Mining Symbionts of a Spider‐Transmitted Fungus Illuminates Uncharted Biosynthetic Pathways to Cytotoxic Benzolactones

A spider‐transmitted fungus (Rhizopus microsporus) that was isolated from necrotic human tissue was found to harbor endofungal bacteria (Burkholderia sp.). Metabolic profiling of the symbionts revealed a complex of cytotoxic agents (necroximes). Their structures were characterized as oxime‐substituted benzolactone enamides with a peptidic side chain. The potently cytotoxic necroximes are also formed in symbiosis with the fungal host and could have contributed to the necrosis. Genome sequencing and computational analyses revealed a novel modular PKS/NRPS assembly line equipped with several non‐canonical domains. Based on gene‐deletion mutants, we propose a biosynthetic model for bacterial benzolactones. We identified specific traits that serve as genetic handles to find related salicylate macrolide pathways (lobatamide, oximidine, apicularen) in various other bacterial genera. Knowledge of the biosynthetic pathway enables biosynthetic engineering and genome‐mining approaches.     

Synergistic Effect of Propidium Iodide and Small Molecule Antibiotics with the Antimicrobial Peptide Dendrimer G3KL against Gram-Negative Bacteria

There is an urgent need to develop new antibiotics against multidrug-resistant bacteria. Many antimicrobial peptides (AMPs) are active against such bacteria and often act by destabilizing membranes, a mechanism that can also be used to permeabilize bacteria to other antibiotics, resulting in synergistic effects. We recently showed that G3KL, an AMP with a multibranched dendritic topology of the peptide chain, permeabilizes the inner and outer membranes of Gram-negative bacteria including multidrug-resistant strains, leading to efficient bacterial killing. Here, we show that permeabilization of the outer and inner membranes of Pseudomonas aeruginosa by G3KL, initially detected using the DNA-binding fluorogenic dye propidium iodide (PI), also leads to a synergistic effect between G3KL and PI in this bacterium. We also identify a synergistic effect between G3KL and six different antibiotics against the Gram-negative Klebsiella pneumoniae, against which G3KL is inactive.     

On the effect of the carbonaceous substrate in the nucleation of Sn nanoparticles for Li-ion anodes: experiments and first principles calculations

The nucleation of Sn nanoparticles by chemical reduction was studied using three different carbonaceous substrates, to obtain Sn/C composites. When used as active materials in anodes for lithium-ion batteries, these composites displayed higher capacities than commercially used graphite, and showed a good cyclability. The differences in morphology, capacity, cyclability, and diffusion between the resulting materials are highlighted. The resulting materials were characterized by charge-discharge cycling, voltammetry, EIS, SEM, and TEM microscopy. It was found that the substrate has a determinant effect on the deposition of Sn. This effect is interpreted in terms of the relative adsorption energies of a single Sn atom obtained from DFT calculations.

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Fictitious domain approach for numerical modelling of Navier–Stokes equations

This study investigates a fictitious domain model for the numerical solution of various incompressible viscous flows. It is based on the so‐called Navier–Stokes/Brinkman and energy equations with discontinuous coefficients all over an auxiliary embedding domain. The solid obstacles or walls are taken into account by a penalty technique. Some volumic control terms are directly introduced in the governing equations in order to prescribe immersed boundary conditions. The implicit numerical scheme, which uses an upwind finite volume method on staggered Cartesian grids, is of second‐order accuracy in time and space. A multigrid local mesh refinement is also implemented, using the multi‐level Zoom Flux Interface Correction (FIC) method, in order to increase the precision where it is needed in the domain. At each time step, some iterations of the augmented Lagrangian method combined with a preconditioned Krylov algorithm allow the divergence‐free velocity and pressure fields be solved for. The tested cases concern external steady or unsteady flows around a circular cylinder, heated or not, and the channel flow behind a backward‐facing step. The numerical results are shown in good agreement with other published numerical or experimental data. Copyright © 2000 John Wiley & Sons, Ltd.     

Quasiclassical dynamics of resonantly driven Rydberg states

We present a semiclassical analysis of the dynamics of Rydberg states of atomic hydrogen driven by a resonant microwave field of linear polarization. The semiclassical quasienergies of the atom in the field are found to be in very good agreement with the exact quantum solutions. The ionization rates of individual eigenstates of the atom dressed by the field reflect their quasiclassical dynamics along classical periodic orbits in the near integrable regime, but exhibit a transition to nonspecific rates when global chaos takes over in phase space. We concentrate both on the principal resonance where the unperturbed Kepler frequency is equal to the driving field frequency and on the higher primary resonance The latter case allows for the construction of nondispersive wave packets which propagate along Kepler ellipses of intermediate eccentricity. Received: 23 June 1998 / Accepted: 10 November 1998     

THE UV ACTION SPECTRA FOR THE CLONE-FORMING ABILITY OF CULTURED HUMAN MELANOCYTES AND KERATINOCYTES

Abstract Melanocytes (skin type 2) and keratinocytes were irradiated with UV light of 254, 297, 302, 312 and 365 nm and the survival was measured. Clone-forming ability was chosen as the parameter for cell survival. Melanocytes were found to be less sensitive to UV light than keratinocytes (a difference of a factor 1.22-1.92 for the UV-C and UV-R wavelengths (254, 297, 301 and 312 nm) and a factor 6.71 for the UV-A wavelength (365 nm). Because melanin does not appear to protect against the induction of pyrimidine dimers the difference between melanocytes and keratinocytes in the UV-C and UV-B region could not be explained by the presence of melanin in the melanocytes. The relatively small difference can be explained by the longer cell cycle of melanocytes, which provides more time for the melanocytes to repair UV damage. In the UV-A region the difference between melanocytes and keratinocytes was much larger, suggesting that besides the longer cell cycle some additional factors must be involved in protection against UV-A light.     

Simultaneous measurement of the solubility of nitrogen and carbon dioxide in polystyrene and of the associated polymer swelling

New experimental results for the solubility of nitrogen and carbon dioxide in polystyrene are reported, accompanied by data on the change in volume of the polymer caused by the sorption process. The two phenomena were measured simultaneously with a combined technique, in which the quantity of penetrating fluid introduced into the system was evaluated by pressure‐decay measurements in a calibrated volume, whereas a vibrating‐wire force sensor was employed for weighing the polymer sample during sorption inside of the high‐pressure equilibrium cell. The use of the two techniques was necessary because the effects of swelling and solubility could not be decoupled in a single gravimetric or pressure‐decay measurement. The sorption of nitrogen in polystyrene was studied along three isotherms from 313 to 353 K at pressures up to 70 MPa. The sorption of carbon dioxide was measured along four isotherms from 338 to 402 K up to 45 MPa. The results are compared with values from the literature when possible, although our data extend significantly the pressure ranges of the latter. The uncertainties affecting our measurements with nitrogen are 1 mg of N₂/g of polystyrene in solubility and 0.1% of the volume of the polymer. For carbon dioxide, the uncertainties are 5 mg of N₂/g of polystyrene and 0.5% respectively, carbon dioxide being about 1 order of magnitude more soluble than nitrogen. © 2001 John Wiley & Sons, Inc. J Polym Sci Part B: Polym Phys 39: 2063–2070, 2001