Rheological properties of liver actin solutions

G-actin prepared from pork liver and purified to give a product of 95–98% purity was polymerized to F-actin in a rotational dynamic viscometer. The rheological properties were investigated during the course of polymerisation and after polymerisation. G andG measured at frequencies around 0.1 Hz increased strongly during the first 3 hours of the reaction and then slowly approached a constant value in the range of 10–50 mPa. The rise during polymerisation was more than two orders of magnitude. When a solution of F-actin was subjected to steady shear at a high shear rate for a short period of time and subsequently dynamic measurements were performed, then a considerably smallerG (about 70% smaller) was observed immediately after cessation of the steady shear.G then increased with time and approached its initial value.When measuring the viscosity of F-actin solutions as a function of shear rate, a strong shear thinning effect was seen which did not vanish even at shear rates as low as 0.001 s^–1. Even at this low shear rates, a pronounced yield maximum was observed before reaching the steady state. Oscillatory experiments showed a remarkably weak frequency dependence ofG. The results imply that F-actin solutions are largely structured forming a weak temporary network which can be easily destroyed by application of high shear rates. It seems most likely that the destruction occurs by a reversible, shear induced depolymerisation process.     

Normal cones of monomial primes

We explicitly calculate the normal cones of all monomial primes which define the curves of the form , where . All of these normal cones are reduced and Cohen-Macaulay, and their reduction numbers are independent of the reduction. These monomial primes are new examples of integrally closed ideals for which the product with the maximal homogeneous ideal is also integrally closed.

Substantial use was made of the computer algebra packages Maple and Macaulay2.

     

Systematic investigations of anthocyanin–metal interactions by Raman spectroscopy

The FT‐Raman spectra of the chloride salts of pelargonidin‐3‐glucoside, cyanidin‐3‐glucoside and delphinidin‐3‐glucoside, their structures at pH 5.0 and their interaction with aluminium and ferric ions are presented for the first time and discussed with regard to their spectroscopic response. Two marker bands at approximately 1510 and 1330/1350 cm⁻¹ and one band at approximately 1330/1350 cm⁻¹ were identified being characteristic for the formation of ferric and aluminium chelates, respectively, of cyanidin‐3‐glucoside and delphinidin‐3‐glucoside. In contrast, pelargonidin‐3‐glucoside, exhibiting one single hydroxyl group in the B‐ring, did not form metal chelates, which could be clearly demonstrated by missing marker bands. The formation of anthocyanin–metal chelates was also verified in model systems containing commercial sugar beet pectin and a pectic polysaccharide fraction isolated thereof, respectively. In addition, the absence of anthocyanin–metal chelates in systems prepared with citrate buffer was confirmed, and the effects of low and high methoxylated citrus pectins on chelate formation were studied. Copyright © 2012 John Wiley & Sons, Ltd.     

Onset of quark-hadron duality in pion electroproduction

A large data set of charged-pion (pi+/-) electroproduction from both hydrogen and deuterium targets has been obtained spanning the low-energy residual-mass region. These data conclusively show the onset of the quark-hadron duality phenomenon, as predicted for high-energy hadron electroproduction. We construct several ratios from these data to exhibit the relation of this phenomenon to the high-energy factorization ansatz of electron-quark scattering and subsequent quark-->pion production mechanisms.     

Abdominal imaging studies: comparison of diagnostic accuracies resulting from ultrasound, computed tomography, and magnetic resonance imaging in the same individual

