Prediction of pH-dependent aqueous solubility of druglike molecules

In the present work, the Henderson-Hasselbalch (HH) equation has been employed for the development of a tool for the prediction of pH-dependent aqueous solubility of drugs and drug candidates. A new prediction method for the intrinsic solubility was developed, based on artificial neural networks that have been trained on a druglike PHYSPROP subset of 4548 compounds. For the prediction of acid/base dissociation coefficients, the commercial tool Marvin has been used, following validation on a data set of 467 molecules from the PHYSPROP database. The best performing network for intrinsic solubility predictions has a cross-validated root mean square error (RMSE) of 0.70 log S-units, while the Marvin pKa plug-in has an RMSE of 0.71 pH-units. A data set of 27 drugs with experimentally determined pH-solubility curves was assembled from the literature for the validation of the combined pH-dependent model, giving a mean RMSE of 0.79 log S-units. Finally, the combined model has been applied on profiling the solubility space at low pH of five large vendor libraries.     

Inverse hydrogen migration in arginine-containing peptide ions upon electron transfer

Collisional electron transfer from gaseous Cs atoms was studied for singly and doubly protonated peptides Gly-Arg (GR) and Ala-Arg (AR) at 50- and 100-keV kinetic energies. Singly protonated GR and AR were discharged to radicals that in part rearranged by migration of a C_α hydrogen atom onto the guanidine group. The C_α-radical isomers formed were detected as stable anions following transfer of a second electron. In addition to the stabilizing rearrangements, the radicals underwent side-chain and backbone dissociations. The latter formed z fragments that were detected as the corresponding anions. Analysis of the (GR+H)^· radical potential energy surface using electronic structure theory in combination with Rice-Ramsperger-Kassel-Marcus calculations of rate constants indicated that the arginine C_α hydrogen atom was likely to be transferred to the arginine side-chain on the experimental timescale of ≤200 ns. Transfer of the Gly C_α-H was calculated to have a higher transition-state energy and was not kinetically competitive. Collisional electron transfer to doubly protonated GR and AR resulted in complete dissociation of (GR+2H)^+· and (AR+2H)^+· ions by loss of H, ammonia, and N-C_α bond cleavage. Electronic structure theory analysis of (GR+2H)^+· indicated the presence of multiple conformers and electronic states that differed in reactivity and steered the dissociations to distinct channels. Electron attachment to (GR+2H)²⁺ resulted in the formation of closely spaced electronic states of (GR+2H)^+· in which the electron density was delocalized over the guanidinium, ammonium, amide, and carboxyl groups. The different behavior of (GR+H)^· and (GR+2H)^+· is explained by the different timescales for dissociation and different internal energies acquired upon electron transfer.     

Determination of van der Waals forces in monolayer films of lipids & biopolymers. Equation of state for two-dimensional films

Amphiphile molecules are characterized by the dual property arising from the interactions between the apolar [alkyl] and the polar part and the surrounding solvent, i.e., water. In assemblies which amphiphiles form in diverse systems, e.g., micelles, soap bubbles, monolayers or bilayers at interfaces, the attractive forces are attributed to the van der Waals forces. It is not easy to estimate the magnitude of van der Waals forces in some of these systems by any direct method.The magnitude of van der Waals forces in spread monolayers of lipids and biopolymers has been reported to be estimated from experimental data. The magnitude of these forces has been estimated by using an equation of state of a very general form, as delineated herein. In the current literature no such attempt has been reported in the analyses of these monolayers spread on aqueous surfaces. These analyses suggest that the predominant surface forces arise from van der Waals interactions, if the magnitude of electrostatic charge repulsions is weak. The equation-of-state as derived indicates that it is useful in providing information about the molecular interaction in monolayers, for both lipids and biopolymers.     

On the Photoabsorption by Permanganate Ions in Vacuo and the Role of a Single Water Molecule. New Experimental Benchmarks for Electronic Structure Theory

We report electronic spectra of mass‐selected MnO₄^? and MnO₄^??H₂O using electronic photodissociation spectroscopy. Bare MnO₄^? fragments by formation of MnO₃^? and MnO₂^?, while the hydrated complex predominantly decays by loss of the water molecule. The band in the visible spectral region shows a well‐resolved vibrational progression consistent with the excitation of a Mn? O stretching mode. The presence of a single water molecule does not significantly perturb the spectrum of MnO₄^?. Comparison with the UV/Vis absorption spectrum of permanganate in aqueous solution shows that complete hydration causes a small blueshift, while theoretical models including a dielectric medium have predicted a redshift. The experimental data can be used as benchmarks for electronic structure theory methods, which usually predict electronic spectra in the absence of a chemical environment.     

