Selenadiazolopyridine: a synthon for supramolecular assembly and complexes with metallophilic interactions

The synthesis and characterization of the complexes of Cu(I), Ag(I), Cu(II), and Co(II) ions with 1,2,5-selenadiazolopyridine (psd) is reported. The following complexes have been prepared: [Cu(2)(psd)(3)(CH(3)CN)(2)](2+)2(PF(6)(-)); [(CuCl)(2)(psd)(3)]; [Cu(2)(psd)(6)](2+)2(ClO(4))(-); [Ag(2)(psd)(2)](2+)2(NO(3))(-); [Ag(2)(psd)(2)](2+)2(CF(3)COO)(-); [Cu(psd)(2)(H(2)O)(3)](2+)2(ClO(4))(-)·(psd)(2); [Cu(psd)(4)(H(2)O)](2+)2(ClO(4))(-)·(CHCl(3)); [Cu(psd)(2)(H(2)O)(3)](2+)2(NO(3))(-)·(H(2)O)·(psd)(2), and [Co(psd)(2)(H(2)O)(4)](2+)2(ClO(4))(-)·(psd)(2). The electronic structure of ligand psd, in particular the bond order of Se-N bonds, has been probed by X-ray diffraction, (77)Se NMR, and computational studies. A detailed analysis of the crystal structures of the ligand and the complexes revealed interesting supramolecular assembly. The assembly was further facilitated by the presence of neutral ligands for some complexes (Cu(II) and Co(II)). The molecular structure of the ligand showed that it was present as a dimer in the solid state where the monomers were linked by strong secondary bonding Se···N interactions. The crystal structures of Cu(I) and Ag(I) complexes revealed the dinuclear nature with characteristic metallophilic interactions [M···M] (M = Cu, Ag), while the Cu(II) and Co(II) complexes were mononuclear. The presence of M···M interactions has been further probed by Atoms in Molecules (AIM) calculations. The paramagnetic Cu(II) and Co(II) complexes have been characterized by UV-vis, ESI spectroscopy, and room temperature magnetic measurements.     

Formation of diaryl(allyl)phosphine in π -allyl palladium(II) induced cleavage of triarylphosphines

A reverse migration of allylic group from palladium to phosphorus and the formation of diaryl(allyl)phosphine in the π -allyl palladium(II) induced cleavage of triarylphosphines has been demonstrated.     

Reactions of phenyllithium with lithium aluminum hydride in diethyl ether

Reactions of phenyllithium with LiAlH₄ in diethyl ether have been studied in detail. Lithium hydride, as an insoluble solid, and LiAlPh_n H_4?n (where n = 2 or 3)_in solution, are formed when the PhLi to LiAlH₄ ratio is 2/1and 3/1. However, Li₃AlH₆ is formed when LiAlH₄ is added to an equimolar solution of PhLi in diethyl ether. The integrity of the products have been established by IR, NMR and X-ray powder diffraction pattern.     

Free vibrations of a beam-mass system with elastically restrained ends

The vibration problem of a beam with an arbitrarily placed concentrated mass and elastically restrained against rotation at either end is solved by using Laplace transforms. The effects on eigenfrequencies of the system produced by varying the ratios of the concentrated mass to the mass of the beam, stiffness of the end spring to the stiffness of the beam and position of the mass to the total length of the beam are presented. The effect of neglecting the mass of the beam is considered.     

Polarization studies by the TSC technique on a blend of cellulose acetate and polyvinyl acetate

The thermally stimulated current (TSC) technique has been used to study solvent-cast blends of a cellulose derivative with a vinyl polymer. TSC peaks are observed at 56, 80, and 120°C. Their origin is investigated because the TSC spectra of the blends differ from the spectra of the individual components. Data on blends with components in the weight ratios 25:75, 50:50, and 75:25 indicate that the 50:50 blend shows the greatest polarization. The enhancement of depolarization currents observed on blending is explained on the basis of a Maxwell–Wagner–Sillars polarization due to increased heterogeneity in the structure. Effects of forming conditions (time, temperature, field) on polarization have been investigated. Activation energies and relaxation times are calculated; there is good agreement between the values obtained from the initial-rise and the full-curve methods.     

Evidence for a single electron transfer mechanism in 1he reduction of aromatic nitrogen heterocycles with main group metal hydrides and dihydropyridyl metal complexes.

