Influence of the interatomic potential on thermotransport in binary liquid alloys: case study on NiAl

Equilibrium molecular dynamics simulation in conjunction with the Green-Kubo formalism is employed to study the transport properties of a model Ni₅₀Al₅₀ melt with the embedded-atom method potential developed in [G.P. Purja Pun, Y. Mishin, Phil. Mag., 2009, 89, 3245]. The principal objective of the work is to quantitatively characterise and analyse thermotransport in the system, i.e. diffusion driven by a temperature gradient. In addition, direct phenomenological coefficients for mass and thermal transport are also evaluated and analysed in the process. Furthermore, the results obtained are compared with previously published data for a different model of Ni₅₀Al₅₀ melt with an alternative embedded-atom method potential for the alloy as well as with experiment where possible. It is found that both potentials are able to consistently predict both direct transport coefficients over a wide temperature range. However, these two potentials are found to be inconsistent in characterising the cross-coupled heat and mass transport, predicting even different directions (sign) of the heat of thermotransport. The origin of this difference is discussed in the paper in detail.     

Different Spin‐State Behaviors in Isostructural Solvates of a Molecular Iron(II) Complex

The complex [FeL₂][BF₄]₂ ( 1 ; L=4‐(isopropylsulfanyl)‐2,6‐di(pyrazol‐1‐yl)pyridine) forms solvate crystals 1 ?solv (solv=MeNO₂, MeCN, EtCN, or Me₂CO). Most of these materials lose their solvent sluggishly on heating. However, heating 1 ?MeNO₂ at 450 K, or storing 1 ?EtCN under ambient conditions, leads to single‐crystal to single‐crystal exchange of the organic solvent for atmospheric moisture, forming 1 ?H₂O. Solvent‐free 1 ( 1 ?sf) can be generated in situ by annealing 1 ?H₂O at 370 K in the diffractometer or magnetometer. The different forms of 1 are isostructural (P2₁/c, Z=4) and most of them exhibit spin‐crossover (SCO) at 141≤T ≤212 K, depending on their solvent content. The exception is the EtCN solvate, whose pristine crystals remain high‐spin between 3–300 K. The cooperativity of the spin‐transitions depends on the solvent, ranging from gradual and incomplete when solv=acetone to abrupt with 17 K hysteresis when solv=MeCN. Our previously proposed relationship between molecular structure and SCO explains some of these observations, but there is no single structural feature that correlates with SCO in all the 1 ?solv materials. However, changes to the unit cell dimensions during SCO differ significantly between the solvates, and correlate with the SCO cooperativity. In particular, the percentage change in unit cell volume during SCO for the most cooperative material, 1 ?MeCN, is 10 times smaller than for the other 1 ?solv crystals.     

Dipolar chemical shift correlation spectroscopy for homonuclear carbon distance measurements in proteins in the solid state: application to structure determination and refinement

High-resolution solid-state NMR spectroscopy has become a promising tool for protein structure determination. Here, we describe a new dipolar-chemical shift correlation experiment for the measurement of homonuclear 13C-13C distances in uniformly 13C,15N-labeled proteins and demonstrate its suitability for protein structure determination and refinement. The experiments were carried out on the beta1 immunoglobulin binding domain of protein G (GB1). Both intraresidue and interresidue distances between carbonyl atoms and atoms in the aliphatic side chains were collected using a three-dimensional chemical shift correlation spectroscopy experiment that uses homogeneously broadened rotational resonance recoupling for carbon mixing. A steady-state approximation for the polarization transfer function was employed in data analysis, and a total of 100 intramolecular distances were determined, all in the range 2.5-5.5 A. An additional 41 dipolar contacts were detected, but the corresponding distances could not be accurately quantified. Additional distance and torsional restraints were derived from the proton-driven spin diffusion measurements and from the chemical shift analysis, respectively. Using all these restraints, it was possible to refine the structure of GB1 to a root-mean square deviation of 0.8 A. The approach is of general applicability for peptides and small proteins and can be easily incorporated into a structure determination and refinement protocol.     

