Molecular dynamics modeling in quantum chemical calculations. Optical absorption spectra of 1,3-Dimethyl-1H-Pyrazolo[3,4-b]quinoline derivatives

Paper presents the quantum chemical modeling of the optical absorption spectra of 6-fluoro, 6-bromo, 7-trifluoromethyl, 6-cyano and 6-carboethoxy derivatives of 1,3-Dimethyl-1H-Pyrazolo[3,4-b]quinoline. The calculations are performed by means of the semiempirical quantum chemical methods (AM1 or PM3) in combination with molecular dynamics (MD) simulations at T=300 K. It is shown that a particular rotational dynamics of the methyl, trifluoromethyl or ethyl groups practically does not influence the optical absorption in the spectral range 200-500 nm whereas broadening of absorption bands may be well reproduced within MD simulations including all types of nuclei vibrations. The results of calculations are compared with the measured spectra of optical absorption. The quantum chemical method AM1 in combination with MD simulations gives for all dyes the best agreement between the calculated and measured spectral positions of the first absorption band (absorption threshold).     

Interactions of native and modified cyclodextrins with some B-vitamins

Interactions of native and modified α- and β-cyclodextrins with nicotinic acid, pyridoxine and pyridoxal were studied by isothermal titration calorimetry, solution calorimetry, and ¹H NMR spectroscopy at 298.15 K and pH 6.8. Weak 1:1 complex formation was found only between α-cyclodextrin and nicotinic acid. The stability constant and corresponding thermodynamic parameters of complex formation (Δ_c G, Δ_c H and Δ_c S) were calculated using the calorimetric data. The ¹H NMR data indicate the shallow insertion of the carboxylic group of the nicotinic acid molecule into α-CD cavity. For all other compounds the weak interactions, not accompanied by complex formation, were characterized by the enthalpic virial coefficients calculated on the basis of McMillan-Mayer approach. The obtained thermodynamic parameters were analyzed in the terms of influence of the solutes’ structure on the selectivity of intermolecular host-guest interactions.     

Magnesium ion selective two-photon fluorescent probe based on a benzo[h]chromene derivative for in vivo imaging

A novel, two-photon probe for the detection of free Mg2+ ions in living cells and live tissues has been developed. The probe can be excited by 880 nm laser photons, emits strong two-photon excited fluorescence in response to Mg2+ ions, can be easily loaded into the cell and tissue, shows high photostability, and can measure the Mg2+ ion concentration without interference by Ca2+ ions in living cells. The intracellular dissociation constant (Kdi) for Mg2+ determined by the two-photon process is 2.5 mM, which is suitable for dynamic Mg2+ concentration measurement. In addition, the probe is capable of imaging endogenous stores of free Mg2+ at a few hundred micrometers depth in live tissues using two-photon microscopy (TPM).     

Preparation and characterization of pure and mixed monolayers of poly(ethylene glycol) brushes chemically adsorbed to silica surfaces

We prepared pure and mixed monolayers of methoxy-terminated poly(ethylene glycol)s (m-PEG's) chemically attached to silica surfaces by using m-PEG silane coupling agents of three different molecular weights. These films were subsequently characterized in water by atomic force microscopy (AFM). Images of pure m-PEG monolayers showed the formation of polymer brushes on silica. Force curves between two modified surfaces suggested that an increase in the number of oxyethylene (OE) groups from 6 (PEG6 surface) to 43 (PEG43 surface) to 113 (PEG113 surface) decreased the flexibility of the m-PEG chains in the m-PEG brushes. Frictional force measurements also showed that the friction increased in the order PEG6 < PEG43 相似文献   

Isothermal vapor–liquid equilibria for binary mixtures of benzene, toluene, m-xylene, and N-methylformamide at 333.15 K and 353.15 K

