A Practical System for High-Throughput Screening of Mutants of <Emphasis Type="Italic">Bacillus fastidiosus</Emphasis> Uricase

For high-throughput screening (HTS) of Bacillus fastidiosus uricase mutants, a practical system was proposed. By error-prone PCR with final 1.5 mM MnCl₂, two focused libraries of mutants for A1-V158 and V150-D212 were generated separately. After induced expression of individual clones in 48-well microplates, Escherichia coli cells (BL21) were lyzed by 1.0 M Tris-HCl at pH 9.0 in 96-well microplates at 25 °C for 7.5 ~ 10.5 h; uricase reaction was continuously monitored with 0.15 mM uric acid in 96-well plates by absorbance at 298 nm to estimate V _m/K _m by kinetic analysis of reaction curve for comparison. V _m/K _m was resistant to initial uric acid levels with an upper limit 3-fold over that of initial rates. By receiver-operator-characteristic analysis of the recognition of the one of higher activity in uricase pair whose specific activity ratio was 1.8 or 3.3, the area-under-the-curve was comparable to that with cell lysates prepared by sonication treatment. A cutoff for the maximum Youden index was thus developed to recognize positive mutants of 1-fold higher activity. Indeed, mutant L171I/Y182F/Y187F/A193S of higher activity but lower thermostability at pH 7.4 and mutant V144A of higher activity and consistent thermostability were discovered. Therefore, the proposed system was practical for HTS of uricase mutants.     

Effects of pH and Carbon Source on <Emphasis Type="Italic">Synechococcus</Emphasis> PCC 7002 Cultivation: Biomass and Carbohydrate Production with Different Strategies for pH Control

Synechococcus PCC 7002 is an interesting species in view of industrial production of carbohydrates. The cultivation performances of this species are strongly affected by the pH of the medium, which also influences the carbohydrate accumulation. In this work, different methods of pH control were analyzed, in order to obtain a higher production of both Synechococcus biomass and carbohydrates. To better understand the influence of pH on growth and carbohydrate productivity, manual and automatic pH regulation in CO₂ and bicarbonate system were applied. The pH value of 8.5 resulted the best to achieve both of these goals. From an industrial point of view, an alternative way to maintain the pH practically constant during the entire period of cultivation is the exploitation of the bicarbonate-CO₂ buffer system, with the double aim to maintain the pH in the viability range and also to provide the amount of carbon required by growth. In this condition, a high concentration of biomass (6 g L^?1) and carbohydrate content (around 60 %) were obtained, which are promising in view of a potential use for bioethanol production. The chemical equilibrium of C-N-P species was also evaluated by applying the ionic balance equations, and a relation between the sodium bicarbonate added in the medium and the equilibrium value of pH was discussed.     

Population Genetic Structure and Marker Trait Associations Using Morphological,Phytochemical and Molecular Parameters in <Emphasis Type="Italic">Habenaria edgeworthii</Emphasis>—a Threatened Medicinal Orchid of West Himalaya,India

Habenaria edgeworthii Hook. f. ex Collett is an important terrestrial orchid used in different Ayurvedic formulations. In the present study, variations among morphological, phytochemical and molecular markers were assessed. A significant difference was observed among populations using morphological traits. Inter-simple sequence repeat (ISSR) data revealed lower genetic diversity at population level (He = 0.207) as compared to species level (He = 0.334). Analysis of molecular variance (AMOVA) indicates 74 % variation among populations and 26 % within population. Tuber extracts showed significantly (p < 0.05) higher total phenolics and flavonoids among the populations. Antioxidant activity determined by 2,2′-azinobis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS) radical scavenging, 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging and ferric reducing antioxidant power (FRAP) assays exhibited considerable antioxidant potential. Furthermore, the associations between molecular and morphological and phytochemical attributes were studied using multiple regression analysis (MRA). Several ISSR fragments were associated with some morphological and phytochemical traits. These ISSR fragments can be useful for breeding programme of the species when no other genetic information, such as linkage maps and quantitative trait loci, is available.     

