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91.
Jean Guillon Jean-Michel Leger Cecilia Dapremont Lou Apollonia Denis Pascal Sonnet Stéphane Massip 《Supramolecular chemistry》2013,25(5):319-329
The synthesis of new 25,27-dialkyloxy-5,17-diarylcalix[4]arenes-crown-6 1a–f in 1,3-alternate conformation by Suzuki cross-coupling reaction is reported. Their conformation was determined using 1H, 13C, 2D NMR and ROESY analysis, and X-ray crystallography. Extraction experiments using a two-phase solvent method involving sodium, potassium or cesium picrate showed good extraction of the cesium cation. The X-ray crystal structures of 1,3-alternate 25,27-dipropoxy-5,17-diphenylcalix[4]arene-crown-6 ether 1a and its cesium picrate complex were established. Solid-state data were used to determine the complexation behavior of these new ligands. The efficiency of calixarenes 1a–f for cesium ion extraction could be ascribed to the rigidity and flatness linkages caused by the aryl groups at the lower rim of the aromatic moieties in the calixarene skeleton. In addition, the introduction of these aromatic moieties in positions 5 and 17 enhanced the solubility of the metal complexes in organic media. 相似文献
92.
Monique?SabatyEmail author Sandrine?Grosse Geraldine?Adryanczyk Séverine?Boiry Frédéric?Biaso Pascal?Arnoux David?Pignol 《BMC biochemistry》2013,14(1):28
Background
YedY, a molybdoenzyme belonging to the sulfite oxidase family, is found in most Gram-negative bacteria. It contains a twin-arginine signal sequence that is cleaved after its translocation into the periplasm. Despite a weak reductase activity with substrates such as dimethyl sulfoxide or trimethylamine N-oxide, its natural substrate and its role in the cell remain unknown. Although sequence conservation of the YedY family displays a strictly conserved hydrophobic C-terminal residue, all known studies on Escherichia coli YedY have been performed with an enzyme containing a 6 histidine-tag at the C-terminus which could hamper enzyme activity.Results
In this study, we demonstrate that the tag fused to the C-terminus of Rhodobacter sphaeroides YedY is detrimental to the enzyme’s reductase activity and results in an eight-fold decrease in catalytic efficiency. Nonetheless this C-terminal tag does not influence the properties of the molybdenum active site, as assayed by EPR spectroscopy. When a cleavable His-tag was fused to the N-terminus of the mature enzyme in the absence of the signal sequence, YedY was expressed and folded with its cofactor. However, when the signal sequence was added upstream of the N-ter tag, the amount of enzyme produced was approximately ten-fold higher.Conclusion
Our study thus underscores the risk of using a C-terminus tagged enzyme while studying YedY, and presents an alternative strategy to express signal sequence-containing enzymes with an N-terminal tag. It brings new insights into molybdoenzyme maturation in R. sphaeroides showing that for some enzymes, maturation can occur in the absence of the signal sequence but that its presence is required for high expression of active enzyme.93.
Arbia Khemiri Bertrand Naudin Xavier Franck Philippe Chan Tchi Song Thierry Jouenne Pascal Cosette 《Analytical and bioanalytical chemistry》2013,405(30):9835-9842
In prokaryote organisms, N-glycosylation of proteins is often correlated to cell–cell recognition and extracellular events. Those glycoproteins are potential targets for infection control. To date, many surface-glycosylated proteins from bacterial pathogens have been described. However, N-linked Pseudomonas surface-associated glycoproteins remain underexplored. We report a combined enrichment and labeling strategy to identify major glycoproteins on the outside of microorganisms. More precisely, bacteria were exposed to a mix of biotinylated lectins able to bind with glycoproteins. The latter were then recovered by avidin beads, digested with trypsin, and submitted to mass spectrometry. The targeted mixture of glycoproteins was additionally deglycosylated in the presence of H2 18O to incorporate 18O during PNGase F treatment and were also analyzed using mass spectrometry. This approach allowed us to identify a few tens of potential N-glycoproteins, among which flagellin FliC was the most abundant. To detect the possible sites of FliC modifications, a de novo sequencing step was also performed to discriminate between spontaneous deamidation and N-glycan loss. This approach led to the proposal of three potential N-glycosylated sites on the primary sequence of FliC: N26, N69, and N439, with two of these three asparagines belonging to an N-X-(S/T) consensus sequence. These observations suggest that flagellin FliC is a heterogeneous protein mixture containing both O- and N-glycoforms. Figure
Analytical scenario developed for bacterial glycoprotein enrichment. This strategy includes three main steps: (1) exposure of Pseudomonas aeruginosa cells to a mixture of biotinylated lectins [wheat germ agglutinin (WGA) and concanavalin A (ConA)]; (2) enrichment of N-glycoproteins by elution with avidin beads; and (3) mass spectrometry (MS) identification and characterization of intact and deglycosylated peptides before and after H2 18O PNGase F enzymatic treatment, respectively 相似文献
94.
