Spectral polarimetry with a differential group delay bias

We show that the addition of a polarization controller and bias differential group delay to a spectral polarimeter increases the amount of polarization information that can be extracted from a Stokes spectrum measurement. We use this biased spectral polarimetry on 40-Gbit/s signals to measure the polarization mode dispersion of the optical fiber through which they propagate. Our measurements do not require any control of the polarization at the fiber input. Averaging measurements from several settings of the polarization controller yields improved accuracy, and, after data rejection is applied, both the accuracy and the number of valid data points is increased when using several measurements.     

Single molecule fluorescence detection of BODIPY-FL molecules for monitoring protein synthesis

We have observed single DNA strands labeled with a small fluorescent molecule, BODIPY-FL, using objective based total internal fluorescence microscopy. In spite of its photobleaching, this small fluorophore is potentially useful for monitoring biochemical processes like protein synthesis because it can be efficiently incorporated into proteins by the ribosome through a charged epsilon-labeled fluorescent lysine tRNA. Using evanescent wave laser excitation at 488 nm, we have been able to observe single Bodipy molecules using integration times as low as 20 ms with a good signal to noise ratio, and for several images before photobleaching. We have measured the fluorescence decay due to photobleaching and have been able to lengthen it by a factor of 5 using oxygen scavenger systems.     

Miniature radio-frequency mobility analyzer as a gas chromatographic detector for oxygen-containing volatile organic compounds, pheromones and other insect attractants

A high electric field, radio-frequency ion mobility spectrometry (RF-IMS) analyzer was used as a small detector in gas chromatographic separations of mixtures of volatile organic compounds including alcohols, aldehydes, esters, ethers, pheromones, and other chemical attractants for insects. The detector was equipped with a 2 mCi 63Ni ion source and the drift region for ion characterization was 5 mm wide, 15 mm long and 0.5 mm high. The rate of scanning for the compensation voltages was 60 V s(-1) and permitted four to six scans to be obtained across a capillary chromatographic elution profile for each component. The RF-IMS scans were characteristic of a compound and provided a second dimension of chemical identity to chromatographic retention adding specificity in instances of co-elution. Limits of detection were 1.6-55 x 10(-11) g with an average detection limit for all chemicals of 9.4 x 10(-11) g. Response to mass was linear from 2-50 x 10(-10) g with an average sensitivity of 4 pA ng(-1). Separations of pheromones and chemical attractants for insects illustrated the distinct patterns obtained from gas chromatography with RF-IMS scans in real time and suggest an analytical utility of the RF-IMS as a small, advanced detector for on-site gas chromatographs.     

Microemulsion Polymerization: An Undergraduate Experiment in the Synthesis of Nanosized Polystyrene Particles

The synthesis of polystyrene nanoparticles through microemulsion polymerization is presented as an undergraduate advanced organic laboratory exercise. The resultant polymers molecular weight and particle size are studied as a function of monomer and initiator concentration. A comparison of cationic vs. anionic surfactants, and their effects on the polymer produced through microemulsion polymerization are also investigated. A direct relationship is observed between molecular weight and monomer concentration. A direct relationship is also found for the particle size of the latex produced. An inverse relationship is observed for molecular weight and particle size as the initiator concentration was raised. Comparison of molecular weight and latex size for cationic and anionic surfactants demonstrates that the anionic surfactant produces both a higher molecular weight and a larger latex size over the entire monomer and initiator concentration ranges.     

Zooming-in on the proteome: very narrow-range immobilised pH gradients reveal more protein species and isoforms

Two-dimensional gel electrophoresis (2-DE) enables separation of complex mixtures of proteins on a single polyacrylamide gel according to isoelectric point, molecular weight, solubility, and relative abundance. For this reason, 2-DE together with mass spectrometry (MS) has become a key technology in proteome analysis. The introduction of immobilised pH gradients (IPGs) for isoelectric focusing of proteins affords improved reproducibility and permits full-scale proteome analyses to be undertaken. Whilst broad-range IPGs are useful for investigating simple proteomes (e.g. Mycoplasma genitalium) it is becoming clear that additional resolving power is needed for separating the more complex proteomes of eukaryotic organisms. The use of narrow-range and very narrow-range IPGs provides the means with which to dissect a complex proteome. We have compared very narrow-range IPGs (3.5-4.5L, 4-5L, 4.5-5.5L, 5-6L, and 5.5-6.7L) with broad- (3-10NL) and narrow-range IPGs (4-7L and 6-9L) for the visualisation of the human heart proteome. The superior ability of very narrow-range IPGs to separate different protein species and isoforms, compared with 3-10NL and 4-7L 2-D gels is demonstrated. The results are supported by MS identifications which further show that reduction of the number of comigrating protein species results in less ambiguous and more reliable database search results.     

Visible continuum generation using a femtosecond erbium-doped fiber laser and a silica nonlinear fiber

Supercontinuum extending to visible wavelengths is generated in a hybrid silica nonlinear fiber pumped at 1560 nm by a femtosecond, erbium-doped fiber laser. The hybrid nonlinear fiber consists of a short length of highly nonlinear, germano-silicate fiber (HNLF) spliced to a length of photonic crystal fiber (PCF). A 2 cm length of HNLF provides an initial stage of continuum generation due to higher-order soliton compression and dispersive wave generation before launching into the PCF. The visible radiation is generated in the fundamental mode of the PCF.     

Anharmonic Vibrational Frequencies of Water Borane and Associated Molecules

Water borane (BH3OH2) and borinic acid (BH2OH) have been proposed as intermediates along the pathway of hydrogen generation from simple reactants: water and borane. However, the vibrational spectra for neither water borane nor borinic acid has been investigaged experimentally due to the difficulty of isolating them in the gas phase, making accurate quantum chemical predictions for such properties the most viable means of their determination. This work presents theoretical predictions of the full rotational and fundamental vibrational spectra of these two potentially application-rich molecules using quartic force fields at the CCSD(T)-F12b/cc-pCVTZ-F12 level with additional corrections included for the effects of scalar relativity. This computational scheme is further benchmarked against the available gas-phase experimental data for the related borane and HBO molecules. The differences are found to be within 3 cm−1 for the fundamental vibrational frequencies and as close as 15 MHz in the B0 and C0 principal rotational constants. Both BH2OH and BH3OH2 have multiple vibrational modes with intensities greater than 100 km mol−1, namely ν2 and ν4 in BH2OH, and ν1, ν3, ν4, ν9, and ν13 in BH3OH2. Finally, BH3OH2 has a large dipole moment of 4.24 D, which should enable it to be observable by rotational spectroscopy, as well.     

A focussing funnel for metastable helium

We have constructed a magneto-optical funnel for He atoms and studied its properties using a laser cooled, highly mono-energetic atomic beam. A simple model of its action allows us to quantitatively understand the observed spot size and “focal length”. We show that for a fast beam, the velocity damping coefficient plays an important role in determining the focal length of the device. The observed spot size is limited mainly by transverse heating processes which impose a transverse velocity spread. The device also permits easy scanning of the focussed spot. Received 30 October 1998 and Received in final form 27 January 1999