Research on the Effect of Dielectric Barrier Discharge (DBD) Plasma Remote Treatment on Drag Force of Polyethylene Terephthalate (PET) Yarns in Air Flow with Different Humidities

In this paper, long-lived free radicals in atmospheric-pressure DBD plasma were used to treat PET yarn surface. Subsequently, the drag force of treated yarns in air flow at four humidities (40 ± 3, 50 ± 3, 60 ± 3, 70 ± 3%) was measured. The results suggest that with the increase of flow humidity, the air drag force of untreated yarn decreased while that of plasma-treated ones on average increased gradually. The average growth rates of the drag force under each humidity were 5.33, 7.58, 10.08 and 12.28% respectively. Meanwhile, the air drag force of the yarns treated at different specific input energy (SIE) densities and treatment time varied obviously under different flow humidity. The X-ray photoelectron spectroscopy analysis was performed to characterize the yarn surfaces chemically. The topology and roughness of PET yarns were measured by atomic force microscopy. The tensile test was carried out to characterize the mechanical strength. The ozone, nitrate and nitrite radicals and total organic carbon in tail gas of plasma were also analyzed. The maximal atomic concentration of N element on PET surface could reach 8.0%. The obtained results can improve the understanding of the property of long-lived reactive species from DBD plasma source generated at different SIE and the difference in PET surface etching and modification during remote treatment at different SIE. Moreover, the results also provide an experimental guideline for the improvement of weaving efficiency in air-jet weaving.     

Molecular Cloning and Characteristic Features of a Novel Extracellular Tyrosinase from <Emphasis Type="Italic">Aspergillus niger</Emphasis> PA2

Biofertilizers have been widely used in many countries for their benefit to soil biological and physicochemical properties. A new microbial biofertilizer containing Phanerochaete chrysosporium and Bacillus thuringiensis was prepared to decrease nicotine content in tobacco leaves by regulating soil nitrogen supply. Soil NO₃ ^?-N, NH₄ ⁺-N, nitrogen supply-related enzyme activities, and nitrogen accumulation in plant leaves throughout the growing period were investigated to explore the mechanism of nicotine reduction. The experimental results indicated that biofertilizer can reduce the nicotine content in tobacco leaves, with a maximum decrement of 16–18 % in mature upper leaves. In the meantime, the total nitrogen in mature lower and middle leaves increased with the application of biofertilizer, while an opposite result was observed in upper leaves. Protein concentration in leaves had similar fluctuation to that of total nitrogen in response to biofertilizer. NO₃ ^?-N content and nitrate reductase activity in biofertilizer-amended soil increased by 92.3 and 42.2 %, respectively, compared to those in the control, whereas the NH₄ ⁺-N and urease activity decreased by 37.8 and 29.3 %, respectively. Nitrogen uptake was improved in the early growing stage, but this phenomenon was not observed during the late growth period. Nicotine decrease is attributing to the adjustment of biofertilizer in soil nitrogen supply and its uptake in tobacco, which result in changes of nitrogen content as well as its distribution in tobacco leaves. The application of biofertilizer containing P. chrysosporium and B. thuringiensis can reduce the nicotine content and improve tobacco quality, which may provide some useful information for tobacco cultivation.     

Transport Coefficients of Two-temperature Lithium Plasma for Space Propulsion Applications

Lithium has been proposed as an attractive metal propellant for advanced electric propulsion. In our current work, transport coefficients including the viscosity, thermal conductivity, and electrical conductivity of lithium plasma under both the equilibrium and non-equilibrium conditions are calculated based on a two-temperature model. The collision integrals used in calculating the transport coefficients are significantly more accurate than values used in previous theoretical studies, resulting in more reliable values of the transport coefficients. Results are computed for different degrees of thermal non-equilibrium, i.e. the ratio of electron to heavy particle temperatures, from 1 to 15, with the electron temperature ranging from 300 to 60,000 K in a wide pressure range from 0.0001 to 100 atm. We compare our calculated results with existing published results and discrepancies are found and explained.     

