A quantum chemical study of reactions of DNA bases with sulphur mustard: a chemical warfare agent

Reactions of the sulphonium ion of sulphur mustard (SM⁺¹) at the N7, N3 and O6 sites of guanine, N7, N3 and N1 sites of adenine, O2 and N3 sites of cytosine and O2 and O4 sites of thymine were studied theoretically in gas phase and aqueous media employing density functional theory (DFT) and second order Møller–Plesset perturbation (MP2) theory. The B3LYP, B3PW91 and B1B95 functionals of DFT and the 6-31+G* and AUG-cc-pVDZ basis sets were used in the calculations. Basis set superposition error was treated using the counterpoise method by single point energy calculations at the B3LYP/6-31+G* level in gas phase. The present study explains the mechanism of alkylation of the DNA bases and shows that SM⁺¹ would form stable adducts at the endocyclic nitrogen sites of the DNA bases, and at the O6 site of guanine and the O2 site of cytosine. Formation of adducts at the N7 site of guanine and N3 site of adenine are found to be most favored and next most favored respectively, which agrees with experimental observations.     

Sulfated nanozirconia: an investigation on acid-base properties and n-butane isomerization activity

Hydrated zirconia was synthesized by an organo-inorganic route employing surfactant and was sulfated using aqueous ammonium persulfate, followed by drying at 110 degrees C. The sample thus obtained was calcined at 600 degrees C to obtain sulfated zirconia and was characterized by several physicochemical methods. Crystallite sizes of sulfated zirconia were calculated from X-ray line broadening using the Debye-Scherer equation and were found to be in the range of 25 nm. When pretreated in air, the catalyst was found to exhibit butane isomerization activity at a temperature as low as 35 degrees C under atmospheric pressure. It showed conversion as high as 37% at 100 degrees C under normal pressure when pretreated in air, whereas nitrogen-pretreated catalyst showed zero activity under similar conditions. NH(3) and CO(2) temperature-programmed desorption studies on air- and helium-pretreated samples indicated that the catalyst surface changes appreciably during air pretreatment. Results on butane isomerization in conjunction with TPD studies suggest that zirconium-oxy sites play an important role in butane activation during the reaction.     

Chemical modification of silica surface by immobilization of functional groups for extractive concentration of metal ions

Increased utilization of mechanically stable synthetic matrices particularly silica gel as a solid support and its surface modification either by impregnation of organic ligands directly or covalent grafting through spacer unit for extractive concentration of trace elements are highlighted in the present article. Experimental evidences for existence of surface silanol and its chemical nature have explored the idea of silica surface modification. Recent methods of development in functionalized silica synthesis by attachment of various ligands or organic reagents to the silica surface and techniques of characterization of the modified surface have been reported. Analytical applications of various modified silica surfaces, in particular, adsorption of trace elements taking separation and preconcentration into account from complex synthetic mixture as well as natural water is presented.     

Diacetoxyiodobenzene mediated one-pot synthesis of diverse carboxamides from aldehydes

A novel, one-pot, and highly facile protocol has been devised for an easy access of a series of novel glycosyl carboxamides from aldehydes using diacetoxyiodobenzene in the presence of ionic liquid at ambient temperature.     

Synthetic Studies Toward the Preparation of Phosphonate Analogs of Sphingomyelins and Ceramide 1 -Phosphate Using Pentacovalent Organophosphorus Methodology

Abstract

Non-isosteric phosphonate analogs of sphingomyelin and ceramide 1-phosphate are being synthesized from the condensation product of a pentacovalent oxaphospholene and azodicarboxylates. Model studies are initially described.     

