Evaluating adsorption ability of granite to radioselenium by chemical sequential extraction

A good understanding of the migration of selenite, Se(IV), through deep granitic layers depends on a good understanding of the geochemistry of these layers. Chemical sequential extraction is applied herein to evaluate the ability of granite to adsorb Se(IV) in DW, GW and SW systems. The experimental results indicate that the removal of crystalline Fe oxides reduces the adsorption of Se(IV), suggesting its importance in granite. The normalized concentrations of Se(IV) adsorbed onto crystalline Fe oxides is approximately 0.0301, 0.0330 and 0.0335 mole Se(IV) adsorbed/mole of Fe in DW, GW and SW systems. Kinetic adsorption experiments are conducted to elucidate the results of the chemical sequential extraction. Both the treated and the untreated granite take the same time to reach their equilibrium, suggesting that crystalline Fe oxides dominate the adsorption of Se(IV). Meanwhile, the one-site model suffices to simulate the kinetics of adsorption.     

A novel calcium-dependent bacterial phosphatidylinositol-specific phospholipase C displaying unprecedented magnitudes of thio effect,inverse thio effect,and stereoselectivity

Understanding the potential range of enzymatic thio effects (kO/kS) is of great value when using sulfur-substituted phosphate analogues to study phosphoryl transfer reactions in enzymes and ribozymes. Herein we report that a newly discovered Ca2+-dependent Streptomyces antibioticus phosphatidylinositol-specific phospholipase C and its mutants display unprecedented magnitudes of thio effect, inverse thio effect, and RP/SP stereoselectivity. We demonstrate that for a single enzyme the bridging thio effect can vary from 0.002 to 20 and the nonbridging thio effect can vary from 1 to 108. These values fall outside the range of those reported for nonenzymatic reactions, emphasizing the need for cautious interpretation when using thio effects to elucidate details of enzyme catalysis.     

A fine balancing act of type III polyketide synthase

In this issue of Chemistry & Biology, a novel Aldol-Switch mechanism is proposed for the biosynthesis of type III polyketides, which include many antioxidants found in colorful fruits. Based on structural and mutagenesis studies, the Aldol-Switch mechanism suggests that electronic effects balance between two competing cyclization specificities in Type III polyketide synthases. A novel hypothesis is also used to explain stilbenecarboxylate biosynthesis.     

Synthesis of Certain Benzoheterocyclic Compounds from 2‐Hydroxyacetophenone via Cyclization and Ring‐closing Metathesis

Synthesis of some benzoheterocyclic compounds like substituted benzofurans, 4‐methyl‐2H‐chromenes and 3,4‐dihydro‐2H‐benzo[b]oxepin‐5‐ones from 2‐hydroxyacetophenone via base induced cyclization and ring‐closing metathesis (RCM) is described.     

Sol-gel derived urease-based optical biosensor for the rapid determination of heavy metals

A urease optical biosensor for the determination of heavy metals based on sol-gel immobilization technique was developed. A fluorescent dye, FITC-dextran, was encapsulated and parameters including optical properties of the probe, relative enzyme activity, initial pH value and the buffer concentration for substrate preparation were investigated. In sol-gel immobilization, 1 mM Tris-HCl at pH 7.1 provided a sufficient buffer capacity for metal ion analysis as well as the enzyme activity maintenance. Also, two analytical procedures, incubated and un-incubated systems, were compared to understand the sensitivity and applicability to heavy metal analysis. The developed optical biosensor showed high reproducibility and the relative standard deviation (R.S.D.) of 5.1% (n=10) was obtained. Also, eight measurements can be completed automatically within 36 min. The biosensor has high sensitivity to Cu(II) and Cd(II) and an analytical range of 10-230 μM with a detection limit of 10 μM was achieved. Moreover, biological and environmental samples were examined to evaluate the applicability of the developed biosensor. A 19-82% of inhibition was observed when 20-45 μM metal ions were amended into tested samples, revealing that the developed system has the potential for the determination of heavy metals in real samples.     

