Envisaging quantum transport phenomenon in a muddled base pair of DNA

The effect of muddled base pair on electron transfer through a deoxyribonucleic acid (DNA) molecule connected to the gold electrodes has been elucidated using tight binding model. The effect of hydrogen and nitrogen bonds on the resistance of the base pair has been minutely observed. Using the semiempirical extended Huckel approach within NEGF regime, we have determined the current and conductance vs. bias voltage for disordered base pairs of DNA made of thymine (T) and adenine (A). The asymmetrical behaviour amid five times depreciation in the current characteristics has been observed for deviated Au–AT base pair–Au devices. An interesting revelation is that the conductance of the intrinsic AT base pair configuration attains dramatically high values with the symmetrical zig-zag pattern of current, which clearly indicates the transformation of the bond length within the strands of base pair when compared with other samples. A thorough investigation of the transmission coefficients T(E) and HOMO–LUMO gap reveals the misalignment of the strands in base pairs of DNA. The observed results present an insight to extend this work to build biosensing devices to predict the abnormality with the DNA.     

Non-imaging ray-tracing for sputtering simulation with apodization

Although apodization patterns have been adopted for the analysis of sputtering sources, the analytical solutions for the film thickness equations are yet limited to only simple conditions. Empirical formulations for thin film sputtering lacking the flexibility in dealing with multi-substrate conditions, a suitable cost-effective procedure is required to estimate the film thickness distribution. This study reports a cross-discipline simulation program, which is based on discrete particle Monte-Carlo methods and has been successfully applied to a non-imaging design to solve problems associated with sputtering uniformity. Robustness of the present method is first proved by comparing it with a typical analytical solution. Further, this report also investigates the overall all effects cause by the sizes of the deposited substrate, such that the determination of the distance between the target surface and the apodization index can be complete. This verifies the capability of the proposed method for solving the sputtering film thickness problems. The benefit is that an optical thin film engineer can, using the same optical software, design a specific optical component and consider the possible coating qualities with thickness tolerance, during the design stage.     

Comparison of external electric and magnetic fields effect on binding energy of hydrogenic donor impurity in different shaped quantum wells

The effects of external electric and magnetic fields on the ground state binding energy of hydrogenic donor impurity are compared in square, V-shaped, and parabolic quantum wells. With the effective-mass envelope-function approximation theory, the ground state binding energies of hydrogenic donor impurity in InGaAsP/InP QWs are calculated through the plane wave basis method. The results indicate that as the quantum well width increases, the binding energy changes most fast in SQW. When the well width is fixed, the binding energy is the largest in VQW for the donor impurity located near the center of QWs. For the smaller and larger well width, the electric field effect on binding energy is the most significant in VQW and SQW, respectively. The magnetic field effect on binding energy is the most significant in VQW. The combined effects of electric and magnetic fields on the binding energy of hydrogenic donor impurity are qualitative consistent in different shaped QWs.     

Tunneling conductance oscillations in spin–orbit coupled metal–insulator–superconductor junctions

The tunneling conductance for a device consisting of a metal–insulator–superconductor (MIS) junction is studied in presence of Rashba spin–orbit coupling (RSOC) via an extended Blonder–Tinkham–Klapwijk formalism. We find that the tunneling conductance as a function of an effective barrier potential that defines the insulating layer and lies intermediate to the metallic and superconducting electrodes, displays an oscillatory behavior. The tunneling conductance shows high sensitivity to the RSOC for certain ranges of this potential, while it is insensitive to the RSOC for others. Additionally, when the period of oscillations is an odd multiple of a certain value of the effective potential, the conductance spectrum as a function of the biasing energy demonstrates a contrasting trend with RSOC, compared to when it is not an odd multiple. The explanations for the observation can be found in terms of a competition between the normal and Andreev reflections. Similar oscillatory behavior of the conductance spectrum is also seen for other superconducting pairing symmetries, thereby emphasizing that the insulating layer plays a decisive role in the conductance oscillations of a MIS junction. For a tunable Rashba coupling, the current flowing through the junction can be controlled with precision.     

Inhomogeneous Heisenberg spin chain and quantum vortex filament as non-holonomically deformed NLS systems

Through the Hasimoto map, various dynamical systems can be mapped to different integrodifferential generalizations of Nonlinear Schrödinger (NLS) family of equations some of which are known to be integrable. Two such continuum limits, corresponding to the inhomogeneous XXX Heisenberg spin chain [J. Phys. C 15, L1305 (1982)] and that of a thin vortex filament moving in a superfluid with drag [Eur. Phys. J. B 86, 275 (2013) 86; Phys. Rev. E 91, 053201 (2015)], are shown to be particular non-holonomic deformations (NHDs) of the standard NLS system involving generalized parameterizations. Crucially, such NHDs of the NLS system are restricted to specific spectral orders that exactly complements NHDs of the original physical systems. The specific non-holonomic constraints associated with these integrodifferential generalizations additionally posses distinct semi-classical signature.     

