Creating σ‐Holes through the Formation of Beryllium Bonds

Through the use of ab initio theoretical models based on MP2/aug‐cc‐pVDZ‐optimized geometries and CCSD(T)/aug‐cc‐pVTZ and CCSD(T)/aug‐c‐pVDZ total energies, it has been shown that the significant electron density rearrangements that follow the formation of a beryllium bond may lead to the appearance of a σ‐hole in systems that previously do not exhibit this feature, such as CH₃OF, NO₂F, NO₃F, and other fluorine‐containing systems. The creation of the σ‐hole is another manifestation of the bond activation–reinforcement (BAR) rule. The appearance of a σ‐hole on the F atoms of CH₃OF is due to the enhancement of the electronegativity of the O atom that participates in the beryllium bond. This atom recovers part of the charge transferred to Be by polarizing the valence density of the F into the bonding region. An analysis of the electron density shows that indeed this bond becomes reinforced, but the F atom becomes more electron deficient with the appearance of the σ‐hole. Importantly, similar effects are also observed even when the atom participating in the beryllium bond is not directly attached to the F atom, as in NO₂F, NO₃F, or NCF. Hence, whereas the isolated CH₃OF, NO₂F, and NO₃F are unable to yield F ??? Base halogen bonds, their complexes with BeX₂ derivatives are able to yield such bonds. Significant cooperative effects between the new halogen bond and the beryllium bond reinforce the strength of both noncovalent interactions.     

Tailoring the physical properties of some high birefringence isothiocyanato-based liquid crystals

This paper describes the synthesis and characterization of several liquid crystal compounds having a tolane or terphenyl core structure and a high polarizability, isothiocyanato (NCS), terminal group. The synthesized compounds have high optical birefringerce (0.35 and 0.52), the highest being exhibited by the olefin-tolanes. Several eutectic mixtures are formulated and show improved properties over the single compounds, such as a broad nematic range, low melting temperature and relatively high clearing point. The birefringence of these mixtures is in the range 0.35–0.37. UV, viscosity and electro-optical measurements of the synthesized compounds are also reported. Dipole moment and polarizability calculations were made using CS-MOPAC and Hyperchem software computational programmes.     

Synthesis, thermal behavior, and spectral properties of mixed-metal Cu(I)-VO(IV)-thiourea coordination polymers

Abstract  

The heterometallic complexes [Cu(VO)₂(CSN₂H₄)₃Cl(OH)₄]·H₂O, [Cu₂(VO)₂(CSN₂H₄)₂(C₂H₃O₂)₂·(OH)₄], and [Cu₂(VO)₃(CSN₂H₄)₄(C₂H₃O₂)₄(OH)₄] were prepared and characterized in terms of their molecular electrical conductivity, electronic and IR spectra, and thermal behavior. A polymeric structure is proposed in which a thiourea ligand is bonded via a sulfur atom to the tetracoordinated copper(I) and via amino groups to the oxovanadium(IV) ion. The polymeric nature of the complexes is due to bridging via the OH, thiourea, and/or acetate moieties between oxovanadium(IV) coordination centers.     

Synthesis,characterization, crystal structure and toxicity evaluation of Co (II), Cu (II), Mn (II), Ni (II), Pd (II) and Pt (II) complexes with Schiff base derived from 2-chloro-5-(trifluoromethyl)aniline

A bidentate NO donor Schiff base, 2-(((2-chloro-5- (trifluoromethyl)phenyl)imino)methyl) phenol ( HL ¹ ) and its complexes [Co(L¹)₂(H₂O)₂] ( 1 ), [Cu(L¹)₂] ( 2 ), [Mn(L¹)₂(H₂O)₂] ( 3 ), [Ni(L¹)₂(H₂O)₂] ( 4 ), [Pd₂(L¹)₂(OAc)₂·1.16H₂O] ( 5 ), [Pt(L¹)₂] ( 6 ) were synthesized and characterized by different physico-chemical techniques including elemental and thermal analysis, magnetic susceptibility measurements, molar electric conductivity, IR, ¹H-NMR, ¹³C-NMR, UV–Vis, mass spectroscopies and X-ray powder diffraction (XRD). The molecular structures of ligand HL ¹ and two complexes ( 2 and 5 ) were confirmed by X-ray crystallography analysis on the monocrystal. In this complexes, the metal ions are in distorted square-planar environments. The copper (II) complex is mononuclear and crystallized in a monoclinic space group P21/c, whereas palladium (II) complex is dinuclear and crystallized in the trigonal crystal system R-3. The toxicity of the ligand and complexes was evaluated on both plant and animal cells, using the plant species Triticum aestivum L. and the crustacean Artemia franciscana Kellogg. At concentrations up to 100 μM the compounds presented very little toxicity on Artemia franciscana Kellogg. Moreover, the palladium (II) complex was devoid of any toxicity on the plant cells.     

