Triplet state sublevel spectroscopy applied to proteins

Triplet state sublevel spectroscopy using optical detection of magnetic resonance (ODMR) in zero magnetic field can be successfully employed to study (i) the environment of tryptophan (Trp) residues in a protein by observing the position and structure of phosphorescence spectra, zero field ODMR transitions and triplet state sublevel kinetics, (ii) the energy transfer among Trp residues, and (iii) whether any cysteine (Cys) residue is within van der Waals distance of any Trp residue by studying the complex of the protein with methylmercury(II) iodide (CH₃HgI) which binds to Cys residues. These studies are particularly important where crystal structure study is not possible. Study of the S₁ state often gives ambiguous results since fluorescence is always broad and shows multi-exponential decay. Our results on bacteriophage lysozyme T4 which contains three Trp residues at positions 126, 138 and 158 are presented. Measurements were facilitated by the use of a mutated enzyme containing one or two Trp-Tyr substitutions. The results indicate that (i) Trp 126 and 158 are solvent exposed, whereas Trp 138 is buried in a hydrophobic environment, (ii)S ↔S non-radiative energy transfer takes place predominantly from Trp 126 to Trp 158, and (iii) only Trp-158 undergoes a heavy atom perturbation, which affects selectively the z-sublevel (z is an out-of-plane axis of the indole plane) as a result of CH₃HgI binding to nearby Cys 97. We suggest that the Hg atom is located on the z-axis of Trp 158 in the complex. This interpretation is based on our investigations on the effect of orientation of heavy atom perturbers in some naphthalene-crown ether metal ion complexes.     

On use of ghost-less beam splitter in reversal shear interferometer for measurement of spatial coherence of large cross-section laser beam

A configuration of reversal shear interferometer suitable for measurement of spatial coherence of high average power, large cross-section laser beam has been discussed. Ghost-less beam splitters in which unwanted multiple reflections from the surfaces have been suppressed by total internal reflection are used for beam splitting and re-combination. Advantages and drawbacks of this configuration have been discussed.     

Anisotropic spin—lattice relaxation in the triplet state of naphtralene-h8 in n-pentane

The temperature dependence of the individual spin—lattice relaxation rate constants (W_ij) between the lowest triplet sublevels of naphthalene-h₈ in a polycrystalline Shpol'skii matrix of n-pentane have been measured between 1.2 and 2.4 K in zero field. The total sublevel decay constants are evaluated and found to be independent of temperature. The W_ij are found to be highly anisotropic, but the anisotropy pattern differs from that observed previously in a durene matrix.     

Structural characterization of pseudo-binary semiconducting alloys using molecular simulations

Monte Carlo simulations with the Keating model have been performed to predict the lattice constant and bond length variations with composition for pseudo-binary semiconducting alloys. In general, it is observed that the deviations of the lattice constants from Vegard's law predictions are larger as the lattice mismatch between the constituent binaries increases. Further, it is noted that these alloys have partial virtual crystal model characteristics and tend to be more towards the flexible (floppy) crystal limit as compared to the rigid crystal limit. The topological rigidity parameters are bond-type dependent. The angular deviations from perfect tetrahedral structure are also measured.     

Synthesis,X-ray crystal structure,DFT calculations,spectroscopic characterization and redox behaviour of a rhodium(III) complex of an anthracene–pyridylhydrazone ligand

Transition Metal Chemistry - A pyridylhydrazone incorporating an anthracene moiety, designated as HLAnc, has been synthesized in order to examine its coordination behaviour towards rhodium(III)....     

Non-Hermitian systems of Euclidean Lie algebraic type with real energy spectra

We study several classes of non-Hermitian Hamiltonian systems, which can be expressed in terms of bilinear combinations of Euclidean–Lie algebraic generators. The classes are distinguished by different versions of antilinear (PT)-symmetries exhibiting various types of qualitative behaviour. On the basis of explicitly computed non-perturbative Dyson maps we construct metric operators, isospectral Hermitian counterparts for which we solve the corresponding time-independent Schrödinger equation for specific choices of the coupling constants. In these cases general analytical expressions for the solutions are obtained in the form of Mathieu functions, which we analyze numerically to obtain the corresponding energy spectra. We identify regions in the parameter space for which the corresponding spectra are entirely real and also domains where the PT symmetry is spontaneously broken and sometimes also regained at exceptional points. In some cases it is shown explicitly how the threshold region from real to complex spectra is characterized by the breakdown of the Dyson maps or the metric operator. We establish the explicit relationship to models currently under investigation in the context of beam dynamics in optical lattices.     

Solvent‐Mediated Functionalization of Benzofuroxan on Electron‐Rich Ruthenium Complex Platform

An unprecedented reactivity profile of biochemically relevant R‐benzofuroxan (R=H, Me, Cl), with high structural diversity and molecular complexity on a selective {Ru(acac)₂} (acac=acetylacetonate) platform, in conjugation with EtOH solvent mediation, is revealed. This led to the development of monomeric [Ru^III(acac)₂(L^1R)] ( 1 a – 1 c ; L^1R=2‐nitrosoanilido derivatives) and dimeric [{Ru^II(acac)₂}₂(L^2R)] ( 2 a – 2 b ; L^2R=(1E,2E)‐N¹,N²‐bis(2‐nitrosophenyl)ethane‐1,2‐diimine derivatives) complexes in one pot with a change in the metal redox conditions. The functionalization of benzofuroxan in 1 and 2 implied in situ reduction of N=O to NH^? in the former and solvent‐assisted multiple N?C coupling in the latter. The aforesaid transformation processes were authenticated through structural elucidation of representative complexes, and evaluated by their spectroscopic/electrochemical features, along with C₂D₅OD labeling and monitoring of the impact of substituents (R) in the benzofuroxan framework on the product distribution process. The noninnocent potential of newly developed L¹ and L² in 1 and 2 , respectively, was also probed by spectroelectrochemistry in combination with DFT calculations.