High-resolution four-dimensional 1H-13C NOE spectroscopy using methyl-TROSY, sparse data acquisition, and multidimensional decomposition

An approach for recording four-dimensional (4D) methyl (1)H-(13)C-(13)C-(1)H NOESY spectra with high resolution and sensitivity is presented and applied to Malate Synthase G (723 residues, 82 kDa). Sensitivity and resolution have been optimized using a highly deuterated, methyl-protonated sample in concert with methyl-TROSY, sparse data sampling in the three indirect dimensions, and 4D spectral reconstruction using multidimensional decomposition (MDD). A sparse data acquisition protocol is introduced that ensures that sufficiently long indirect acquisition times can be employed to exploit the decreased relaxation rates associated with methyl-TROSY, without increasing the duration of the 4D experiment beyond acceptable measurement times. In this manner, only a fraction ( approximately 30%) of the experimental data that would normally be needed to achieve a spectrum of high resolution is acquired. The reconstructed 4D spectrum is of similar resolution and sensitivity to three-dimensional (3D) (13)C-edited NOE spectra, is straightforward to analyze, and resolves ambiguities that emerge when 3D data sets only are considered.     

Functionalization of the 4(5)methyl group of imidazoles: A novel synthesis of substituted imidazoles

Acyl vinyl phosphonium salts react with amidines to form imidazolyl phosphonium salts. These imidazolyl salts can be readily converted to multifunctional imidazoles with quantitative recovery of triphenyl phosphine.     

Low temperature spectroscopic observation of oxygen-protonated troponeiron tricarbonyl complexes

Troponeiron tricarbonyl and 7-methyltroponeiron tricarbonyl undergo kinetically controlled oxygen protonation at low temperatures to give the corresponding hydroxytropyliumiron tricarbonyl cations, observable by ¹C and ¹H NMR spectroscopy. At higher temperatures, the oxygen-protonated species isomerize to yield the thermodynamically more stable carbon-protonated pentadienyliron tricarbonyl cations.     

Snapshots of dioxygen activation by copper: the structure of a 1:1 Cu/O(2) adduct and its use in syntheses of asymmetric Bis(mu-oxo) complexes

The X-ray structure of a 1:1 Cu/O(2) adduct revealed side-on (eta(2)) O(2) coordination. Density functional calculations corroborated the structure, indicated a significant contribution of a Cu(III)-(O(2)(2-)) resonance form, and provided insights into the key bonding interactions. Reaction of a 1:1 adduct supported by a slightly different beta-diketiminate ligand with Cu(I) reagents resulted in the formation of novel asymmetric bis(mu-oxo) complexes that were identified by EPR, UV-vis, and Raman spectroscopy, as well as by an X-ray structure in one instance.     

Reversible formation of DNA G-quadruplex hairpin dimers from stilbenediether conjugates

Rapid and reversible G-quadruplex hairpin dimer formation is observed for bis(oligonucleotide) conjugates possessing stilbenediether (Sd) linkers connecting two short poly(G) sequences.     

Mass spectra of C-nucleosides II. An unusual fragmentation reaction of the heterocyclic moiety of pyrazomycin and some closely related compounds

The mass spectrum of pyrazomycin has been obtained and reveals a fragmentation pattern with several important peaks which are not normally found in the mass spectra of C-nucleosides. It has now been established, using model compounds, that these unusual fragment ions are a direct result of the juxtaposition of the exocyclic hydroxy and carboxamido groups of the aglycon. It appears that a facile elimination of ammonia and ethanol from o-hydroxycarboxamides and o-hydroxyethylesters, respectively, may be a general fragmentation reaction for aromatic heterocycles. A mass spectrum of the TMS derivative of pyrazomycin has also been obtained and factors which may result in exceptions to the empirical B+30 (M-103) rule for C-nucleosides are discussed.     

The calculation of molar polarizabilities by the CNDO/2 method: Correlation with the hydrophobic parameter,log P

Results of molecular orbital (MO) calculations by the complete neglect of differential overlap (CNDO /2) method on 50 small molecules are reported. The summation of calculated atomic polarizabilities are equated with molecular polarizabilities, and these are compared with experimentally determined values. It is found that there is very good agreement between calculated and experimental molecular polarizability. This provides a reliable method for the determination of molecular polarizabilities for compounds for which experimental values are not known. The relationship between log P and polarizability is discussed and analyzed in terms of contributions from electronic components to the partitioning energy.     

Molecular orbital calculations on tumor-inhibitory nitrosoureas: QSARs

Molecular Orbital (MO) calculations by the MINDO/3 method on tumor-inhinbitory nitrosoureas is reported. Electronic structures for 18 chlorethyl nitrosoureas and 30 cyclohexyl nitrosoureas (CCNUS ) are related to biological activity in the form of toxicity, therapeutic activity, and increase in life span and chemical reactivity in the form of alkylating and carbamoylating activity. Hydrophobicity, as measured by the logarithm of the partition coefficient (octan-1-o1/water), shows a parallelism with calculated bulk molecular properties. Mechanisms of alkylation and other reactions related to biological action are proposed and discussed.     

Aquachlorobis[4,4,5,5‐tetramethyl‐2‐(2‐pyridyl)‐4,5‐dihydro‐1H‐imidazol‐1‐oxyl 3‐oxide‐κ2O1,N2]nickel(II) nitrate methanol disolvate monohydrate

The title complex, [NiCl(C₁₂H₁₆N₃O₂)₂(H₂O)]NO₃·2CH₄O·H₂O, was obtained from a methano­lic solution of Ni(NO₃)₂·6H₂O, 2‐pyridyl nitro­nyl nitro­xide (2‐NITpy) and (NEt₄)₂[CoCl₄]. The equatorial coordination sites of the octahedral Ni^II centre are occupied by two chelating radical ligands, with the axial positions occupied by the Cl^? and water ligands. The H₂O—Ni—Cl axis of the complex lies along a crystallographic twofold axis, so that only half the cation is present in the asymmetric unit. The Ni—Cl bond length [2.3614 (17) Å] is significantly shorter than distances typical of octahedral Ni^II centres [2.441 (5) Å]. However, with only one nitrate anion per formula unit, the oxidation state of the metal must be assigned as Ni^II. The 2‐NITpy ligands bend away from the equatorial plane, forming a hydro­phobic region around the Cl atoms. Conversely, the ligated water mol­ecule forms moderately strong hydrogen bonds with the disordered methanol solvent mol­ecules, which in turn form interactions with the water of crystallization and the disordered nitrate anion. These interactions combine to give hydro­philic regions throughout the crystal structure.