Isothermal vapor–liquid equilibrium (VLE) at 333.15 K and 353.15 K for four binary mixtures of benzene + toluene, benzene + N-methylformamide, toluene + m-xylene and toluene + N-methylformamide have been obtained at pressures ranged from 0 kPa to 101.3 kPa. The NRTL, UNIQUAC and Wilson activity coefficient models have been employed to correlate experimental pressures and liquid mole fractions. The non-ideal behavior of the vapor phase has been considered by using the Soave–Redlich–Kwong equation of state in calculating the vapor mole fraction. Liquid and vapor densities were also measured by using two vibrating tube densitometers. The P–x–y diagram and the activity coefficient indicate that two mixtures of benzene + toluene and toluene + m-xylene were close to the ideal solution. However, two mixtures containing N-methylformamide present a large positive deviation from the ideal solution. The excess Gibbs energy in the benzene + toluene mixture is negative indicates that it is an exothermic system.     

Structural diversity in native cyclodextrins/folic acid complexes--from [2]-rotaxane to exclusion compound

The formation of different complexes of folic acid depending on the size of the host cyclodextrin resulting in either an exclusion compound (with the smallest α-cyclodextrin) or 2-rotaxane, where cyclodextrin is threaded over folic acid (with β- and γ-cyclodextrins), is presented. The formation is carried out in water which allows both possible application in pharmaceutical sciences and usage of environmentally friendly "green chemistry". The obtained compounds are thoroughly characterized using one and two dimensional NMR, mass spectrometry, differential scanning calorimetry and thermogravimetric analysis.     

Theoretical study of solvent effect on π-EDA complexation II. Complex between TCNE and two benzene molecules

Formation of tetracyanoethylene—benzene 1: 1 and 1: 2 complexes was modeled using the Møller—Plesset second-order theory (MP2) and polarized continuum model (PCM). The MP2 calculated geometry of 1: 1 complex presents a plane-parallel C _2υ sandwich structure with interplanar distance 3.05 × 10^?10 m, while the 1: 2 complex has D _2h geometry where the planparallel distance is equal to 3.09 × 10^?10 m. The MP2 calculations indicate that the main part of formation enthalpy in both complexes is dispersion energy due to intermolecular electron correlation. The calculations also show that the formation entropy destabilizes both complexes since from the two constituent molecules one complex molecule arises. The MP2/6-31G* procedure showed to be a suitable tool for the estimation of the relative importance of 1: 2 complexation compared to the 1: 1 complexation. In the gas phase the ratio of the equilibrium constants of both complexes K _1:2/K _1:1 = 0.09 was calculated. The presence of solvent, treated by the PCM, further destabilized the 1: 2 complex with respect to the 1: 1 complex. The ratio K _1:2/K _1:1 in CH₂Cl₂ calculated by the PCM method was 0.022, i.e. the 1: 2 complex was almost 50 times less stable than the 1: 1 complex, which is in agreement with available experimental data. According to the calculations, solvent always destabilizes complex with respect to the isolated (solvated) components.It was also found that charge polarization in the 1: 2 complex with respect to that in the 1: 1 complex was not strictly additive due to the presence of the second benzene molecule in the 1: 2 complex. Non-additive were also formation enthalpy, entropy, polarizability, charge transfer from donors to acceptor molecule and other properties. This fact is caused by a slightly changed interaction between constituent molecules in the 1: 2 complex in comparison with the 1: 1 complex as well as by the interaction between benzene molecules in the 1: 2 complex which is missing in the 1: 1 complex.Preliminary CIS/6-31G* theoretical study regarding a few first-electron (electron charge transfer) transitions in both complexes indicates the presence of Frenkel excitn and Davydov transition energy splitting in the 1: 2 “supercomplex” with the first allowed π → π* absorption transition at λ = 355 nm, while the first allowed transition in the case of 1: 1 complex was characterized by λ = 392 nm with the oscillator strength only half of that of the 1: 2 complex, which is in agreement with experiment. These unexpected large hypso-and hypochromic effects predicted by the theory could allow to overcome difficulties of the experimental determination of the 1: 2 complexation.     