Identification of the Large-Conductance Ca2+-Regulated Potassium Channel in Mitochondria of Human Bronchial Epithelial Cells

Mitochondria play a key role in energy metabolism within the cell. Potassium channels such as ATP-sensitive, voltage-gated or large-conductance Ca²⁺-regulated channels have been described in the inner mitochondrial membrane. Several hypotheses have been proposed to describe the important roles of mitochondrial potassium channels in cell survival and death pathways. In the current study, we identified two populations of mitochondrial large-conductance Ca²⁺-regulated potassium (mitoBK_Ca) channels in human bronchial epithelial (HBE) cells. The biophysical properties of the channels were characterized using the patch-clamp technique. We observed the activity of the channel with a mean conductance close to 285 pS in symmetric 150/150 mM KCl solution. Channel activity was increased upon application of the potassium channel opener NS11021 in the micromolar concentration range. The channel activity was completely inhibited by 1 µM paxilline and 300 nM iberiotoxin, selective inhibitors of the BK_Ca channels. Based on calcium and iberiotoxin modulation, we suggest that the C-terminus of the protein is localized to the mitochondrial matrix. Additionally, using RT-PCR, we confirmed the presence of α pore-forming (Slo1) and auxiliary β3-β4 subunits of BK_Ca channel in HBE cells. Western blot analysis of cellular fractions confirmed the mitochondrial localization of α pore-forming and predominately β3 subunits. Additionally, the regulation of oxygen consumption and membrane potential of human bronchial epithelial mitochondria in the presence of the potassium channel opener NS11021 and inhibitor paxilline were also studied. In summary, for the first time, the electrophysiological and functional properties of the mitoBK_Ca channel in a bronchial epithelial cell line were described.     

Photochemical and electrochemical Z–E isomerization of 1,4-dialkoxy-2,5-bis[2-(thien-2-yl)ethenyl]benzene stereoisomers

The group of 1,4-dialkoxy-2,5-bis[2-(thien-2-yl)ethenyl]benzene stereoisomers was synthesized in which methoxy- and ethoxy-groups were used as alkoxy-substituents. These isomers were characterized as solution species both electrochemically and spectroscopically. As expected, these compounds, having a stilben like structure, are the subject of photoisomerization, which is described and discussed. It is demonstrated how electrochemical process may cause isomerization of the double CC bonds in that group of compounds. An attempt of using electrochemical methods to monitor the process of photoisomerization of these compounds is presented. Mechanism of the oxidatively induced electrochemical isomerization has been proposed and discussed. The electrochemical isomerization mechanism is verified by digital simulation, which allowed estimating basic kinetic parameters of the processes.     

Controlled Assembly of Block Copolymer Coated Nanoparticles in 2D Arrays

The defined assembly of nanoparticles (NPs) in polymer matrices is an important prerequisite for next‐generation functional materials. A promising approach to control NP positions in polymer matrices at the nanometer scale is the use of block copolymers. It allows the selective deposition of NPs in nanodomains, but the final defined and ordered positioning of the NPs within the domains has not been possible. This can now be achieved by coating NPs with block copolymers. The self‐assembly of block copolymer‐coated NPs directly leads to ordered microdomains containing ordered NP arrays with exactly one NP per unit cell. By variation of the grafting density, the inter‐nanoparticle distance can be controlled from direct NP surface contact to surface separations of several nanometers, determined by the thickness of the polymer shell. The method can be applied to a wide variety of block copolymers and NPs and is thus suitable for a broad range of applications.     

Morphological,Structural, and Compositional Evolution of Pt–Ni Octahedral Electrocatalysts with Pt‐Rich Edges and Ni‐Rich Core: Toward the Rational Design of Electrocatalysts for the Oxygen Reduction Reaction

The progress in colloidal synthesis of Pt–Ni octahedra has been instrumental in rising the oxygen reduction reaction catalytic activity high above the benchmark of Pt catalysts. This impressive catalytic performance is believed to result from the exposure of the most active catalytic sites after an activation process, chemical or electrochemical, which leads to a Pt surface enrichment. A foremost importance is to understand the structure and the elemental distribution of Pt–Ni octahedral, which leads to an optimal catalytic activity and stability. However, the factors governing the synthesis of the Pt–Ni octahedra are not well understood. In this study, unprecedented surface atomic segregation of Pt atoms in a Ni‐rich Pt–Ni octahedral nanoparticle structure is established by advanced electron microscopy. The Pt atoms are almost exclusively located on the edges of the Pt–Ni octahedra. This structure is formed in a pristine form, i.e., prior to any chemical or electrochemical etching. A new growth mechanism is revealed, which involves the transformation from an octahedron with a Pt‐rich core to a Ni‐rich octahedron with Pt‐rich edges. This observation may pave the way for a deeper understanding of this class of Pt–Ni octahedral nanoparticles as an electrocatalyst.     

