Evidence that the fully assembled capsid of Leishmania RNA virus 1-4 possesses catalytically active endoribonuclease activity

In this study, Leishmania RNA virus 1-4 (LRV1-4) particles purified from host Leishmania guyanensis promastigotes were examined for capsid endoribonuclease. Temperature optimum for the endoribonuclease activity was found to be at 37(O)C to 42(O)C and the activity was specifically inhibited by the aminoglycoside antibiotics, neomycin, kanamycin, and hygromycin and by 100 mM levels of NaCl or KCl. To determine the catalytic domain of the capsid endoribonuclease activity, three point-mutation at cysteine residues at C47S (P1), C128/ 133S (P2), and C194R (P3) were prepared and each gene was constructed into baculoviruses and expressed in Sf9 insect cells. LRV1-4 capsid N- terminus (N2 and N3) and C-terminus (C1 and C2) deletion mutants (Cadd et al., 1994) were also examined by in vitro RNA cleavage assay. The results showed that the capsid mutants; C1, C2, N3, P1, and P2 were capable of forming proper virus-like particles (VLPs) and they all possessed the specific endoribonuclease activity. However, two assembly-defective capsid mutants, N2 (N- terminus 24-amino acids deletion) and P3 mutants, did not retain the specific endoribonuclease activity. Taken together, the results suggest that at least 24 amino acids from the N-terminal region and C194 residue in LRV1-4 capsid protein are functionally important for LRV1-4 viral assembly and the capsid endoribonuclease activity may be dependent upon the properly assembled LRV1-4 virus particles.     

Monitoring small defects on surface microstructures through backscattering measurements

The detection and characterization of small defects on particles or structures of a size comparable with the incident wavelength and located on flat substrates is numerically analyzed. For metallic scattering systems, calculations based on the extinction theorem of physical optics show that geometrical information about a small Gaussian defect can be obtained by partially integrating the backscattering patterns.     

Molecular basis of carbon dioxide transport in polycarbonate membranes

Gas transport of carbon dioxide in poly[bisphenol A carbonate-co-4,4'-(3,3,5-trimethylcyclohexylidene)diphenol carbonate] films over a wide range of pressure is described. The interpretation of the experimental results in terms of the dual mode model allowed the evaluation of the parameters of the model that govern the gas permeation process. The value of the diffusion coefficient obtained for carbon dioxide at zero concentration was 2.4 x 10(-8) cm(2) s(-1), at 303 K. This parameter was also measured by using pulsed field gradient NMR finding that its value reaches a nearly constant value of (2.7 +/- 0.9) x 10(-8) cm(2) s(-1), at 298 K, for diffusion times greater than 20 ms. Both the diffusion and solubility coefficients were also computed by using simulation methods based on the transition states theory and the Widom method, respectively. The value obtained for the diffusion coefficient was 1.8 x 10(-8) cm(2) s(-1), at 303 K, which compares very favorably with the experimental measurements. The drop of the simulated solubility coefficient with increasing pressure is sharper than that of the experimental one, at low pressures, and similar, at high pressures.     

The nature of black stains in Lascaux Cave,France, as revealed by surface‐enhanced Raman spectroscopy

We used surface‐enhanced Raman spectroscopy to investigate the chemical composition of the black stains threatening the rock‐art paintings of Lascaux Cave, Montignac, France. The stains are mainly composed of melanin from the fungus Ochroconis sp. and the faecal pellets of the collembolan Folsomia candida. Surface‐enhanced Raman spectroscopy is a useful technique for revealing the structure of unknown macromolecules in cultural heritage research. Copyright © 2011 John Wiley & Sons, Ltd.     

Optical performance of a versatile illumination system for high divergence LED sources

An efficient flat-top illuminating optical system optimized for an extended light source is presented. The source is a high-brightness high divergence light emitting diode (LED), sized 1 mm × 1 mm, producing monochromatic emission (525 ± 5 nm) with viewing angle of 130°. The design is based on a rotationally symmetrical catadioptric system, developed on a geometrical optics basis, and modelled with ZEMAX^® software. The device consists of two optical systems: (i) a collimating system which, in turn, is formed by an aspheric lenses system (low numerical apertures, NA < 0.26) and two-mirror system (0.26 < NA < 0.86), and (ii) an external mirror (NA > 0.86) designed and optimized for each purpose. By itself, the collimating system works with a residual divergence of θ_C = 1.46°. The external mirror can be adequately designed to produce some given conditions. For instance, a flat-top profile is obtained in the selected focusing plane, with a maximum transversal intensity variation of 2.5% over 18 mm. In addition, when the focusing mirror is allowed to move along the optical axis in a ±1 mm range, other interesting profiles can be reached for a given working distance, therefore increasing the versatility of the system.