Fullerene- and pyromellitdiimide-appended tripodal ligands embedded in light-harvesting porphyrin macrorings

Three new tripyridyl tripodal ligands appended with either fullerene or pyromellitdiimide moieties, named C(60)-s-Tripod, C(60)-l-Tripod, and PI-Tripod, were synthesized and introduced into a porphyrin macroring N-(1-Zn)(3) (where 1-Zn = trisporphyrinatozinc(II)). From UV-vis absorption and fluorescence titration data, the binding constants of C(60)-s-Tripod, C(60)-l-Tripod, and PI-Tripod with N-(1-Zn)(3) in benzonitrile were estimated to be 3 × 10(8), 1 × 10(7), and 2 × 10(7) M(-1), respectively. These large binding constants denote multiple interactions of the ligands to N-(1-Zn)(3). The binding constants of the longer ligand (C(60)-l-Tripod) and the pyromellitdiimide ligand (PI-Tripod) are almost the same as those without the fullerene or pyromellitdiimide groups, indicating that they interact via three pyridyl groups to the porphyrinatozinc(II) coordination. In contrast, the larger binding constants and the almost complete fluorescence quenching in the case of the shorter ligand (C(60)-s-Tripod) indicate that the interaction with N-(1-Zn)(3) is via two pyridyl groups to the porphyrinatozinc(II) coordination and a π-π interaction of the fullerene to the porphyrin(s). The fluorescence of N-(1-Zn)(3) was quenched by up to 80% by the interaction of C(60)-l-Tripod. The nanosecond transient absorption spectra showed only the excited triplet peak of the fullerene on selective excitation of the macrocyclic porphyrins, indicating that energy transfer from the excited N-(1-Zn)(3) group to the fullerenyl moiety occurs in the C(60)-l-Tripod/N-(1-Zn)(3) composite. In the case of PI-Tripod, the fluorescence of N-(1-Zn)(3) was quenched by 45%. It seems that the fluorescence quenching probably originates from electron transfer from the excited N-(1-Zn)(3) group to the pyromellitdiimide moiety.     

An efficient approach for the characterization of mucin-type glycopeptides: the effect of O-glycosylation on the conformation of synthetic mucin peptides

Despite the growing importance of mucin core O-glycosylation in many biological processes including the protection of epithelial cell surfaces, the immune response, cell adhesion, inflammation, and tumorigenesis/metastasis, the regulation mechanism and conformational significance of the multiple introduction of α-GalNAc residues by UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferases (ppGalNAcTs) remains unclear. Here we report an efficient approach by combining MS and NMR spectroscopy that allows for the identification of O-glycosylation site(s) and the effect of O-glycosylation on the peptide backbone structures during enzymatic mucin domain assembly by using an isoform UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-T2 (ppGalNAcT2) in vitro. An electron-capture dissociation device in a linear radio-frequency quadrupole ion trap (RFQ-ECD) combined with a time-of-flight (TOF) mass spectrometer was employed for the identification of Thr/Ser residues occupied by α-GalNAc branching among multiple and potential O-glycosylation sites in the tandem repeats of human mucin glycoproteins MUC4 (Thr-Ser-Ser-Ala-Ser-Thr-Gly-His-Ala-Thr-Pro-Leu-Pro-Val-Thr-Asp) and MUC5AC (Pro-Thr-Thr-Val-Gly-Ser-Thr-Thr-Val-Gly). In the present study, O-glycosylation was initiated specifically at Thr10 in naked MUC4 peptide and additional introduction of α-GalNAc proceeded preferentially but randomly at three other Thr residues to afford densely glycosylated MUC4 containing six α-GalNAc residues at Thr1, Ser2, Ser5, Thr6, Thr10, and Thr15. On the contrary, O-glycosylation of naked MUC5AC peptide occurred predominantly at consecutive Thr residues and led to MUC5AC with four α-GalNAc residues at Thr2, Thr3, Thr7, and Thr8. The solution structures determined by NMR spectroscopic studies elicited that the preferential introduction of α-GalNAc at Thr10 of MUC4 stabilizes specifically a β-like extended backbone structure at this area, whereas other synthetic models with a single α-GalNAc residue at Thr1, Thr6, or Thr15 did not exhibit any converged three-dimensional structure at the proximal peptide moiety. Such conformational impact on the underlying peptides was proved to be remarkable in the glycosylation at the consecutive Thr residues of MUC5AC.     