Conformational preferences of RCH2CH2CN (R = CH3, F, Cl) cyanides and their corresponding isocyanides

The structure and relative stability of the different conformers of RCH₂CH₂CN (R = CH₃, F, Cl) cyanides and their corresponding isocyanides have been investigated through the use of high-level ab initio G4 theory as well as B3LYP/aug-cc-pVQZ and M06/aug-cc-pVQZ density functional theory calculations. This theoretical survey ratifies that the gauche conformer of butyronitrile is slightly more stable than the anti one, so that in the gas phase and at room temperature this compound should exist as a mixture of 57 % of the former and 43 % of the latter. Similar stability trends are predicted for the corresponding isocyanide isomer. Conversely, when the terminal methyl group of butyronitrile (or its isocyanide isomer) is replaced by F or Cl, the stability trends are reversed and the anti conformer becomes slightly more stable than the gauche one. These changes in relative stabilities could be traced through an analysis of the reduced density gradient which shows the existence of a stabilizing interaction between the terminal methyl group and the cyano (or isocyano) group in butyronitrile (or its isocyanide isomer), which becomes repulsive when this methyl group is replaced by F or Cl.     

New Copper(II) and Cobalt(II) Complexes with the N,N′-Bis(antipyryl-4-methyl)-piperazine (BAMP) Ligand: Co2(BAMP)Cl4 and [Cu(BAMP)(H2O)](ClO4)2

The syntheses and the crystal structures of the complexes Co₂(BAMP)Cl₄ ( 1 ) and [Cu(BAMP)(H₂O)](ClO₄)₂ (2 ) are reported. 1 crystallizes in the monoclinic space group C2/c with the unit cell dimensions a = 3129.7(4), b = 772.9(1), c = 1503.4(2) pm, β = 112.47(1)° and Z = 4. Cobalt(II) is surrounded in the fashion of a distorted tetrahedron built from the NO donor atoms of the BAMP ligand and two chloride anions. The copper compound 2 crystallizes in the monoclinic space group I2/a with unit cell dimensions of a = 2539.0(3), b = 1448.1(1), c = 1887.0(2) pm, β = 93.40(1)° and Z = 8. Copper(II) coordination can be described as a square-based pyramid with the N₂O₂ donor atoms of the BAMP molecule forming the basal plane completed by a water molecule in the apical position. Spectroscopic (IR and UV-Vis) and conductivity data of the new complex compounds are presented.     

Perturbation of the intramolecular hydrogen bonds of glucose by Cu+ association

A density functional theory study of glucose and glucose–Cu⁺ complexes has been performed to investigate the changes undergone by the set of intramolecular hydrogen bonds of the neutral system upon Cu⁺ association. The geometries of the different species investigated were optimized at the B3LYP/6‐31G(d,p) level. The same level of theory was used to obtain the harmonic vibrational frequencies and to analyze the electron charge density by means of the atoms in molecules theory. We have shown that the interaction with Cu⁺ strongly perturbs the set of intramolecular hydrogen bonds of the neutral. Some of these changes are a direct consequence of the conformational changes induced by the metal, which result in the breaking of some of the existing bonds or in the formation of new ones. The most important point, however, is that the intramolecular hydrogen bonds that remain are perturbed to a different extent. In general, all hydrogen bonds in which the OH donor interacts directly with the metal cation are significantly stabilized while the remaining ones become weaker. These changes influence the relative stability of the complexes as well as its capacity to interact with other systems. © 2001 John Wiley & Sons, Inc. Int J Quantum Chem, 2001