Thermoelectric efficiency enhanced in a quantum dot with polarization leads,spin-flip and external magnetic field

We theoretically study the thermoelectric transport properties in a quantum dot system with two ferromagnetic leads, the spin-flip scattering and the external magnetic field. The results show that the spin polarization of the leads strongly influences thermoelectric coefficients of the device. For the parallel configuration the peak of figure of merit increases with the increase of polarization strength and non-collinear configuration trends to destroy the improvement of figure of merit induced by lead polarization. While the modulation of the spin-flip scattering on the figure of merit is effective only in the absence of external magnetic field or small magnetic field. In terms of improving the thermoelectric efficiency, the external magnetic field plays a more important role than spin-flip scattering. The thermoelectric efficiency can be significantly enhanced by the magnetic field for a given spin-flip scattering strength.     

Interaction of longitudinal phonons with discrete breather in strained graphene

We numerically analyze the interaction of small-amplitude phonon waves with standing gap discrete breather (DB) in strained graphene. To make the system support gap DB, strain is applied to create a gap in the phonon spectrum. We only focus on the in-plane phonons and DB, so the issue is investigated under a quasi-one-dimensional setup. It is found that, for the longitudinal sound waves having frequencies below 6 THz, DB is transparent and thus no radiation of energy from DB takes place; whereas for those sound waves with higher frequencies within the acoustic (optical) phonon band, phonon is mainly transmitted (reflected) by DB, and concomitantly, DB radiates its energy when interacting with phonons. The latter case is supported by the fact that, the sum of the transmitted and reflected phonon energy densities is noticeably higher than that of the incident wave. Our results here may provide insight into energy transport in graphene when the spatially localized nonlinear vibration modes are presented.     

Holography of massive M2-brane theory: non-linear extension

We investigate the gauge/gravity duality between the \(\mathcal{N} = 6\) mass-deformed ABJM theory with \(\hbox {U}_k(N)\times \hbox {U}_{-k}(N)\) gauge symmetry and the 11-dimensional supergravity on LLM geometries with SO(2,1)\(\times \)SO(4)/\({\mathbb {Z}}_k\) \(\times \)SO(4)/\({\mathbb {Z}}_k\) isometry, in terms of a KK holography, which involves quadratic order field redefinitions. We establish the quadratic order KK mappings for various gauge invariant fields in order to obtain the canonical 4-dimensional gravity equations of motion and to reduce the LLM solutions to an asymptotically AdS\(_4\) gravity solutions. The non-linearity of the KK maps indicates that we can observe the true purpose of the non-linear KK holography of the LLM solutions. We read the vacuum expectation value of conformal dimension two operator from the asymptotically AdS\(_4\) gravity solutions. For the LLM solutions which are represented by square-shaped Young diagrams, we compare the vacuum expectation value obtained from the holographic procedure with the result obtained from the field theory, which is given by \(\langle \mathcal{O}^{(\Delta =2)}\rangle =\sqrt{k}N^{\frac{3}{2}}f_{(\Delta =2)}+\mathcal{O}(N)\), where \(f_{\Delta }\) is independent of N. Based on this result, we examine the gauge/gravity duality in the large N limit and finite k. We also show that the vacuum expectation values of the massive KK graviton modes are vanishing as expected by the supersymmetry.     

Stop coannihilation in the CMSSM and SubGUT models

Stop coannihilation may bring the relic density of heavy supersymmetric dark matter particles into the range allowed by cosmology. The efficiency of this process is enhanced by stop-antistop annihilations into the longitudinal (Goldstone) modes of the W and Z bosons, as well as by Sommerfeld enhancement of stop annihilations and the effects of bound states. Since the couplings of the stops to the Goldstone modes are proportional to the trilinear soft supersymmetry-breaking A-terms, these annihilations are enhanced when the A-terms are large. However, the Higgs mass may be reduced below the measured value if the A-terms are too large. Unfortunately, the interpretation of this constraint on the stop coannihilation strip is clouded by differences between the available Higgs mass calculators. For our study, we use as our default calculator FeynHiggs 2.13.0, the most recent publicly available version of this code. Exploring the CMSSM parameter space, we find that along the stop coannihilation strip the masses of the stops are severely split by the large A-terms. This suppresses the Higgs mass drastically for \(\mu \) and \(A_0 > 0\), whilst the extent of the stop coannihilation strip is limited for \(A_0 < 0\) and either sign of \(\mu \). However, in sub-GUT models, reduced renormalization-group running mitigates the effect of the large A-terms, allowing larger LSP masses to be consistent with the Higgs mass calculation. We give examples where the dark matter particle mass may reach \(\gtrsim 8\) TeV.     

Majorana flipping of quarkonium spin states in transient magnetic field

We demonstrate that spin flipping transitions occur between various quarkonium spin states due to transient magnetic field produced in non central heavy ion collisions (HICs). The inhomogeneous nature of the magnetic field results in non adiabatic evolution of (spin)states of quarkonia moving inside the transient magnetic environment. Our calculations explicitly show that the consideration of azimuthal inhomogeneity gives rise to dynamical mixing between different spin states owing to Majorana spin flipping. Notably, this effect of non-adiabaticity is novel and distinct from previously predicted mixing of the singlet and one of the triplet states of quarkonia in the presence of a static and homogeneous magnetic field.