposition of the Weibull distribution and the log-Weibull distribution. In addition, the interoccurrence time statistics depend on frictional properties and stiffness of a fault and exhibit the Weibull-log Weibull transition, which states that the distribution function changes from the log-Weibull regime to the Weibull regime when the threshold of magnitude is increased. We reinforce a new insight into this model; the model can be recognized as a mechanical model providing a framework of the Weibull-log Weibull transition.     

Size-exclusion chromatography combined with small-angle X-ray scattering optics

Size-exclusion chromatography with on-line synchrotron radiation solution small-angle X-ray scattering optics, absorbance and/or refractive index detectors was evaluated by protein characterizations. The radius of gyration value and zero-angle scattering intensity of protein molecules eluted from the chromatography column were estimated using this measurement system. In addition, the characterization of the conformation of the eluted proteins was demonstrated for hen egg lysozyme and bovine submaxillary mucin. The present technique will be useful for not only the determination of the radius of gyration value and molecular weight of proteins with dimensions of 1–10 nm, but also for the structural characterization of the macromolecules during the chromatography.