Signature of relations in mapping class groups and non-holomorphic Lefschetz fibrations

We introduce the notion of signature for relations in mapping class groups and show that the signature of a Lefschetz fibration over the 2-sphere is the sum of the signatures for basic relations contained in its monodromy. Combining explicit calculations of the signature cocycle with a technique of substituting positive relations, we give some new examples of non-holomorphic Lefschetz fibrations of genus and which violate slope bounds for non-hyperelliptic fibrations on algebraic surfaces of general type.

     

Structures of 17,19-hexatriacontadiyne monolayers on Au(111) studied by infrared reflection absorption spectroscopy and scanning tunneling microscopy

The aggregation and reaction of 17,19-hexatriacontadiyne molecules are studied on a Au(111) surface. The molecular orientation and arrangement are elucidated by infrared reflection absorption spectroscopy (IRAS) and scanning tunneling microscopy (STM). A vapor-deposited monolayer and a multilayered film formed by adsorption from the solution provide IRA spectra with bands due to the antisymmetric and symmetric stretching of methylenes in the gauche conformation. After the adsorbed film is rinsed with the solvent, however, the spectrum loses the gauche bands and is characterized by the enhanced C-H(distal) and C-H(proximal) stretching bands, which means that all-trans molecules are laid flat. Only STM images for the rinsed film display columnar structures on the herringbones of the reconstructed Au(111) surface; the alkyl chain direction is found to be parallel to the Au atom row. The results indicate that an ordered monolayer is formed first at the liquid-solid interface, and then, disordered overlayers with the gauche conformation are grown but removed by a rinse. Upon exposure to UV light, thus obtained monomer columns are converted into oligomers with flexible backbones and an increased gauche population in the alkyl chains, which resemble red phase polydiacetylenes in LB films.     

Enhanced CO2 adsorptivity of SWCNT by polycyclic aromatic hydrocarbon intercalation

We tuned the electronic properties of single wall carbon nanotube (SWCNT) with intercalation of naphthalene derivatives (NDs) having different electron donor or acceptor property in the SWCNT bundles. Characterization of the adsorbed SWCNT with Raman spectroscopy and electrical conductivity measurement clearly indicate the charge transfer interaction of ND molecules with SWCNT. Also X-ray diffraction supports the intercalation of ND molecules in the interstitial spaces and groove sites of SWCNT bundle. Intercalation of ND molecules enhances remarkably the CO₂ adsorptivity, which can be ascribed to the key importance of the interaction of the quadrupole moment of CO₂ with the local electrical field on the SWCNT induced by the charge transfer interaction.     

Preparation of nanoscale cellulose materials with different morphologies by mechanical treatments and their characterization

Rod-like cellulose nanowhiskers and spherical cellulose nanoparticles were prepared from wood-pulp-derived cellulose powder by mechanical refining processes such as high-pressure homogenization (HPH) and ball-milling (BM). The nanowhiskers obtained by the HPH method were found to be 200–500 nm long and 11–16 nm wide. The diameters of the nanoparticles were in the range 40–200 nm, depending on the BM time, and were reduced to 25–50 nm after extra HPH. By adjusting the BM time, cellulose nanoparticles having different polymorphs with similar morphologies were prepared. The X-ray diffraction patterns revealed the recrystallization of cellulose I (1 h of BM time) or cellulose II (4–8 h of BM time) in ball-milled nanoparticles after water washing and solvent exchange treatments. The nanowhisker widths derived from the specific surface areas (SSA) by adsorption methods such as Congo red dye, nitrogen, and water vapor, sorptions were in agreement with those obtained from transmission electron microscopy and atomic force microscopy images. Similar SSA values were obtained for micro- and nano-scale cellulose materials using water vapor adsorption methods, and the SSAs of nanoparticles obtained by different adsorption methods are also discussed.     

Design of functional polymers based on organic synthesis - novel polymerizations of allene and propargyl derivatives

This paper describes our recent work dealing with novel polymerization methods of allene and propargyl derivatives. By the radical, cationic, and living coordination polymerizations, polymers bearing exomethylene moieties in the side chain could be obtained. The polymers obtained could undergo the cationic crosslinking reaction. As step-growth polymerizations, spontaneous copolymerizations, polyadditions with dithiols, and coupling polymerizations using palladium catalyst are also described.     