On-Surface Synthesis and Determination of the Open-Shell Singlet Ground State of Tridecacene**

The character of the electronic structure of acenes has been the subject of longstanding discussion. However, convincing experimental evidence of their open-shell character has so far been missing. Here, we present the on-surface synthesis of tridecacene molecules by thermal annealing of octahydrotridecacene on a Au(111) surface. We characterized the electronic structure of the tridecacene by scanning probe microscopy, which reveals the presence of an inelastic signal at 126 meV. We attribute the inelastic signal to spin excitation from the singlet diradical ground state to the triplet excited state. To rationalize the experimental findings, we carried out many-body ab initio calculations as well as model Hamiltonians to take into account the effect of the metallic substrate. Moreover, we provide a detailed analysis of how the dynamic electron correlation and virtual charge fluctuation between the molecule and metallic surface reduces the singlet-triplet band gap. Thus, this work provides the first experimental confirmation of the magnetic character of tridecacene.     

Changes in Porous Parameters of the Ion Exchanged X Zeolite and Their Effect on CO2 Adsorption

Zeolite 13X (NaX) was modified through ion-exchange with alkali and alkaline earth metal cations. The degree of ion exchange was thoroughly characterized with ICP, EDS and XRF methods. The new method of EDS data evaluation for zeolites was presented. It delivers the same reliable results as more complicated, expensive, time consuming and hazardous ICP approach. The highest adsorption capacities at 273 K and 0.95 bar were achieved for materials containing the alkali metals in the following order K < Na < Li, respectively, 4.54, 5.55 and 5.94 mmol/g. It was found that it is associated with the porous parameters of the ion-exchanged samples. The Li_0.61Na_0.39X form of zeolite exhibited the highest specific surface area of 624 m²/g and micropore volume of 0.35 cm³/g compared to sodium form 569 m²/g and 0.30 cm³/g, respectively. The increase of CO₂ uptake is not related with deterioration of CO₂ selectivity. At room temperature, the CO₂ vs. N₂ selectivity remains at a very high stable level prior and after ion exchange in co-adsorption process (X_CO2 during adsorption 0.15; X_CO2 during desorption 0.95) within measurement uncertainty. Additionally, the Li_0.61Na_0.39X sample was proven to be stable in the aging adsorption-desorption tests (200 sorption-desorption cycles; circa 11 days of continuous process) exhibiting the CO₂ uptake decrease of about 6%. The exchange with alkaline earth metals (Mg, Ca) led to a significant decrease of SSA and micropore volume which correlated with lower CO₂ adsorption capacities. Interestingly, the divalent cations cause formation of mesopores, due to the relaxation of lattice strains.     

Glucosylation of (±)-Menthol by Uridine-Diphosphate-Sugar Dependent Glucosyltransferases from Plants

Menthol is a cyclic monoterpene alcohol of the essential oils of plants of the genus Mentha, which is in demand by various industries due to its diverse sensorial and physiological properties. However, its poor water solubility and its toxic effect limit possible applications. Glycosylation offers a solution as the binding of a sugar residue to small molecules increases their water solubility and stability, renders aroma components odorless and modifies bioactivity. In order to identify plant enzymes that catalyze this reaction, a glycosyltransferase library containing 57 uridine diphosphate sugar-dependent enzymes (UGTs) was screened with (±)-menthol. The identity of the products was confirmed by mass spectrometry and nuclear magnetic resonance spectroscopy. Five enzymes were able to form (±)-menthyl-β-d-glucopyranoside in whole-cell biotransformations: UGT93Y1, UGT93Y2, UGT85K11, UGT72B27 and UGT73B24. In vitro enzyme activity assays revealed highest catalytic activity for UGT93Y1 (7.6 nkat/mg) from Camellia sinensis towards menthol and its isomeric forms. Although UGT93Y2 shares 70% sequence identity with UGT93Y1, it was less efficient. Of the five enzymes, UGT93Y1 stood out because of its high in vivo and in vitro biotransformation rate. The identification of novel menthol glycosyltransferases from the tea plant opens new perspectives for the biotechnological production of menthyl glucoside.