Electrochemical Detection of 2‐Naphthol at a Glassy Carbon Electrode Modified with Tosflex Film

In this study, a Tosflex (a perfluoro‐anion‐exchange membrane) modified glassy carbon electrode has been used to detect 2‐naphthalenol (2‐naphthol) in aqueous solutions in order to demonstrate the electroanalytical application of Tosflex. 2‐naphthol polymerizes upon electrochemical oxidation at a glassy carbon electrode; however, the current related to this oxidation is too small for analytical purpose at low concentration level. A Tosflex polymer modified glassy carbon electrode (TFGCE) was found of having capability to improve the detection limit because 2‐naphthol molecules deprotonated in basic solutions to form 2‐naphtholate anions that were accumulated to TFGCE by the anion‐exchange characteristic of Tosflex. The accumulated 2‐naphtholate anions were determined with the following differential pulse voltammetry. With 3 minutes accumulation at +0.05 V, the dependence of oxidation current versus concentration was linear from 8×10^?7 M to 1×10^?5 M with a regression coefficient of 0.999 and a detection limit of 2×10^?7 M. Unlike many other anion‐exchange polymer modified electrodes, the TFGCE is stable at highly basic condition.     

Efficient synthesis of serically constrained smmetrically alpha,alpha-disubstituted alpha-amino acids under operationally convenient conditions

Homologation of the nucleophilic glycine equivalent Ni-Gly-PABP [Ni(II) complex of glycine Schiff base with 2-[N-(alpha-picolyl)amino]benzophenone (PABP)] 2 via alkyl halide alkylations and Michael addition reactions was systematically studied as a general method for preparing symmetrically alpha,alpha-disubstituted alpha-amino acids (sym-alpha,alpha-AA). The dialkylation reactions are conducted under operationally convenient conditions without recourse to inert atmosphere, dried solvents, and low temperatures, thus enjoying key advantages of the experimental simplicity and attractive cost structure. The method has been shown to be particularly successful for the dialkylation of complex 2 with activated and nonactivated alkyl halides, including propargyl derivatives, affording a generalized and practical access to the corresponding sym-alpha,alpha-AA. This study has also shown some limitation of the method, as it cannot be extended to alpha- or beta-branched alkyl halides or Michael acceptors to be used for the dialkylation of glycine equivalent 2. High chemical yields of the dialkylated products, combined with the simplicity of the experimental procedure, render this method worth immediate use for multigram scale preparation of the sym-alpha,alpha-AA.     

Determination of Thorium and Total Rare Earths in Monazite Sand with Fluoride Electrode

A new method has been proposed to determine the total rare earths and thorium in monazite sand with fluoride electrode. The total amount of thorium and rare earths could be determined by back-titration with standard lanthanum solution in excess fluoride, and the rare earths were titrated directly with fluoride from separate sample. Fluoride electrode was used as indicator electrode. Precision and accuracy were improved by Gran's plot technique.     

Ultraviolet difference spectroscopic study on the interactions of cellulase fromTrichoderma reesei with cellodextrins

The formation of cellodextrin-cellobiohydrolase complex was studied by ultraviolet difference spectroscopy. Upon the binding of cellodextrins (G₇‐G₃), cellobiohydrolase (EC 3.2.1.91) purified fromTrichoderma reesei produced difference spectra having maxima at 289‐293 nm and 283‐286 nm. These spectra are consistent with prior observations reported for lysozyme and amylase. In this case, water soluble cellulose oligomers (i.e., cellodextrins) are shown to interact with tryptophan residue(s) on cellobiohydrolase. The difference spectral maxima observed at acidic or alkaline pH were shifted. This was accompanied by a marked decrease of binding ability of cellobiohydrolase for cellodextrins. The standard free energy change for the association of cellodextrins to the cellobiohydrolase was an order of 4 kcal/gmol. The association constant of enzyme for substrate decreases by 15‐20% as temperature increases from 20 to 48°C. At 25°C, the dissociation constants for the enzyme with respect to cellohexose and cellotriose were estimated to be 1.19 and 1.37 mM, respectively. A decrease in dissociation constants was observed with an increase in the number of glucosyl units from 3 to 6. This suggests that there may be six or more subsites in the active center of cellobiohydrolase.     

Natural Product Chemistry: From Plants to Human

Conventionally, natural product chemistry deals with the isolation, characterization, and synthesis of compounds from plants. It a broad sense, natural product chemistry may include all fields of biochemistry. Two projects are presented to illustrate the expanded definition of natural product chemistry. One deals with phosphatidylinositol (PI) and the key enzyme involved in its metabolism, PI-specific phospholipase C. The other project is on the structure-function relationship of human tumor suppressor p16.