We retrospectively compared the diagnostic accuracy of abdominal ultrasound (US), computed tomography (CT), and magnetic resonance imaging (MRI) studies performed on the same individual to determine the relative performance of these modalities in the evaluation of disease processes, arising from different intra-abdominal organ systems. We retrospectively reviewed all procedure codes accrued by our abdominal imaging section during a 1-year period to determine how many patients underwent all three imaging procedures in our institution within a 2-week interval. These cases were then further evaluated to determine: (1) the primary organ system of disease involvement, (2) the final diagnosis, and (3) the imaging modality that provided the most accurate information upon which appropriate medical management was based. Imaging findings were determined by review of diagnostic reports, and medical management was determined by chart review. Two thousand six hundred-ninety five patients underwent ultrasound, 4,394 patients underwent CT, and 872 patients underwent MRI for the investigation of abdominal disease. Among these 5,126 patients, 26 underwent sequential US, CT, and MRI evaluation within a two-week interval. Appropriate clinical management was based on the US findings in 12/26 cases (46%; 95% CI: 27-67%), CT findings in 16/26 cases (62%; 95% CI: 41-80%), and MRI findings in 24 cases (92%; 95% CI: 75-99%). Significant differences in directing appropriate clinical management were found when comparing the relative diagnostic accuracies of MRI to US (p = 0.0003) and MRI to CT (p = 0.009). However, differences were not significant when comparing CT to US (p = 0.27). All final diagnoses in a given patient were accurately determined by US in 7/26 cases (27%), by CT in 10/26 cases (38%), and by MRI in 23/26 cases (88%). When analyzed according to individual diagnoses (61 total), US detected 33 of 61 (54%) abnormalities, CT detected 41 (67%) abnormalities, and MRI detected 51 (84%) abnormalities. US correctly characterized 32 (52%) abnormalities, CT correctly characterized 36 (59%) abnormalities, and MRI correctly characterized 49 (80%) abnormalities. Ultrasound, CT, and MR imaging correctly diagnosed the disease process in 3 of 12 (25%), 3 of 12 (25%), and 10 of 12 (83%) patients, respectively, with liver disease; 2 of 9 (22%), 6 of 9 (66%), and 9 of 9 (100%) patients, respectively, with pancreatic disease; 17 of 17 (100%), 8 of 17 (47%), and 10 of 17 (58%) patients, respectively, with gallbladder and biliary disease; 2 of 8 (25%), 5 of 8 (63%), and 5 of 8 (63%) patients, respectively, with renal disease; 0 of 3 (0%), 2 of 3 (66%), and 3 of 3 (100%) patients, respectively, with adrenal disease; and 8 of 12 (75%), 12 of 12 (100%), and 12 of 12 (100%) patients with free intraperitoneal fluid. Our results provide new information, regarding the relative benefits of ultrasound, CT, and MRI for the investigation of abdominal diseases at our institution. This initial data suggests that ultrasound provides the most accurate diagnoses in the investigation of gallbladder disease; MRI provides the most accurate diagnoses in the investigation of hepatic, adrenal, and pancreatic disease; and either CT or MRI may be the most appropriate first imaging study for the detection of renal disease.     

Investigation of proton-proton short-range correlations via the 12C(e,e'pp) reaction

We investigated simultaneously the 12C(e,e'p) and 12C(e,e'pp) reactions at Q2=2 (GeV/c)2, xB=1.2, and in an (e, e'p) missing-momentum range from 300 to 600 MeV/c. At these kinematics, with a missing momentum greater than the Fermi momentum of nucleons in a nucleus and far from the delta excitation, short-range nucleon-nucleon correlations are predicted to dominate the reaction. For (9.5+/-2)% of the 12C(e,e'p) events, a recoiling partner proton was observed back-to-back to the 12C(e,e'p) missing-momentum vector, an experimental signature of correlations.     

Recent Progress with the SMILETRAP Penning Mass Spectrometer

The Penning trap mass spectrometer SMILETRAP has been considerably improved during the last two years. The helium pressure has been carefully stabilized and is now independent of irregular air pressure. The temperature of the hyperboloidal precision trap is stabilized to ±0.03°C. Remaining temperature instabilities are compensated by changes in the current of a warm coil surrounding the precision trap. The frequency synthesizer is now locked to GPS. This means that it is much easier to accurately measure resonances during several days. The improvements have demonstrated that in mass doublet measurements with an excitation time of 1 s it is possible to determine the mass of ions with q/A=1/2 at an uncertainty to a few times of 0.1 ppb, using selected rather than cooled ions. In routine measurements lasting for one day it is possible to reach a mass uncertainty of 1 ppb. The masses of the following particles and atoms have been measured with uncertainties in the region 0.3–2 ppb: p, ³H, ³He, ⁴He, ²²Ne, ²⁸Si, ³⁶Ar, ⁷⁶Ge, ⁷⁶Se, ⁸⁶Kr and ¹³³Cs. It has also been shown that though we are using a warm bore the trap pressure is sufficiently low to prevent electron capture from the rest gas for excitation times of 3 s and for ion charges as high as 50+. This revised version was published online in July 2006 with corrections to the Cover Date.     

Recognition of Dimethylarginine Analogues by Tandem Tudor Domain Protein Spindlin1

Epigenetic readout of the combinatorial posttranslational modification comprised of trimethyllysine and asymmetric dimethylarginine (H3K4me3R8me2a) takes place via biomolecular recognition of tandem Tudor-domain-containing protein Spindlin1. Through comparative thermodynamic data and molecular dynamics simulations, we sought to explore the binding scope of asymmetric dimethylarginine mimics by Spindlin1. Herein, we provide evidence that the biomolecular recognition of H3K4me2R8me2a is not significantly affected when R8me2a is replaced by dimethylarginine analogues, implying that the binding of K4me3 provides the major binding contribution. High-energy water molecules inside both aromatic cages of the ligand binding sites contribute to the reader–histone association upon displacement by histone peptide, with the K4me3 hydration site being lower in free energy due to a flip of Trp151.