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21.
Kondoh M Hitomi K Yamamoto J Todo T Iwai S Getzoff ED Terazima M 《Journal of the American Chemical Society》2011,133(7):2183-2191
Proteins of the cryptochrome/photolyase family share high sequence similarities, common folds, and the flavin adenine dinucleotide (FAD) cofactor, but exhibit diverse physiological functions. Mammalian cryptochromes are essential regulatory components of the 24 h circadian clock, whereas (6-4) photolyases recognize and repair UV-induced DNA damage by using light energy absorbed by FAD. Despite increasing knowledge about physiological functions from genetic analyses, the molecular mechanisms and conformational dynamics involved in clock signaling and DNA repair remain poorly understood. The (6-4) photolyase, which has strikingly high similarity to human clock cryptochromes, is a prototypic biological system to study conformational dynamics of cryptochrome/photolyase family proteins. The entire light-dependent DNA repair process for (6-4) photolyase can be reproduced in a simple in vitro system. To decipher pivotal reactions of the common FAD cofactor, we accomplished time-resolved measurements of radical formation, diffusion, and protein conformational changes during light-dependent repair by full-length (6-4) photolyase on DNA carrying a single UV-induced damage. The (6-4) photolyase by itself showed significant volume changes after blue-light activation, indicating protein conformational changes distant from the flavin cofactor. A drastic diffusion change was observed only in the presence of both (6-4) photolyase and damaged DNA, and not for (6-4) photolyase alone or with undamaged DNA. Thus, we propose that this diffusion change reflects the rapid (50 μs time constant) dissociation of the protein from the repaired DNA product. Conformational changes with such fast turnover would likely enable DNA repair photolyases to access the entire genome in cells. 相似文献
22.
The transformation of aldehydes, ketones and esters to the next higher homologous aldehydes was accomplished by utilizing electroreductive 1,2-elimination as a key step. 相似文献
23.
Yuko Uchio Yukio Isozaki Tsutomu Ota Atsushi Utsunomiya Mikhail M. Buslov Shigenori Maruyama 《Proceedings of the Japan Academy. Series B, Physical and biological sciences》2004,80(9):422
The Baratal limestone in the Gorny Altai Mountains, southern Siberia, occurs as large allochthonous blocks within a Cambrian accretionary complex that developed around the Siberia craton. Before the final accretion to Siberia in the Cambrian, the terrigenous clastic-free Baratal limestone was deposited directly upon a basaltic basement with a geochemical signature identical to that of modern oceanic plateau. The Baratal limestone with 598 ± 25 Ma (Early Vendian) Pb-Pb isochron age consists of three distinct facies; 1) massive lime mudstone with ooids and stromatolites, 2) bedded lime mudstone, and 3) limestone conglomerate/breccia dominated by ooid-bearing lime mudstone clasts. The first represents a shallow marine environment on top of an ancient oceanic plateau, while the latter two represent the deeper slope to bottom-of-slope facies of a plateau. The Vendian Baratal limestone provides the oldest example of a reconstructed shallow marine carbonate buildup complex developed on a plateau/seamount in a mid-ocean. 相似文献
24.
YOSHIHISA FUJIWARA JUN HAMADA TAKESHI AOKI TAKASHI SHIMIZU YOSHIFUMI TANIMOTO HIROAKI YONEMURA 《Molecular physics》2013,111(9):1405-1411
High magnetic field dependence of lifetimes of methylene-chain-linked radical ion pairs (RIPs) generated by photo-induced electron transfer from zinc(II) porphyrin to viologen has been confirmed in aqueous acetonitrile using a pulse magnet-laser flash photolysis apparatus. In the case of a short methylene chain it was first revealed that the dependence was definitely different from that for a long one, and was characterized by a reversal in the dependence. In addition to a long lifetime independent of the magnetic field, RIP in fields above 7T exhibited short lifetimes that depended on the field. These results were interpreted not only by spin-lattice (longitudinal) relaxation but also by spin-spin (transverse) relaxation in RIPs. 相似文献
25.
Carbon nanotubes were placed in magnetic fields of 80.0 kOe at temperatures of 231 K and 314 K. Scanning electron microscopy showed that nanotubes were oriented with the tube axis parallel to the fields. It was also observed that the probability of the orientation became higher, when the temperature was raised from 231 K to 314 K. The anisotropy in the susceptibilities parallel X∥ and perpendicular X ⊥ to the tube axis is suggested to increase with rise in temperature: X∥ ? X⊥ = (4 ± 2) × 10?6 emu mol?1 (per mol of carbon atoms) at 231 K and X∥ ? X⊥ = (45 ± 27) × 10?6 emu mol?1 at 314 K. 相似文献
26.
27.
The behavior and mechanism of background signals during depth profiling of atmospheric elements using dual-beam time-of-flight secondary ion mass spectrometry (TOF-SIMS) have been experimentally investigated for silicon wafers. The background signals of atmospheric elements were found to be inversely proportional to the sputtering rate. Most of the background signals are largely attributable to the accumulation of components through adsorption and ion bombardment in the pre-equilibrium state. On the other hand, the contribution of real-time adsorption during the instant after the last sputtering in the equilibrium state is negligible under the present experimental conditions. H2O is dominant in the background formation process of hydrogen and oxygen, which is supported by the higher adsorption coefficients. The background levels of carbon and nitrogen are lower than those of hydrogen and oxygen. Furthermore, the background signal of carbon with respect to the sputtering rate shows a different trend than the other elements. This could be attributed to accumulation in the pre-equilibrium state. These results indicate that the background levels can be lowered close to those of dynamic-SIMS by using an extremely high sputtering rate in dual-beam TOF-SIMS. 相似文献
28.
29.
Dry ball milling of graphite with cellulose and related polysaccharides was found effective for exfoliation-dispersion of graphene-like carbon. The exfoliation behavior was found to depend strongly on the polymer species; namely, polysaccharides are much more effective than thermoplastic polymers. The compression-molded slabs from co-milled powder with cellulose and carboxymethylcellulose showed an electrical percolation threshold of 1.0 % (w/w) or lower. The carbon fraction isolated from milling with carboxymethylcellulose was water-dispersible, containing single- to few-layer graphenes. This method can provide facile and solventless graphene exfoliation and mechanical alloying with polymers. 相似文献
30.
Analysis of Cu segregation to oxide–metal interface of Ni‐based alloy in a metal‐dusting environment
Takashi Doi Kazuyuki Kitamura Yoshitaka Nishiyama Nobuo Otsuka Takeo Kudo Masugu Sato Eiji Ikenaga Shigenori Ueda Keisuke Kobayashi 《Surface and interface analysis : SIA》2008,40(10):1374-1381
Hard X‐ray photoelectron spectroscopy (HX‐PES) has been realized using high‐brilliance synchrotron radiation. High‐energy photon excitation enables us to probe photoelectrons with larger escape depth compared to conventional PES. This allows us to conduct, without destruction, a study of the embedded interface of materials as the oxide‐ metal interface. We apply HX‐PES to investigate for Cu segregation in the oxide–metal interface during metal‐dusting corrosion. The effective concentration of Cu in the segregation was estimated a few times higher than the bulk concentration. These results on the interface layer can explain the variation in the corrosion resistance. Copyright © 2008 John Wiley & Sons, Ltd. 相似文献