Direct spectroscopic (EPR) evidence is presented to support a single electron transfer mechanism to describe the reactions of various simple and complex hydrides of the main group elements and dihydropyridyl metal complexes with aromatic nitrogen heterocyclic compounds.     

A General Vehicle Routing Problem

In this paper, we study a rich vehicle routing problem incorporating various complexities found in real-life applications. The General Vehicle Routing Problem (GVRP) is a combined load acceptance and generalised vehicle routing problem. Among the real-life requirements are time window restrictions, a heterogeneous vehicle fleet with different travel times, travel costs and capacity, multi-dimensional capacity constraints, order/vehicle compatibility constraints, orders with multiple pickup, delivery and service locations, different start and end locations for vehicles, and route restrictions for vehicles. The GVRP is highly constrained and the search space is likely to contain many solutions such that it is impossible to go from one solution to another using a single neighbourhood structure. Therefore, we propose iterative improvement approaches based on the idea of changing the neighbourhood structure during the search.     

Rapid and accurate estimation of protein–ligand relative binding affinities using site-identification by ligand competitive saturation

Predicting relative protein–ligand binding affinities is a central pillar of lead optimization efforts in structure-based drug design. The site identification by ligand competitive saturation (SILCS) methodology is based on functional group affinity patterns in the form of free energy maps that may be used to compute protein–ligand binding poses and affinities. Presented are results obtained from the SILCS methodology for a set of eight target proteins as reported originally in Wang et al. (J. Am. Chem. Soc., 2015, 137, 2695–2703) using free energy perturbation (FEP) methods in conjunction with enhanced sampling and cycle closure corrections. These eight targets have been subsequently studied by many other authors to compare the efficacy of their method while comparing with the outcomes of Wang et al. In this work, we present results for a total of 407 ligands on the eight targets and include specific analysis on the subset of 199 ligands considered previously. Using the SILCS methodology we can achieve an average accuracy of up to 77% and 74% when considering the eight targets with their 199 and 407 ligands, respectively, for rank-ordering ligand affinities as calculated by the percent correct metric. This accuracy increases to 82% and 80%, respectively, when the SILCS atomic free energy contributions are optimized using a Bayesian Markov-chain Monte Carlo approach. We also report other metrics including Pearson''s correlation coefficient, Pearlman''s predictive index, mean unsigned error, and root mean square error for both sets of ligands. The results obtained for the 199 ligands are compared with the outcomes of Wang et al. and other published works. Overall, the SILCS methodology yields similar or better-quality predictions without a priori need for known ligand orientations in terms of the different metrics when compared to current FEP approaches with significant computational savings while additionally offering quantitative estimates of individual atomic contributions to binding free energies. These results further validate the SILCS methodology as an accurate, computationally efficient tool to support lead optimization and drug discovery.

Predicting relative protein–ligand binding affinities is a central pillar of lead optimization efforts in structure-based drug design.     

Enhancing the dissolution of hydrophobic guests using solid state inclusion complexation: characterization and in vitro evaluation

The objectives of the present investigation were to prepare and characterize solid inclusion complexes of Etodolac (ETD) with β-cyclodextrin (β-CD) in order to study the effect of complexation on the dissolution rate of ETD, a hydrophobic guest molecule. Phase solubility curve was classified as a typical A_L-type for the cyclodextrins (CD’s), showing that soluble complex was formed. The inclusion complexes in the molar ratio of 1:1 and 1:2 (β-CD–ETD) were prepared by various methods such as kneading, co-evaporation and in molar ratio of 1:1 by spray dried technique respectively. The molecular behaviors of ETD in all samples were characterized by nuclear magnetic resonance (NMR) spectroscopy, fourier-transform infrared (FTIR) spectroscopy, differential scanning calorimetry (DSC) and powder X-ray diffraction (PXRD) studies and Scanning Electron microscopy (SEM) analysis. The results of these studies indicated that complexes prepared by kneading, co-evaporation and spray drying techniques showed inclusion of the ETD molecule into the CD’s cavities. The highest improvement in in vitro dissolution profiles was observed in complexes prepared with spray dried technique. Mean in vitro dissolution time indicated significant difference between the release profiles of ETD from complexes and physical mixtures and from pure ETD.