A series of cyclophanes composed of two triarylelement caps linked by two-atom bridges has been synthesized. The bridgehead functional groups include phosphines in combination with amines, hydrosilanes, methylsilanes, and ethoxysilanes. Computational studies accurately predicted that when the bridgehead substituents are small (lone pairs or protons), an in,in bridgehead stereochemistry is strongly favored, but larger bridgehead substituents favor the formations of in,out stereoisomers. The X-ray structures, spectra, and reactivity of these compounds are discussed, as well as the resolution of one of the cyclophanes into pure enantiomers. 相似文献
95.
Pascal Munier Marie-Béatrice Giudicelli Dominique Picq et Daniel Anker 《Journal of carbohydrate chemistry》2013,32(8):1225-1230
Abstract L'hydrolyse acide des acétals et en particulier des osides fait intervenir un carbocation intermédiaire stabilisé par l'oxygène voisin; un substituant électroattracteur en α de l'atome d'oxygène ou de carbone d'un tel cation déstabilise cedernier et rend l'hydrolyse des acétals plus difficile. C'est ainsi que pour un 2-méthoxy-tétrahydropyrane, le remplacement en C-6 d'un groupement CH2OH par CO2Et1 provoque une diminution de la vitesse d'hydrolyse d'un facteur de 200. Il est également bien connu que les 2-désoxy glycosides sont hydrolysés bien plus rapidement que leurs analogues 2-hydroxylés. Le même résultat est obtenu avec un atome d'halogène; c'est ainsi que Horton et coll.2 en introduisant un atome d'iode en position 2′ d'analogues de la daunorubicine et de l'adriamycine ont pu augmenter leur efficacité in vivo. Compte tenu de la taille réduite de l'atome de fluor qui modifie peu l'encombrement de la molécule, plusieurs travaux ont été consacrés à l'introduction d'un fluor en position 2 d'osides pour ralentir leur vitesse d'hydrolyse in vivo. 3-5 Cette même démarche a conduit d'autres auteurs à synthétiser des 2,2-difluorosucres.6 On pouvait donc envisager de remplacer l'hydrogène en C-1 de certains sucres par un groupement trifluorométhyle pour obtenir ainsi une nouvelle classe d'osides, dont la liaison osidique serait très stabilisée, ce qui devrait accroître leur durée de vie in vivo; on sait en effet 7 que les acétals de trifluorométhylcétones sont très difficiles à hydrolyser. Nous avons récemment décrit8 l'obtention des composés 1 et 9 et, on pouvait envisager de substituer l'hydroxyle anomérique de tels 2-uloses par divers nucléophiles. Les substitution nucléophiles en α d'un groupe CF3 sont difficiles9,10 et font en général intervenir un carbocation du type CF3-C+R1-XR2 stabilisé par un hétéroatome X(O, S)11-15 ou par un phényle.9 Ce carbocation est formé dans quelques cas par voie électrochimique,14-15 mais, dans la plupart des travaux, il résulte soit de la rupture d'une liaison CR1-Y assistée par un acide de Lewis soit de la solvolyse de cette liaison.9 Pour éviter l'emploi d'un acide de Lewis incompatible avec des groupes protecteurs acido-sensibles, nous avons mésylé l'hydroxyle anomérique pour obtenir un meilleur groupe partant. Nous décrivons dans cette note les résultats préliminaires obtenus principalement par action de divers nucléophiles sur ces mésylates. 相似文献
96.