Reversible Guest Binding in a Non‐Porous FeII Coordination Polymer Host Toggles Spin Crossover

Formation of either a dimetallic compound or a 1 D coordination polymer of adiponitrile adducts of [Fe(bpte)]²⁺ (bpte=[1,2‐bis(pyridin‐2‐ylmethyl)thio]ethane) can be controlled by the choice of counteranion. The iron(II) atoms of the bis(adiponitrile)‐bridged dimeric complex [Fe₂(bpte)₂(μ₂‐(NC(CH₂)₄CN)₂](SbF₆)₄ ( 2 ) are low spin at room temperature, as are those in the polymeric adiponitrile‐linked acetone solvate polymer {[Fe(bpte)(μ₂‐NC(CH₂)₄CN)](BPh₄)₂ ? Me₂CO} ( 3? Me₂CO). On heating 3? Me₂CO to 80 °C, the acetone is abruptly removed with an accompanying purple to dull lavender colour change corresponding to a conversion to a high‐spin compound. Cooling reveals that the desolvate 3 shows hysteretic and abrupt spin crossover (SCO) S=0?S=2 behaviour centred at 205 K. Non‐porous 3 can reversibly absorb one equivalent of acetone per iron centre to regenerate the same crystalline phase of 3? Me₂CO concurrently reinstating a low‐spin state.     

The α-Effect and Competing Mechanisms: The Gas-Phase Reactions of Microsolvated Anions with Methyl Formate

The enhanced reactivity of α-nucleophiles, which contain an electron lone pair adjacent to the reactive site, has been demonstrated in solution and in the gas phase and, recently, for the gas-phase S_N2 reactions of the microsolvated HOO^–(H₂O) ion with methyl chloride. In the present work, we continue to explore the significance of microsolvation on the α-effect as we compare the gas-phase reactivity of the microsolvated α-nucleophile HOO^–(H₂O) with that of microsolvated normal alkoxy nucleophiles, RO^–(H₂O), in reactions with methyl formate, where three competing reactions are possible. The results reveal enhanced reactivity of HOO^–(H₂O) towards methyl formate, and clearly demonstrate the presence of an overall α-effect for the reactions of the microsolvated α-nucleophile. The association of the nucleophiles with a single water molecule significantly lowers the degree of proton abstraction and increases the S_N2 and B_AC2 reactivity compared with the unsolvated analogs. HOO^–(H₂O) reacts with methyl formate exclusively via the B_AC2 channel. While microsolvation lowers the overall reaction efficiency, it enhances the B_AC2 reaction efficiency for all anions compared with the unsolvated analogs. This may be explained by participation of the solvent water molecule in the B_AC2 reaction in a way that continuously stabilizes the negative charge throughout the reaction.

Optically active aromatic and heteroaromatic alpha-amino acids by a one-pot catalytic enantioselective addition of aromatic and heteroaromatic C-H bonds to alpha-imino esters

The development of a practical one-pot catalytic enantioselective procedure for the synthesis of non-natural aromatic and heteroaromatic alpha-amino acids is reported. Starting from readily available starting materials and application of a chiral BINAP-Cu(I) catalyst, the optically active products are formed with readily removable N-protecting groups. The scope of the reaction is demonstrated by the addition of substituted furans, thiophenes, pyrroles, and aromatic compounds to N-alkoxycarbonyl-alpha-imino esters in good yields and with enantioselectivities up to 96% ee for the furans, 93% ee for the thiophenes, and 98% for the aromatic compounds. The protecting groups are readily removed, and various transformations of the aromatic and heteroaromatic alpha-amino acids are demonstrated. The coordination of the N-alkoxycarbonyl alpha-imino ester to the chiral BINAP-Cu(I) complex and the enantioselectivity of the catalyst is discussed on the basis of the DFT calculations and X-ray crystallographic data.     

The Current State of Silicone‐Based Dielectric Elastomer Transducers

Silicone elastomers are promising materials for dielectric elastomer transducers (DETs) due to their superior properties such as high efficiency, reliability and fast response times. DETs consist of thin elastomer films sandwiched between compliant electrodes, and they constitute an interesting class of transducer due to their inherent lightweight and potentially large strains. For the field to progress towards industrial implementation, a leap in material development is required, specifically targeting longer lifetime and higher energy densities to provide more efficient transduction at lower driving voltages. In this review, the current state of silicone elastomers for DETs is summarised and critically discussed, including commercial elastomers, composites, polymer blends, grafted elastomers and complex network structures. For future developments in the field it is essential that all aspects of the elastomer are taken into account, namely dielectric losses, lifetime and the very often ignored polymer network integrity and stability.