Fluid simulation and X-ray CT images for soot deposition in a diesel filter

Recently, stricter diesel particulate emission standards have been set in many countries. As for the after-treatment of exhaust gas, a diesel filter has been developed to trap diesel particles inside small-scale porous structure. Since measurement of flow in the filter is impossible, the phenomena of particle deposition in the filter are not well understood. In this study, we conducted Lattice Boltzmann simulation on flow in the newly developed diesel filter. The soot deposition was included to consider the particle trap in the filter. The inner structure of the diesel filter as well as trapped soot region was scanned by an X-ray CT technique. Results show that the flow pattern is largely changed when the soot is attached to the filter surface. By comparing simulation results with CT images, soot accumulation region is well predicted. It is found that the amount of trapped soot is proportional to the filter back-pressure even when soot deposition probability is changed.     

Mechanistic studies of hydrogen-peroxide-mediated anthocyanin oxidation

The oxidation of cyanidin-3-O-glucoside by hydrogen peroxide was investigated in a range of solvents. The reaction products had chemical structures identical to those formed by the reaction of this compound with the alkylperoxyl radical 2,2?-azobis(2,4-dimethyl)valeronitrile. A plausible oxidation mechanism was proposed based on the obtained reaction products, and this mechanism was confirmed by HPLC–MS experiments using ¹⁸O-labeled reagents. Further, the reaction conditions were found to influence both the reaction rate and the products formed during the transformation, which validated the proposed mechanism.     

Restructuring of the bleomycin metal core. Novel oxygen-activating ligands with symmetrized structure

Novel ligands having symmetrized coordination environment consisting of two histidine units and a pyridine are prepared. Oxygen activating efficiency of the iron complexes of the synthetic ligands increases by introducing electron donating substituent into the pyridine ring.     

Characteristics of proflavine solubilized in complexes of anionic polymers with a cationic surfactant

Absorption and emission spectra of 3,6-diaminoacridine (proflavine) are reported in mixed solutions of dodecyltrimethylammonium bromide (DTAB) with various polyelectrolytes including the sodium salts of poly(acrylic acid) (PAA). poly(methacrylic acid) (PMA), poly(styrenesulfonic acid) (PSS), poly(garacturonic acid) (pectate), and the alternating copolymers of maleic acid with ethylene (PMA-E) and styrene (PMA-S). The spectral change indicates the association of the dye (blue-shift) on these polyions except on PSS, the easy dissociation of the aggregated form into the monomeric form and the solubilization into the hydrophobic PMA-S/DTAB complex (red-shift), the little dissociation in the PAA/DTAB, PMA/DTAB and PMA-E/DTAB complexes, and the liberation of the bound dye in the case of pectate/DTAB complexes. In the PSS system, the strong interaction of the dye with the styrene groups induces the completely different spectral behavior. These results are discussed with the cooperative binding of the dye and the surfactant ion.     

Trifluoroethylxanthate as an analytical reagent: Spectrophotometric determination of cobalt and copper as their trifluoroethylxanthates

Summary A direct spectrophotometric method has been developed for the micro-determination of Co(II) and Cu(II) as their trifluoroethylxanthates, by use of aqueous acetone medium. The reagent and methods have been found selective and sensitive for the determination of these metals in certain alloys.

---

Trifluorethylxanthat als analytisches Reagens: Spektrophotometrische Bestimmung von Kobalt und Kupfer

Zusammenfassung Eine direkte spektrofluorimetrische Methode zur Mikrobestimmung von Co(II) und Cu(II) in Form ihrer Trifluorethylxanthate in wäßrigem Acetonmedium wurde ausgearbeitet. Reagens und Methode sind bei der Bestimmung der genannten Metalle in gewissen Legierungen selektiv und empfindlich.