In silico mutagenesis and docking study of Ralstonia solanacearum RSL lectin: performance of docking software to predict saccharide binding

In this study, in silico mutagenesis and docking in Ralstonia solanacearum lectin (RSL) were carried out, and the ability of several docking software programs to calculate binding affinity was evaluated. In silico mutation of six amino acid residues (Agr17, Glu28, Gly39, Ala40, Trp76, and Trp81) was done, and a total of 114 in silico mutants of RSL were docked with Me-α-L-fucoside. Our results show that polar residues Arg17 and Glu28, as well as nonpolar amino acids Trp76 and Trp81, are crucial for binding. Gly39 may also influence ligand binding because any mutations at this position lead to a change in the binding pocket shape. The Ala40 residue was found to be the most interesting residue for mutagenesis and can affect the selectivity and/or affinity. In general, the docking software used performs better for high affinity binders and fails to place the binding affinities in the correct order.     

Grafting Vinyl Monomers onto Wool Fibers. VII. Graft Copolymerization of Methyl Methacrylate onto Wool Using Peroxydiphosphate-Thiourea Redox System

Graft copolymerization of methyl methacrylate onto wool was investigated in aqueous solution using the potassium peroxy-diphosphate-thiourea redox system as the initiator. The rate of grafting was determined by varying the monomer, peroxydi-phosphate ion, temperature, and solvent. The graft yield increases with increasing peroxydiphosphate ion up to 80 × 10^?-⁴ mol/L, and with further increase of peroxydiphosphate ion the graft yield decreases. The graft yield increases with increasing monomer concentration. The percentage of grafting decreases with increasing thiourea concentration. The rate of grafting increases with an increase of temperature. The effect of acid and water-soluble solvent and certain salts on graft yield has been investigated and a suitable rate expression has been derived.     

Kinetics of Polymerization of Methyl Methacrylate initiated by AIBN in the Presence of Acetophenone

The present investigation aims at estimating the retarding effect of acetophenone in the polymerization of methyl methacrylate initiated by α,α' -azobisisobutyronitrile in the temperature range of 50 to 80°C. The results are interpreted in terms of Tüdös kinetic parameter (β). The effects of varying concentrations of substrate, monomer, initiator, and salts have been investigated. A suitable reaction scheme and rate expression have been suggested on the basis of the experimental findings, and another kinetic parameter (K) to represent the reactivity of acetophenones toward the polymer radical has been obtained graphically.     

Living Carbocationic Polymerization. VII. Living Polymerization of Isobutylene by Tertiary Alkyl (or Aryl) Methyl Ether/Boron Trichloride Complexes

Abstract

Colloidal palladium supported on a chelate resin containing iminodiacetic acid groups was prepared by refluxing the palladium chelate resin in methanol-water. Using the resin-supported colloidal palladium as a catalyst, cyclopentadiene was hydrogenated to cyclopentene in 97.1% selectivity at 100% conversion of cyclopentadiene under 1 atm of hydrogen in methanol at 30°C. Finely dispersed metal particles ranging from 10 to 60 Å in diameter were observed in the resin by electron microscopy. Both x-ray microanalysis for palladium and elution analysis of palladium ion with an aqueous solution of ethylenediaminetetraacetic acid disodium salt demonstrated the existence of large amounts of palladium ion complexes in the resin. The amount of palladium metal in the resin was estimated to be about 5% of the total palladium. Since the resin, after removal of most of the ionic palladium, exhibited almost the same catalytic activity as before, it was concluded that the finely dispersed metal particles are the active species in the catalyst.     

The Synthesis of Poly(Dimethylsiloxane-b-Isobutylene-b-Dimethylsiloxane) and Poly-(Dimethylsiloxane-b-Isobutylene-b-Dimethylsiloxane) from Alcohol-Telechelic Polyisobutylenes

The purpose of these studies was to combine polydimethylsiloxane (PDMS) and polyisobutylene (PIB) sequences into novel triblock, PDMS-b-PIB-b-PDMS, and multiblock, (-PDMS-b-PIB-b-PDMS-)n, copolymers. The key toward syntheses was the definition of conditions for the initiation of living anionic polymerization of hexamethyl-cyclotrisiloxane (D₃) at the CH₂OLi termini of well-defined tele-chelic PIB sequences. Subsequent deactivation of living D₃ polymerization charges with Me₃ SiCl yielded the target triblock whereas stoichiometric amounts of Me₂ SiCl₂ gave the multiblock copolymer.