Rapid determination of 226Ra in drinking water samples using dispersive liquid-liquid microextraction coupled with liquid scintillation counting

A new radioanalytical method was developed for rapid determination of ²²⁶Ra in drinking water samples. The method is based on extraction and preconcentration of ²²⁶Ra from a water sample to an organic solvent using a dispersive liquid-liquid microextraction (DLLME) technique followed by radiometric measurement using liquid scintillation counting. In DLLME for ²²⁶Ra, a mixture of an organic extractant (toluene doped with dibenzo-21-crown-7 and 2-theonyltrifluoroacetone) and a disperser solvent (acetonitrile) is rapidly injected into the water sample resulting in the formation of an emulsion. Within the emulsion, ²²⁶Ra reacts with dibenzo-21-crown-7 and 2-theonyltrifluoroacetone and partitions into the fine droplets of toluene. The water/toluene phases were separated by addition of acetonitrile as a de-emulsifier solvent. The toluene phase containing ²²⁶Ra was then measured by liquid scintillation counting. Several parameters were studied to optimize the extraction efficiency of ²²⁶Ra, including water immiscible organic solvent, disperser and de-emulsifier solvent type and their volume, chelating ligands for ²²⁶Ra and their concentrations, inorganic salt additive and its concentration, and equilibrium pH. With the optimized DLLME conditions, the accuracy (expressed as relative bias, B _r ) and method repeatability (expressed as relative precision, S _B ) were determined by spiking ²²⁶Ra at the maximum acceptable concentration level (0.5 Bq L⁻¹) according to the Guidelines for Canadian Drinking Water Quality. Accuracy and repeatability were found to be less than −5% (B _r ) and less than 6% (S _B ), respectively, for both tap water and bottled natural spring water samples. The minimum detectable activity and sample turnaround time for determination of ²²⁶Ra was 33 mBq L⁻¹ and less than 3 h, respectively. The DLLME technique is selective for extraction of ²²⁶Ra from its decay progenies.     

Structure and magnetism of Co(II) complexes with bidentate heterocyclic ligand Hsalbim derived from benzimidazole

Two mononuclear Co(II) complexes based upon 2-(1H-benzimidazol-2-yl)phenol, abbreviation Hsalbim ligand, have been prepared and studied. The structure of Hsalbim and [Co(salbim)₂] have been confirmed by X-ray structure analysis. The second cobalt(II) complex matches the formula [Co(salbim)₂]·(Hsalbim)·MeOH assuming a co-crystallization of one neutral ligand. The electronic spectra are consistent with the tetrahedral pattern. Magnetic susceptibility measurements down to T = 2 K along with the magnetization data until B = 7 T show that the Co(II) complexes are high-spin with a considerable zero-field splitting of the ⁴B₁(D_2d) term: D/hc = 67 and 55 cm⁻¹, respectively.     

Synthesis of Lignans Based on a Borate-mediated One-pot Sequential Suzuki-Miyaura Coupling of Cyclic Boranes

Lignans are a group of polyphenolic phytochemicals that possess a large spectrum of chemical structures and biological activities. Here the syntheses of lignans – anwulignan, burseran, dehydroxycubebin, ruburisandrin B, and sesamin – are achieved based on a borate-mediated one-pot sequential Suzuki-Miyaura coupling of cis- and trans-fused bicyclic boranes, which were prepared by diastereoselective cyclic hydroboration of exo-cyclic diene with cyclopentyl- and thexylboranes, respectively. A one-pot sequential Suzuki-Miyaura coupling of each cyclic borate with various aryl bromides initiated by activation of the cyclic borane with the carbon nucleophile provided 2,3-dibenzylbutane derivatives with different aromatic substituents. Finally, the syntheses of naturally occurring lignans were accomplished in several steps from the products of Suzuki-Miyaura coupling.