Thermophilic Dry Methane Fermentation of Distillation Residue Eluted from Ethanol Fermentation of Kitchen Waste and Dynamics of Microbial Communities

Thermophilic dry methane fermentation is advantageous for feedstock with high solid content. Distillation residue with 65.1 % moisture content was eluted from ethanol fermentation of kitchen waste and subjected to thermophilic dry methane fermentation, after adjusting the moisture content to 75 %. The effect of carbon to nitrogen (C/N) ratio on thermophilic dry methane fermentation was investigated. Results showed that thermophilic dry methane fermentation could not be stably performed for >10 weeks at a C/N ratio of 12.6 and a volatile total solid (VTS) loading rate of 1 g/kg sludge/d; however, it was stably performed at a C/N ratio of 19.8 and a VTS loading rate of 3 g/kg sludge/d with 83.4 % energy recovery efficiency. Quantitative PCR analysis revealed that the number of bacteria and archaea decreased by two orders of magnitude at a C/N ratio of 12.6, whereas they were not influenced at a C/N ratio of 19.8. Microbial community analysis revealed that the relative abundance of protein-degrading bacteria increased and that of organic acid-oxidizing bacteria and acetic acid-oxidizing bacteria decreased at a C/N ratio of 12.6. Therefore, there was accumulation of NH₄ ⁺ and acetic acid, which inhibited thermophilic dry methane fermentation.     

Polytetrafluoroethylene Sputtered PES Membranes for Membrane Distillation: Influence of RF Magnetron Sputtering Conditions

Thin films of fluorocarbon were deposited on polyethersulfone membranes via argon plasma sputtering of a poly(tetrafluoroethylene) (PTFE) target in an RF magnetron plasma reactor. The obtained deposited ultrathin coatings had nanoscale roughnesses and high degrees of fluorination. The intensity of fluorine atom in plasma environment during fluorocarbon deposition was investigated. Depending on the deposition conditions comprising working gas pressure, applied RF power, and distance between the target and the substrate, polymeric films with different chemical compositions and/or morphologies were obtained. The morphologies of the films were analyzed by means of SEM, XPS, and AFM. The results suggested that the sputtered film deposited at a higher pressure and longer target–substrate distance and moderate RF power had a surface composition and chemical structure closer to those of the PTFE film. The treated hydrophobic PES membranes with water contact angles as high as 115° were applied for the first time in an air gap membrane distillation setup for removal of benzene as a volatile organic compound from water. The results showed that the plasma-treated membranes have a comparable or superior performance to that of commercial PTFE used in membrane distillation with similar permeate flux and separation factor after 20 h long term performance.     

A Study of the Influence of the Surrounding Gas on the Plasma Jet and Coating Quality During Plasma Spraying

Coating quality is affected by arc and plume instabilities during plasma spraying. In closed chamber plasma spraying, gradual drift is one of the intermediate instabilities, which is mainly due to the electrode erosion. This work focuses on the source of the gradual drift of the plasma jet and the influence on coating quality. The ambient state inside the chamber was controlled by a ventilation system and a vacuum system. The variation in the plasma jet was observed by a particle flux image device based on a CCD camera. The optical spectrum of the plasma plume was measured and analyzed through an optical spectrometer. The results indicated that the addition of hydrogen to plasma gas induced the change in the plasma jet length and width with changing rates depending on the chamber state and the ventilation power. With poor ventilation, the intensity of H_α emission was found to become gradually stronger while H_β and H_γ were found to become weaker. On closing the chamber and retaining enough ventilation power, it was observed that the ambient gas slowly turned red. Simultaneously, the coating weight and thickness were slightly decreased meanwhile the porosity ratio was obviously increased. The red ambient gas has been proved to be able to acidify the city water with pH value decreased from 7 to 1–3. Without hydrogen, the plasma jet was found to be stable without reddening and variation, but the plasma enthalpy was unfortunately low.     

A Method for Microalgae Proteomics Analysis Based on Modified Filter-Aided Sample Preparation

With the fast development of microalgal biofuel researches, the proteomics studies of microalgae increased quickly. A filter-aided sample preparation (FASP) method is widely used proteomics sample preparation method since 2009. Here, a method of microalgae proteomics analysis based on modified filter-aided sample preparation (mFASP) was described to meet the characteristics of microalgae cells and eliminate the error caused by over-alkylation. Using Chlamydomonas reinhardtii as the model, the prepared sample was tested by standard LC-MS/MS and compared with the previous reports. The results showed mFASP is suitable for most of occasions of microalgae proteomics studies.