Alkane Shape- and Size-Recognized Selective Vapor Sorption in “Channel-Like” Crystals Based on Thiacalixarene Assemblies

Alkanes composed of C−C and C−H show a low electric polarization, and therefore, there is only very weak interaction between alkanes and adsorbents. Thus, it is difficult to separate a specific alkane from a mixture of alkanes by adsorption. Here, two activated “channel-like” crystals generated from brominated thiacalix[4]arene propyl ethers, which adopt 1,3-alternate and partial cone conformations, recognize specific alkane vapors depending on alkane-shape and -size, sorting in three-type alkane guests such as linear, branched, and cyclic alkanes. Two activated crystals, which are prepared by removal of solvent upon heating under reduced pressure, incorporate branched and/or cyclic alkane vapors by a unique “gate-opening” mechanism via a crystal transformation in the process. Linear alkane vapors do not trigger gate opening and are not taken up by the activated crystals. The shape and size molecular-recognition properties of the activated crystals promises considerable usefulness for the separation of linear, branched, and cyclic alkanes.     

Highly Selective Asymmetric Intramolecular Selenocyclisation

Asymmetric intramolecular selenocyclisation of alkenoic acids, alkenols and alkenyl urethanes using chiral ferrocenylselenenyl cations proceeds smoothly to give the corresponding lactones, cyclic ethers and N-heterocyclic compounds, respectively, in moderate yields with very high diastereoselectivities.     

Chiral Bis(oxazoline)-copper Catalyzed Enantioselective Imidation of Sulfides

Prochiral sulfides reacted with Phl=NTs in the presence of a catalytic amount of Cu(I) salt together with a chiral 4,4′-disubstituted bis(oxazoline) ligand to afford the corresponding chiral sulfimides.     

Stereodivergent Synthesis and Stereochemical Reassignment of the C79–C104 Fragment of Symbiodinolide

We have synthesized eight possible diastereoisomers 3 a – h of the C79–C97 fragment of symbiodinolide ( 1 ) in a stereodivergent manner by utilizing a dithiane addition to the aldehyde as a key step. Comparison of the ¹³C NMR chemical shifts of the natural product 1 and the synthetic products 3 a – h indicated that the relative stereostructure of this fragment in symbiodinolide ( 1 ) is that represented in 3 a or f . We have stereodivergently synthesized eight possible diastereoisomers of the C94–C104 fragment 4 a – h , and we have compared their ¹³C NMR chemical shifts with those of the natural product, which established the relative stereochemistry of this fragment to be that described in diastereoisomers 4 a or e . By combining the stereostructural outcomes of the C79–C97 and C94–C104 fragments, we have proposed four candidate compounds of the C79–C104 fragment 2 a – d . We also synthesized diastereoisomers 2 a and b ( 2 a in the preceding article; Chem. Eur. J. 2015 , DOI: 10.1002/chem.201503880) by a Julia–Kocienski olefination and diastereoisomers 2 c and d by a Wittig reaction. By comparing the ¹³C NMR chemical shifts of natural symbiodinolide ( 1 ) with those of the synthetic products 2 a – d , we have reassigned the stereostructure of the C79–C104 fragment of natural product 1 to be that depicted in diastereoisomer 2 b .     

Retrospect of Se and Te Chemistry

Retrospect of organoselenium and tellurium chemistry for these 30 years is described focusing on our novel findings in this field: (1) telluroxide elimination leading to alkenes and allylic compounds, (2) Pd-catalyzed or –mediated carbodetelluration for a new C–C bond formation, (3) synthesis of chiral diferrocenyl dichalcogenides and their use as chiral auxiliaries, (4) asymmetric selenoxide elimination for making optically active allenes and alkenes, (5) meta chloroperbenzoic acid (MCPBA) oxidation of organic selenides and tellurides leading to a substitution of a PhSe or PhTe moiety, as well as (6) preparation of chalcogen-bridged diruthenium complexes and their catalytic use for propargylic substitution reactions.     

