Liquid crystalline dispersions of complexes formed by chitosan with double-stranded nucleic acids

Double-stranded molecules of nucleic acids (NAs) were shown to interact with chitosans to form under certain conditions (chitosan molecular mass, content of amino groups, distance between amino groups, pH of solution, etc.) multiple types of liquid crystalline dispersions. The dispersions formed are different in their spatial structures, and hence in the sense and magnitude of the abnormal optical activity. The physicochemical properties of these dispersions were investigated. Time- and temperature-stabilization of dispersions that possess abnormal optical activity were achieved by chemical crosslinking of chitosan molecules in the liquid crystalline dispersions formed from NA-chitosan complexes. The accessibility of these 'NA-liquid crystalline elastomers' with respect to enzyme and drug action was tested. The multiplicity of liquid crystalline forms of DNA-chitosan complexes was possibly explained by the influence of the character of the dipole distribution over the surface DNA molecules on the sense of the spatial twist of the cholesteric liquid crystalline dispersions resulting from these complexes.     

Magnetic properties of copper as a constituent of nanobridges formed between spatially fixed deoxyribonucleic acid molecules

The number of copper ions as constituents of a nanobridge that links two deoxyribonucleic acid (DNA) molecules that are fixed in a particle of a liquid-crystalline dispersion has been evaluated from the measurements of the magnetic susceptibility of particles in the liquid-crystalline dispersion of DNA. It has been shown that the experimental data are consistent with both theoretical assumptions on the possible structure of a nanobridge and a thermodynamic model that describes the formation of these bridges.     

A novel type of microscopic size chip based on double-stranded nucleic acids

The double-stranded molecules of nucleic acids (NA) of B- and A-families fixed in the structure of cholesteric liquid-crystalline dispersions, formed as a result of phase exclusion of these molecules from polymer-containing solution, have been used as 'building blocks' for the molecular design. Using the formation of polymeric chelate bridges between NA molecules, three-dimensional structures consisting of alternating NA, anthracycline and copper ions, were created. The formation of the polymeric chelate bridges allows one to stabilize the initial spatial mode of ordering of neighboring NA molecules in a form of so-called 'molecular constructions', immobilize these constructions onto supporting film and evaluate their sizes and shape. The creation of NA molecular constructions is accompanied by an 'extra-increase' in the amplitude of the bands in the CD spectra, despite the initial sense of cholesteric twisting characteristic of liquid-crystalline dispersions. Destroying of polymeric chelate bridges between NA molecules by action of biologically relevant compounds results in disintegration of NA liquid-crystalline molecular constructions. Three-dimensional NA molecular construction can be used as a microscopic size multifunctional chemical unit (chip) for biological or chemical needs.     

PHOTOCHEMICAL ALTERATIONS IN DNA REVEALED BY DNA-BASED LIQUID CRYSTALS

Abstract The preparations of chicken erythrocyte linear double-stranded DNA and superhelical plasmid pBR322 DNA were irradiated by continuous low-intensity UV radiation (I = 25-50 W/m², λ= 254 nm) as well as by highintensity picosecond laser UV radiation (I = 10¹¹-10¹³ W/m², λ= 266 nm). The effect of DNA secondary structure alterations on the formation of liquid-crystalline dispersions from UV-irradiated DNA preparations was studied. It was shown that in the case of linear DNA, watching the disappearance of abnormal optical activity characteristic for cholesteric liquid crystal we managed to detect the presence of photochemical alterations in DNA irradiated by low-intensity UV radiation at an absorbed energy of more than 20 quanta per nucleotide. In the case of superhelical DNA using enzyme treatment of liquid-crystalline dispersions and monitoring the appearance of abnormal optical activity, we detected the presence of photochemical alterations in DNA molecules after low-intensity UV irradiation at an absorbed energy of less than 4 quanta per nucleotide. Under the latter approach using picosecond UV laser irradiation at three different light intensities we were able to distinguish the different mechanisms of fine alterations in DNA secondary structure at an absorbed energy value of about 3 quanta per nucleotide.     

Interaction of nucleic acid segments as a result of modification of the network of hydrogen bonds of the solvent

It is shown that experimental results on the influence of various factors in the formation efficiency and structure of cholesteric liquid-crystal dispersions of nucleic acids cannot be consistently described using conventional theories of liquid crystal formation. A new model is proposed for the interaction of nucleic acid segments which allows for a change in the particular structure of the solvent hydrogen bonds in the presence of nucleic acid molecules. The conclusions of the model agree with existing spectroscopic and structural investigations of DNA dispersions. According to our model, interaction between nucleic acid molecules and solvent modifies proton tunneling processes in the latter, leading to effective interaction between the nucleic acids. A theoretical analysis of the model is made using a pseudospin formalism in which the effective interaction potential of the nucleic acid segments is calculated. It is shown that this potential may lead to nematic ordering for small distances between the nucleic acid molecules (R ≤ 30 Å) and cholesteric ordering for large distances.     

Liquid crystalline dispersions of complexes formed by chitosan with double-stranded nucleic acids

Double-stranded molecules of nucleic acids (NAs) were shown to interact with chitosans to form under certain conditions (chitosan molecular mass, content of amino groups, distance between amino groups, pH of solution, etc.) multiple types of liquid crystalline dispersions. The dispersions formed are different in their spatial structures, and hence in the sense and magnitude of the abnormal optical activity. The physicochemical properties of these dispersions were investigated. Time- and temperature-stabilization of dispersions that possess abnormal optical activity were achieved by chemical crosslinking of chitosan molecules in the liquid crystalline dispersions formed from NA–chitosan complexes. The accessibility of these ‘NA–liquid crystalline elastomers' with respect to enzyme and drug action was tested. The multiplicity of liquid crystalline forms of DNA–chitosan complexes was possibly explained by the influence of the character of the dipole distribution over the surface DNA molecules on the sense of the spatial twist of the cholesteric liquid crystalline dispersions resulting from these complexes.