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Nucleobase and ribose modifications control immunostimulation by a microRNA-122-mimetic RNA

Immune stimulation is a significant hurdle in the development of effective and safe RNA interference therapeutics. Here, we address this problem in the context of a mimic of microRNA-122 by employing novel nucleobase and known 2'-ribose modifications. The nucleobase modifications are analogues of adenosine and guanosine that contain cyclopentyl and propyl minor-groove projections. Via a site-by-site chemical modification analysis, we identify several immunostimulatory 'hot spots' within the miRNA guide strand at which single base modifications significantly reduce immune stimulation. A duplex containing one base modification on each strand proved to be most effective in preventing immune stimulation.     

A modular ditopic crown-shielded phosphate ion-pair receptor

The synthesis of a modular hybrid receptor containing both an aza macrocycle and crown ether is described; a complete thermodynamic characterisation of the binding properties, in water, of the zinc(II) complex of the receptor towards phosphate is presented and the parameters are compared to those of the aza macrocycle precursor.     

Bonding, energies, and band offsets of Si-ZrO2 and HfO2 gate oxide interfaces

New oxides with high dielectric constant are required for gate oxides. ZrO2 is a typical example with ionic bonding. We give the rules for bonding at interfaces between Si and ionic oxides, to satisfy valence requirements and give an insulating interface. Total energies and band offsets are calculated for various (100)Si:ZrO(2) and HfO2 interface structures. The oxygen-terminated interface is found to be favored for devices, because it has no gap states and has a band offset which is rather independent of interfacial bonding.     

The onset of turbulence in physiological pulsatile flow in a straight tube

 An empirical correlation for the onset of turbulence in physiological pulsatile flow is presented. We pumped three different test fluids of kinematic viscosity 0.008–0.035 cm²/s through four straight tubes 0.4–3.0 cm in diameter. A Scotch yoke mechanism provided an oscillatory sine wave flow component of known stroke volume and frequency. We adjusted the mean flow independently until we detected signal instabilities from hot film wall shear stress probes. The critical peak Reynolds number was found to correlate with the Womersley parameter and the Strouhal number as a power law function with a root-mean-square (rms) error of 15.2%. Experimental measurements of the laminar velocity profile are compared to theoretical predictions from Poiseuille’s law and Womersley’s solution. Received: 30 October 1995/Accepted: 7 April 1997     

Chloro half-sandwich osmium(II) complexes: influence of chelated N,N-ligands on hydrolysis, guanine binding, and cytotoxicity

Relatively little is known about the kinetics or the pharmacological potential of organometallic complexes of osmium compared to its lighter congeners, iron and ruthenium. We report the synthesis of seven new complexes, [(eta6-arene)Os(NN)Cl]+, containing different bidentate nitrogen (N,N) chelators, and a dichlorido complex, [(eta6-arene)Os(N)Cl2]. The X-ray crystal structures of seven complexes are reported: [(eta6-bip)Os(en)Cl]PF6 (1PF6), [(eta6-THA)Os(en)Cl]BF4 (2BF4), [(eta6-p-cym)Os(phen)Cl]PF6 (5PF6), [(eta6-bip)Os(dppz)Cl]PF6 (6PF6), [(eta6-bip)Os(azpy-NMe2)Cl]PF6 (7PF6), [(eta6-p-cym)Os(azpy-NMe2)Cl]PF6 (8PF6), and [(eta6-bip)Os(NCCH3-N)Cl2] (9), where THA = tetrahydroanthracene, en = ethylenediamine, p-cym = p-cymene, phen = phenanthroline, bip = biphenyl, dppz = [3,2-a: 2',3'-c]phenazine and azpy-NMe2 = 4-(2-pyridylazo)-N,N-dimethylaniline. The chelating ligand was found to play a crucial role in enhancing aqueous stability. The rates of hydrolysis at acidic pH* decreased when the primary amine N-donors (NN = en, t1/2 = 0.6 h at 318 K) are replaced with pi-accepting pyridine groups (e.g., NN = phen, t1/2 = 9.5 h at 318 K). The OsII complexes hydrolyze up to 100 times more slowly than their RuII analogues. The pK*a of the aqua adducts decreased with a similar trend (pK*a = 6.3 and 5.8 for en and phen adducts, respectively). [(eta6-bip)Os(en)Cl]PF6/BF4 (1PF6/BF4) and [(eta6-THA)Os(en)Cl]BF4 (2BF4) were cytotoxic toward both the human A549 lung and A2780 ovarian cancer cell lines, with IC50 values of 6-10 microM, comparable to the anticancer drug carboplatin. 1BF4 binds to both the N7 and phosphate of 5'-GMP (ratio of 2:1). The formation constant for the 9-ethylguanine (9EtG) adduct [(eta6-bip)M(en)(9EtG)]2+ was lower for OsII (log K = 3.13) than RuII (log K = 4.78), although the OsII adduct showed some kinetic stability. DNA intercalation of the dppz ligand in 6PF6 may play a role in its cytotoxicity. This work demonstrates that the nature of the chelating ligand can play a crucial role in tuning the chemical and biological properties of [(eta6-arene)Os(NN)Cl]+ complexes.     

Carbon(sp3)-nitrogen bond-forming reductive elimination from phosphine-ligated alkylpalladium(II) amide complexes: A DFT study

DFT methods were employed to investigate C(sp³)-N bond-formation via reductive elimination from alkylpalladium(II) amide complexes. The hemi-lability of an ortho-methoxy substituent is computed to have minimal impact on reductive elimination barriers. In general, for both anilide and phosphine substituents, their steric impact is more substantial than electronic/Hammett factors. β-Hydrogen elimination is competitive with reductive elimination while β-methyl elimination is much less favorable. For phosphine-ligated Pd(II) amide complexes, the solvent impact on reductive elimination free energy barriers is small, and overall the substituent effects on either the phosphine or anilide ligand are subtle.     

Lanthanide directed self-assembly synthesis and photophysical evaluation of chiral Eu(III) luminescent "half-helicates"

The reaction between the asymmetrical pyridyl ligands 3 (R) and 4 (S) and Eu(III) in CH(3)CN give rise to the formation of lanthanide luminescent 'half-helicates' in 1?:?3 (Ln:ligand) stoichiometry; the formation of which was observed by monitoring the changes in the ground and the excited state properties of the ligands, and in the time-resolved Eu-centred and the CPL emission.