Total synthesis of (+)-spiroindimicin A and congeners unveils their antiparasitic activity

The spiroindimicins are a unique class of chlorinated indole alkaloids characterized by three heteroaromatic rings structured around a congested spirocyclic stereocenter. Here, we report the first total synthesis of (+)-spiroindimicin A, which bears a challenging C-3′/C-5′′-linked spiroindolenine. We detail our initial efforts to effect a biomimetic oxidative spirocyclization from its proposed natural precursor, lynamicin D, and describe how these studies shaped our final abiotic 9-step solution to this complex alkaloid built around a key Pd-catalyzed asymmetric spirocyclization. Scalable access to spiroindimicins A, H, and their congeners has enabled discovery of their activity against several parasites relevant to human health, providing potential starting points for new therapeutics for the neglected tropical diseases leishmaniasis and African sleeping sickness.

Spiroindimicins A and H have been synthesized for the first time via a key palladium-catalyzed spirocyclization. Access to these alkaloids and several congeners has allowed the discovery of their antiparasitic properties.     

Measuring binding of protein to gel-bound ligands using magnetic levitation

This paper describes the use of magnetic levitation (MagLev) to measure the association of proteins and ligands. The method starts with diamagnetic gel beads that are functionalized covalently with small molecules (putative ligands). Binding of protein to the ligands within the bead causes a change in the density of the bead. When these beads are suspended in a paramagnetic aqueous buffer and placed between the poles of two NbFeB magnets with like poles facing, the changes in the density of the bead on binding of protein result in changes in the levitation height of the bead that can be used to quantify the amount of protein bound. This paper uses a reaction-diffusion model to examine the physical principles that determine the values of rate and equilibrium constants measured by this system, using the well-defined model system of carbonic anhydrase and aryl sulfonamides. By tuning the experimental protocol, the method is capable of quantifying either the concentration of protein in a solution, or the binding affinities of a protein to several resin-bound small molecules simultaneously. Since this method requires no electricity and only a single piece of inexpensive equipment, it may find use in situations where portability and low cost are important, such as in bioanalysis in resource-limited settings, point-of-care diagnosis, veterinary medicine, and plant pathology. It still has several practical disadvantages. Most notably, the method requires relatively long assay times and cannot be applied to large proteins (>70 kDa), including antibodies. The design and synthesis of beads with improved characteristics (e.g., larger pore size) has the potential to resolve these problems.     

How and when does an unusual and efficient photoredox reaction of 2-(1-hydroxyethyl) 9,10-anthraquinone occur? A combined time-resolved spectroscopic and DFT study

The photophysics and photochemical reactions of 2-(1-hydroxyethyl) 9,10-anthroquinone (2-HEAQ) were studied using femtosecond transient absorption (fs-TA), nanosecond transient absorption (ns-TA), and nanosecond time-resolved resonance Raman (ns-TR(3)) spectroscopy techniques and density functional theory (DFT) calculations. In acetonitrile, 2-HEAQ underwent efficient intersystem crossing to the triplet excited state ((2-HEAQ)(3)). A typical photoreduction reaction for aromatic ketones took place via production of a ketyl radical intermediate for 2-HEAQ in isopropanol. In water-containing solutions with pH values between 2 and 10, an unusual photoredox reaction reported by Wan and co-workers was detected and characterized. Observation of the protonated species in neutral and acidic aqueous solutions by fs-TA spectra indicated the carbonyl oxygen of (2-HEAQ)(3) was protonated initially and acted as a precursor of the photoredox reaction. The preference of the photoredox reaction to occur under moderate acidic conditions compared to neutral condition observed using ns-TR(3) spectroscopy was consistent with results from DFT calculations, which suggested protonation of the carbonyl group was the rate-determining step. Under stronger acidic conditions (pH 0), although the protonated (2-HEAQ)(3) was formed, the predominant reaction was the photohydration reaction instead of the photoredox reaction. In stronger basic solutions (pH 12), (2-HEAQ)(3) decayed with no obvious photochemical reactions detected by time-resolved spectroscopic experiments. Reaction mechanisms and key reactive intermediates for the unusual photoredox reaction were elucidated from time-resolved spectroscopy and DFT results. A brief discussion is given of when photoredox reactions may likely take place in the photochemistry of aromatic carbonyl-containing compounds and possible implications for using BP and AQ scaffolds for phototrigger compounds.     

Inhibition of Specific Cellular Antioxidant Pathways Increases the Sensitivity of Neurons to Meta‐tetrahydroxyphenyl Chlorin‐Mediated Photodynamic Therapy in a 3D Co‐culture Model

The effect of photodynamic therapy (PDT) on neurons is of critical importance when treating cancers within or adjacent to the nervous system. Neurons show reduced sensitivity to meta‐tetrahydroxyphenyl chlorin (mTHPC) mediated PDT, so the aim of this study was to investigate whether neuron sparing is due to endogenous cellular antioxidant activity. Dorsal root ganglion (DRG) neurons and their associated satellite glia were subjected to mTHPC‐PDT in a 3D co‐culture system following incubation with antioxidant inhibitors: diethyl dithiocarbamate (DDC, SOD‐1 inhibitor), 2‐methoxyestradiol (2‐MeOH₂, SOD‐2 inhibitor) and l ‐buthionine sulfoximine (l ‐BSO, glutathione synthase inhibitor). Sensitivity of each cell type was assessed using a combination of live/dead staining and immunofluorescence. Pretreatment with DDC and with l ‐BSO significantly increased the sensitivity of neurons to mTHPC‐PDT and also affected satellite glial cell viability, whereas 2‐MeOE₂ caused only a small increase in neuron sensitivity (not significant). Pretreatment using a combination of DDC and l ‐BSO caused a near total loss of neuron and glial cell viability in treatment and control conditions. These findings suggest that the SOD‐1 and glutathione pathways are likely to be involved in the neuronal sparing associated with mTHPC‐PDT.     