Rational Design for Cooperative Recognition of Specific Nucleobases Using β‐Cyclodextrin‐Modified DNAs and Fluorescent Ligands on DNA and RNA Scaffolds

We propose a binary fluorimetric method for DNA and RNA analysis by the combined use of two probes rationally designed to work cooperatively. One probe is an oligonucleotide (ODN) conjugate bearing a β‐cyclodextrin (β‐CyD). The other probe is a small reporter ligand, which comprises linked molecules of a nucleobase‐specific heterocycle and an environment‐sensitive fluorophore. The heterocycle of the reporter ligand recognizes a single nucleobase displayed in a gap on the target labeled with the conjugate and, at the same time, the fluorophore moiety forms a luminous inclusion complex with nearby β‐CyD. Three reporter ligands, MNDS (naphthyridine–dansyl linked ligand), MNDB (naphthyridine–DBD), and DPDB (pyridine–DBD), were used for DNA and RNA probing with 3′‐end or 5′‐end modified β‐CyD – ODN conjugates. For the DNA target, the β‐CyD tethered to the 3′‐end of the ODN facing into the gap interacted with the fluorophore sticking out into the major groove of the gap site ( MNDS and DPDB ). Meanwhile the β‐CyD on the 5′‐end of the ODN interacted with the fluorophore in the minor groove ( MNDB and DPDB ). The results obtained by this study could be a guideline for the design of binary DNA/RNA probe systems based on controlling the proximity of functional molecules.     

Enantioselective Total Synthesis of Pinnaic Acid and Halichlorine

The enantioselective total synthesis of the bioactive marine natural products pinnaic acid and halichlorine is reported in detail. Our total synthesis features the construction of the five‐membered ring and C9 and C13 stereogenic centers through a palladium‐catalyzed trimethylenemethane [3+2] cyclization; the installation of the nitrogen atom through a regioselective Beckmann rearrangement of a poorly reactive ketone; the stereoselective cyclization of the spiro ring through a four‐step, one‐pot hydrogenation–cyclization; and efficient connection of the sterically hindered lower chain through a reduced‐pressure cross olefin metathesis reaction.     

Supramolecular Approaches towards Ordered Polymer Materials

Controlled organization of polymer chains into ordered structures is highly important to tune or enhance the properties of the polymeric materials. A supramolecular approach using host–guest chemistry has allowed rational design of chain assemblies with many functional properties. Nanoporous materials with ordered channel structures are particularly useful for attaining precise assemblies of polymer chains through nanoconfinement.     

Total Synthesis of the Antibiotic Kendomycin: A Macrocyclization Using the Tsuji–Trost Etherification

A highly stereocontrolled, convergent total synthesis of kendomycin [(?)‐TAN2162], an ansa‐macrocyclic antibiotic, is reported. The key of the strategy is an unprecedented Tsuji–Trost macrocyclic etherification, followed by a transannular Claisen rearrangement to construct the 18‐membered carbocyclic framework. The oxa‐six‐ and five‐membered rings were also stereoselectively constructed respectively by a cascade oxidative cyclization at an unfunctionalized benzylic position and using a one‐pot epoxidation/5‐exo‐tet epoxide opening.     

New cyclic tellurides. Synthesis, reaction and ligand properties of 2,2,6,6-tetramethyl-1-oxa-4-tellura-2,6-disilacyclohexane (C6H16OSi2Te). X-Ray structure determination of C6H16OSi2TeI2

A new tellurium-containing heterocyclic compound, 2,2,6,6-tetramethyl-1-oxa-4-tellura-2,6-disilacyclohexane (C₆H₁₆OSi₂Te) (1), has been prepared by treatment of 1,3-bis(chloromethyl)-1,1,3,3-tetramethyldisiloxane with sodium telluride. Mononuclear and dinuclear palladium complexes of this telluride have been prepared by the reaction of 1 with PdCl₂(PhCN)₂ and Na₂PdCl₄, respectively. The following new derivatives of 1 have also been produced: C₆H₁₆OSi₂TeI₂ (2), C₆H₁₆OSi₂TeBr₂, C₆H₁₆OSi₂TeCl₂, C₆H₁₆OSi₂Te(CH₃)I, and C₆H₁₆OSi₂Te(CH₂Ph)Br. IR, ¹H and ¹³C NMR and mass spectral data of these new compounds are reported and discussed. ¹H NMR studies revealed that in CDCl₃ solution both telluronium salts reductively eliminate alkyl halide. The crystal structure of compound 2 has been determined by X-ray diffraction. The compound crystallizes in the monoclinic space group, P2₁/c, with four molecules in a unit cell of dimension a 12.960(3), b 8.846(2), c 13.754(4) Å, β 92.44(2)°, R = 0.049, and R_w = 0.067 for 3599 unique reflections with |F₀| > 3σ(F₀). The compound forms a six-membered ring of a slightly displaced boat type. The geometry about the Te atom is pseudo-octahedral, with two carbon atoms (Te-C = 2.156(7) and 2.137(6) Å) and two iodine atoms of the neighbouring molecules (weak intermolecular bonds, Te · I = 3.769 and 3.806 Å) in the equatorial positions and two iodine atoms (Te-I = 2.909(1) and 2.913(1) Å) in the axial positions.