Structural Insights into Rice Straw Pretreated by Hot-Compressed Water in Relation to Enzymatic Hydrolysis

Pretreatment-induced structural alteration is critical in influencing the rate and extent of enzymatic saccharification of lignocellulosic biomass. The present work has investigated structural features of rice straw pretreated by hot-compressed water (HCW) from 140 to 240 °C for 10 or 30 min and enzymatic hydrolysis profiles of pretreated rice straw. Compositional profiles of pretreated rice straw were examined to offer the basis for structural changes. The wide-angle X-ray diffraction analysis revealed possible modification in crystalline microstructure of cellulose and the severity-dependent variation of crystallinity. The specific surface area (SSA) of pretreated samples was able to achieve more than 10-fold of that of the raw material and was in linear relationship with the removal of acetyl groups and xylan. The glucose yield by enzymatic hydrolysis of pretreated materials correlated linearly with the SSA increase and the dissolution of acetyl and xylan. A quantitatively intrinsic relationship was suggested to exist between enzymatic hydrolysis and the extraction of hemicellulose components in hydrothermally treated rice straw, and SSA was considered one important structural parameter signaling the efficiency of enzymatic digestibility in HCW-treated materials in which hemicellulose removal and lignin redistribution happened.     

Unique Reactivity of a Diphenyldisilane Unit Incorporated into the Bicyclic Ring System: Generation of a Disilanyllithium via Silicon-Phenyl Bond Cleavage with Lithium

A bicyclic diphenyldisilane bearing two tetramethylene tethers reacts with lithium to form predominantly the disilanyllithium as a result of Si-C_Ph bond fission, while the pentamethylene homolog undergoes ordinary Si-Si bond cleavage to afford the expected phenylsilyllithium. The compressed Si-Si bond incorporated in the bicyclic ring system may be kinetically stabilized (compression effect), resulting in the unusual Si-C bond fission. When the reaction is carried out in the presence of chlorotrimethylsilane, a Calas-type reaction takes place on the phenyl rings. This result suggests that electron transfer to the phenyl group is the primary process in these bicyclic disilanes, followed by Si-Si or Si-C bond cleavage to afford the corresponding silyllithium species.     

Integration of gene amplification and capillary gel electrophoresis on a polydimethylsiloxane-glass hybrid microchip

We report on the development of a hybrid polydimethylsiloxane (PDMS)-glass microchip for genetic analysis by functional integration of polymerase chain reaction (PCR) and capillary gel electrophoresis (CGE), and on related temperature control systems for PCR on a PDMS-glass hybrid microchip. The microchip was produced by molding PDMS against a microfabricated master with comparatively simple and inexpensive methods. PCR was successfully carried out on the PDMS-glass hybrid microchip with 500 bp target of lambdaDNA and the amplified gene was subsequently analyzed by CGE on the same PDMS-glass microchip. The chip could be considered as an inexpensive single-use apparatus compared to glass or silicon-made microchips for the same purpose.     

Amphidinolides T2, T3, and T4, new 19-membered macrolides from the dinoflagellate Amphidinium sp. and the biosynthesis of amphidinolide T1.

Three new 19-membered macrolides, amphidinolides T2 (2), T3 (3), and T4 (4), structurally related to amphidinolide T1 (1) have been isolated from two strains of marine dinoflagellates of the genus Amphidinium. The structures of 2-4 were elucidated on the basis of spectroscopic data. The absolute configurations at C-7, C-8, and C-10 of 1-4 were determined by comparison of NMR data of their C-1-C-12 segments with those of synthetic model compounds for the tetrahydrofuran portion. The biosynthetic origins of amphidinolide T1 (1) were investigated on the basis of 13C NMR data of a 13C enriched sample obtained by feeding experiments with [1-(13)C], [2-(13)C], and [1,2-(13)C2] sodium acetates and 13C-labeled sodium bicarbonate in the cultures of the dinoflagellate. These incorporation patterns suggested that amphidinolide T1 (1) was generated from four successive polyketide chains, an isolated C1 unit formed from C-2 of acetates, and three unusual C2 units derived only from C-2 of acetates. Furthermore, it is noted that five oxygenated carbons of C-1, C-7, C-12, C-13, and C-18 were not derived from the C-1 carbonyl, but from the C-2 methyl of acetates.