Process Evaluation of Enzymatic Hydrolysis with Filtrate Recycle for the Production of High Concentration Sugars

Process simulation and lab trials were carried out to demonstrate and confirm the efficiency of the concept that recycling hydrolysate at low total solid enzymatic hydrolysis is one of the options to increase the sugar concentration without mixing problems. Higher sugar concentration can reduce the capital cost for fermentation and distillation because of smaller retention volume. Meanwhile, operation cost will also decrease for less operating volume and less energy required for distillation. With the computer simulation, time and efforts can be saved to achieve the steady state of recycling process, which is the scenario for industrial production. This paper, to the best of our knowledge, is the first paper discussing steady-state saccharification with recycling of the filtrate form enzymatic hydrolysis to increase sugar concentration. Recycled enzymes in the filtrate (15–30% of the original enzyme loading) resulted in 5–10% higher carbohydrate conversion compared to the case in which recycled enzymes were denatured. The recycled hydrolysate yielded 10% higher carbohydrate conversion compared to pure sugar simulated hydrolysate at the same enzyme loading, which indicated hydrolysis by-products could boost enzymatic hydrolysis. The high sugar concentration (pure sugar simulated) showed inhibition effect, since about 15% decrease in carbohydrate conversion was observed compared with the case with no sugar added. The overall effect of hydrolysate recycling at WinGEMS simulated steady-state conditions with 5% total solids was increasing the sugar concentration from 35 to 141 g/l, while the carbohydrate conversion was 2% higher for recycling at steady state (87%) compared with no recycling strategy (85%). Ten percent and 15% total solid processes were also evaluated in this study.     

Unraveling the Mechanism of the Photodeprotection Reaction of 8‐Bromo‐ and 8‐Chloro‐7‐hydroxyquinoline Caged Acetates

Photoremovable protecting groups (PPGs) when conjugated to biological effectors forming “caged compounds” are a powerful means to regulate the action of physiologically active messengers in vivo through 1‐photon excitation (1PE) and 2‐photon excitation (2PE). Understanding the photodeprotection mechanism is important for their physiological use. We compared the quantum efficiencies and product outcomes in different solvent and pH conditions for the photolysis reactions of (8‐chloro‐7‐hydroxyquinolin‐2‐yl)methyl acetate (CHQ‐OAc) and (8‐bromo‐7‐hydroxyquinolin‐2‐yl)methyl acetate (BHQ‐OAc), representatives of the quinoline class of phototriggers for biological use, and conducted nanosecond time‐resolved spectroscopic studies using transient emission (ns‐EM), transient absorption (ns‐TA), transient resonance Raman (ns‐TR²), and time‐resolved resonance Raman (ns‐TR³) spectroscopies. The results indicate differences in the photochemical mechanisms and product outcomes, and reveal that the triplet excited state is most likely on the pathway to the product and that dehalogenation competes with release of acetate from BHQ‐OAc, but not CHQ‐OAc. A high fluorescence quantum yield and a more efficient excited‐state proton transfer (ESPT) in CHQ‐OAc compared to BHQ‐OAc explain the lower quantum efficiency of CHQ‐OAc relative to BHQ‐OAc.     

A Total Synthesis of Norhalichondrin B

Four corners : The syntheses of four key building blocks for the total synthesis of norhalichondrin B (see structure) are described. The assembly of these subunits into the natural product is also reported. Key features of the synthesis are the use of the Achmatowicz oxidation/ionic hydrogenation for the synthesis of pyrans and pyranopyrans, and the application of tandem metathesis for the synthesis of pyranopyrans.

     

Concerted and stepwise proton-coupled electron transfers in aquo/hydroxo complex couples in water: oxidative electrochemistry of [Os(II)(bpy)(2)(py)(OH(2))](2+)

Successive oxidation of transition metal(II) aqua complexes (M(II)OH(2) to M(III)OH) is a domain in which proton-coupled electron transfer reactions are extremely common. The mechanism of these PCET reactions-concerted or stepwise-is an important issue in the understanding and design of natural or artificial systems catalyzing the formation of dioxygen by four-electron oxidation of water. Concerted proton-coupled electron transfer from an aqua metal(II) to a hydroxo metal(III) complex requires the close proximity of a proton-accepting group with a pK value between those of the aqua complexes. Otherwise, stepwise electron-proton or proton-electron pathways involving high-energy intermediates are followed. Concerted proton-electron pathways involving water as proton-acceptor or proton-donor group are inefficient. Cyclic voltammetry of the title complex in buffered aqueous solution and re-examination of previous results for the same complex attached to an electrode surface are used to establish these conclusions, which provide a starting point on the route to higher degrees of oxidation, such as those involved in the catalysis of water oxidation.