Prof. Dr. A. Stephen K. Hashmi Tobias Lauterbach Dipl.‐Chem. Pascal Nösel Dr. Mie Højer Vilhelmsen Dr. Matthias Rudolph Dr. Frank Rominger 《Chemistry (Weinheim an der Bergstrasse, Germany)》2013,19(3):1058-1065
A series of dinuclear gold σ,π‐propyne acetylide complexes were prepared and tested for their catalytic ability in dual gold catalysis that was based on the reaction of an electrophilic π‐complex of gold with a gold acetylide. The air‐stable and storable catalysts can be isolated as silver‐free catalysts in their activated form. These dual catalysts allow a fast initiation phase for the dual catalytic cycles without the need for additional additives for acetylide formation. Because propyne serves as a throw‐away ligand, no traces of the precatalyst are generated. Based on the fast initiation process, side products are minimized and reaction rates are higher for these catalysts. A series of test reactions were used to demonstrate the general applicability of these catalysts. Lower catalyst loadings, faster reaction rates, and better selectivity, combined with the practicability of these catalysts, make them ideal catalysts for dual gold catalysis. 相似文献
97.
98.
Leblond Sylvain Fichet Pascal Laumonier Rmi Billon Sophie Sardini Paul Colas Kimberly 《Journal of Radioanalytical and Nuclear Chemistry》2022,331(2):1075-1089
Journal of Radioanalytical and Nuclear Chemistry - A new method has been developed to image surface contamination on-site by short range radiation emitters (such as alpha or beta particle... 相似文献
99.
M. R. Ajayakumar Marco Di Giovannantonio Carlo A. Pignedoli Lin Yang Pascal Ruffieux Ji Ma Roman Fasel Xinliang Feng 《Journal of polymer science. Part A, Polymer chemistry》2022,60(12):1912-1917
The precise introduction of nonplanar pores in the backbone of graphene nanoribbon represents a great challenge. Here, we explore a synthetic strategy toward the preparation of nonplanar porous graphene nanoribbon from a predesigned dibromohexabenzotetracene monomer bearing four cove-edges. Successive thermal annealing steps of the monomers indicate that the dehalogenative aryl-aryl homocoupling yields a twisted polymer precursor on a gold surface and the subsequent cyclodehydrogenation leads to a defective porous graphene nanoribbon containing nonplanar [14]annulene pores and five-membered rings as characterized by scanning tunneling microscopy and noncontact atomic force microscopy. Although the C–C bonds producing [14]annulene pores are not achieved with high yield, our results provide new synthetic perspectives for the on-surface growth of nonplanar porous graphene nanoribbons. 相似文献
100.
Pascal Rusch Denis Pluta Dr. Franziska Lübkemann Dr. Dirk Dorfs Dr. Dániel Zámbó Prof. Nadja C. Bigall 《Chemphyschem》2022,23(2):e202100755
Employing nanocrystals (NCs) as building blocks of porous aerogel network structures allows the conversion of NC materials into macroscopic solid structures while conserving their unique nanoscopic properties. Understanding the interplay of the network formation and its influence on these properties like size-dependent emission is a key to apply techniques for the fabrication of novel nanocrystal aerogels. In this work, CdSe/CdS dot/rod NCs possessing two different CdSe core sizes were synthesized and converted into porous aerogel network structures. Temperature-dependent steady-state and time-resolved photoluminescence measurements were performed to expand the understanding of the optical and electronic properties of these network structures generated from these two different building blocks and correlate their optical with the structural properties. These investigations reveal the influence of network formation and aerogel production on the network-forming nanocrystals. Based on the two investigated NC building blocks and their aerogel networks, mixed network structures with various ratios of the two building blocks were produced and likewise optically characterized. Since the different building blocks show diverse optical response, this technique presents a straightforward way to color-tune the resulting networks simply by choosing the building block ratio in connection with their quantum yield. 相似文献