Hierarchical dynamics in allostery following ATP hydrolysis monitored by single molecule FRET measurements and MD simulations

We report on a study that combines advanced fluorescence methods with molecular dynamics (MD) simulations to cover timescales from nanoseconds to milliseconds for a large protein. This allows us to delineate how ATP hydrolysis in a protein causes allosteric changes at a distant protein binding site, using the chaperone Hsp90 as test system. The allosteric process occurs via hierarchical dynamics involving timescales from nano- to milliseconds and length scales from Ångstroms to several nanometers. We find that hydrolysis of one ATP is coupled to a conformational change of Arg380, which in turn passes structural information via the large M-domain α-helix to the whole protein. The resulting structural asymmetry in Hsp90 leads to the collapse of a central folding substrate binding site, causing the formation of a novel collapsed state (closed state B) that we characterise structurally. We presume that similar hierarchical mechanisms are fundamental for information transfer induced by ATP hydrolysis through many other proteins.

We report on a study that combines advanced fluorescence methods with molecular dynamics simulations to cover timescales from nanoseconds to milliseconds for a large protein, the chaperone Hsp90.     

Jumps of Minimal Degrees Below 0'

We show that there is a degree a REA in and low over 0' suchthat no minimal degree below 0' jumps to a degree above a. Wealso show that every nonlow recursively enumerable degree boundsa nonlow minimal degree.     

Application of the photoionization detector for the determination of ethanol in aqueous solutions and human breath

A determination of ethanol is described, which is based on a purging system in conjunction with a photoionization detector. With that system a fast and reliable determination of ethanol in aqueous solutions is possible. The system has been used for the analysis of wine. The 3-detection limit has been 0.005% ethanol, the relative standard deviation 4.8 to 6.0% and the time constant of the entire analytical system 20 s. The photoionization detector has been also applied to the analysis of artificial and genuine human breath. A comparison with gas-chromatography and non-dispersive IR-detection has been proven the reliability of results.     

Genes encoding enzymes responsible for biosynthesis of L-lyxose and attachment of eurekanate during avilamycin biosynthesis

The oligosaccharide antibiotic avilamycin A is composed of a polyketide-derived dichloroisoeverninic acid moiety attached to a heptasaccharide chain consisting of six hexoses and one unusual pentose moiety. We describe the generation of mutant strains of the avilamycin producer defective in different sugar biosynthetic genes. Inactivation of two genes (aviD and aviE2) resulted in the breakdown of the avilamycin biosynthesis. In contrast, avilamycin production was not influenced in an aviP mutant. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Finally, AviE2 was expressed in Escherichia coli and the gene product was characterized biochemically. AviE2 was shown to convert UDP-D-glucuronic acid to UDP-D-xylose, indicating that the pentose residue of avilamycin A is derived from D-glucose and not from D-ribose. Here we report a UDP-D-glucuronic acid decarboxylase in actinomycetes.     

Über Oxotantalate der Lanthanide des Formeltyps MTaO4 (M = La – Nd,Sm – Lu)

About Lanthanide Oxotantalates with the Formula MTaO₄ (M = La – Nd, Sm – Lu) Besides being a by‐product of solid state syntheses in tantalum ampoules the lanthanide(III) oxotantalates of the formula MTaO₄ can be easily prepared by sintering lanthanide sesquioxide M₂O₃ and tantalum(V) oxide Ta₂O₅ with sodium chloride as flux. Under these conditions two structure types emerge depending upon the M³⁺ cationic radius. For M = La – Pr the MTaO₄‐type tantalates crystallize in the space group P2₁/c with lattice constants of a = 762(±1), b = 553(±4), c = 777(±4) pm, β = 101(±1)° and four formula units per unit cell. With M = Nd, Sm – Lu, the monoclinic cell dimensions (space group P2/c) shrink to the lattice constants like a = 516(±9), b = 551(±9), c = 534(±9) pm, β = 96.5(±0.3)° and there are only two formula units present. Both structures show a coordination sphere of eight oxygen atoms for the lanthanide trications shaped as distorted square antiprism for the structure with the larger lanthanides (in the following referred to as A‐type) and as trigonal dodecahedron for the structure with the smaller ones (called as B‐type in the following). The coordination environment about the Ta⁵⁺ cations can be described as a slightly distorted octahedron (CN = 6) for the A‐type structure of MTaO₄ and a heavily distorted one (CN = 6) for the B‐type. The difference between the two types results from the interconnection of these [TaO₆]^7? octahedra. Whereas they are connected via four vertices to form corrugated layers according to parallel the bc‐plane in the A‐type, the octahedra of the B‐type MTaO₄ structure share edges to built up zig‐zag chains along the c axis.     

Determination of phenoxy acid herbicides by high-performance liquid chromatography and on-line enrichment

Summary Phenoxy acid herbicides have been determined by use of high-pressure liquid chromatography (HPLC). The separation efficiency of several stationary phases like octadecyl silica and nitril silica has been estimated using different mobile phases. Regarding the necessary experimental conditions for separating phenoxy acids, the enrichment phases for on-line operation have been tested by use of column switching. The method of sample enrichment is described and the enrichment factors have been calculated.

---

Bestimmung von Phenoxycarbonsäure-Herbiciden durch HPLC und On-line-AnreicherungI. Möglichkeiten der chromatographischen Trennung durch HPLC unter besonderer Berücksichtigung der On-line-Anreicherung der Herbicid-Verbindungen