Isolation of heptadepsin, a novel bacterial cyclic depsipeptide that inhibits lipopolysaccharide activity

Lipopolysaccharide (LPS) is considered to cause various inflammatory reactions. We searched among microbial secondary metabolites for compounds that could inhibit LPS-stimulated adhesion between human umbilical vein endothelial cells (HUVEC) and human myelocytic cell line HL-60 cells. In the course of our screening, we isolated a novel cyclic depsipeptide, which we named heptadepsin, from the whole culture broth of Paenibacillus sp. The addition of heptadepsin prior to LPS stimulation decreased HL-60 cell-HUVEC adhesion without showing any cytotoxicity. It also inhibited the cellular adhesion induced by lipid A, the active component of LPS, but it did not inhibit TNF-alpha or IL-1beta-induced cell adhesion. The result of surface plasmon resonance (SPR) analysis revealed that heptadepsin interacted with lipid A directly. Thus, heptadepsin, a novel naturally occurring cyclic heptadepsipeptide, was shown to inactivate LPS by direct interaction with LPS.     

Conformations and steric and stacking interactions of trisubstituted ureas and thioureas with alkyl and phenyl groups

The monomeric ν(N—H) vibrations of various trisubstituted ureas of the R₂UPh type and -thioureas of the R₂TUPh type have been studied. The trans—out isomerism in the former and the trans—out—cis isomerism in the latter are discussed from the point of view of steric effect. The monomeric ν(N—H) vibrations of RPhUPh and RPhTUPh are also examined. The single band appearing in the spectrum of both ureas is characteristic of the cis form; this suggests the existence of phenyl—phenyl interaction (the stacking interaction proposed by Galabov et al. [10]). Behavior of ν(N—H) vibrations at several concentrations is shown to be clearly different in the three forms (trans, out and cis). The presence of the cis form is confirmed by solvent effect experiments.     

Development of a cooled He*(23S) beam source for measurements of state-resolved collision energy dependence of Penning ionization cross sections: Evidence for a stereospecific attractive well around methyl group in CH3CN

A low-temperature discharge nozzle source with a liquid-N(2) circulator for He*(2(3)S) metastable atoms has been developed in order to obtain the state-resolved collision energy dependence of Penning ionization cross sections in a low collision energy range from 20 to 80 meV. By controlling the discharge condition, we have made it possible to measure the collision energy dependence of partial ionization cross sections (CEDPICS) for a well-studied system of CH(3)CN+He*(2(3)S) in a wide energy range from 20 to 350 meV. The anisotropic interaction potential energy surface for the present system was obtained starting from an ab initio model potential via an optimization procedure based on classical trajectory calculations for the observed CEDPICS. A dominant attractive well depth was found to be 423 meV (ca. 10 kcal/mol) at a distance of 3.20 A from the center of mass of CH(3)CN in the N-atom side along the CCN axis. In addition, a weak attractive well (ca. 0.9 kcal/mol) surrounding the methyl group (-CH(3)) has been found and ascribed to the interaction between an unoccupied molecular orbital of CH(3)CN and 2s atomic orbital of He*(2(3)S).     

An ab initio calculation of symmetric bending and stretching vibrational states of the H3O+ and D3O+ ions

Calculations are reported for the symmetric bending and stretching vibrational states of H₃O⁺ and D₃O⁺ including coupling between these two modes. The calculations were carried out by using a potential surface calculated by the SCF CI method and expressed in terms of symmetric internal coordinates. The transition energy of the ν₂ (1^? ← 0⁺) inversion mode is found to be 985 cm^?1, which is comparable to the experimental value of 954.417 cm^?1 observed by Haese and Oka. The calculated inversion doubling of the lowest state is 51 cm^?1.     

Development of hydrophilic fluorogenic derivatization reagents for thiols: 4-(N-acetylaminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole and 4-(N-trichloroacetylaminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole

Sensitive, reactive, and hydrophilic fluorogenic reagents for thiols with the benzofurazan skeleton, 4-(N-acetylaminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole (AcABD-F) and 4-(N-trichloroacetylaminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole (TCAcABD-F) have been developed. These reagents reacted with thiols within 10 min at 60 degrees C. AcABD-F and TCAcABD-F themselves do not fluoresce but are strongly fluorescent after the reaction with thiol compounds. The generated derivatives were highly water-soluble, since they dissociated a proton and ionized in the neutral pH region. The derivatives with four biologically important thiol compounds were separated on a reversed-phase HPLC column and detected fluorometrically at 504 nm with excitation at 388 nm. The detection limit attained for homocysteine with AcABD-F was 25 fmol on column (11 nM) (signal-to-noise ratio = 3), and that for glutathione with TCAcABD-F was 45 fmol on column (20 nM).     

Acidic properties of V2O5-WO3/ZrO2 catalysts

The adsorption of pyridine on V₂O₅−WO₃/ZrO₂ has been studied by FTIR. In V₂O₅/ZrO₂ (2 wt.%), the number of both Br?nsted and Lewis acidic sites increased with the addition of WO₃, while in V₂O₅/ZrO₂ (5 wt.%), Br?nsted sites increased and Lewis sites did not change.     

Preliminary calculations on excited states of the oxygen molecule

It is well known that the energy interval separating ³ _u ^– and ³ _u ⁺ states of O₂, as given by the conventional ASMO method, is too large. In order to resolve this difficulty, removal of the equivalence restrictions usually employed in the orbital theory is proposed. Thus the orbital exponent of one antibonding _g MO is allowed to take a different value from the other _g's. Variational calculations show that the resulting outermost orbital is much more diffuse than the others. This model of a single diffuse orbital brings about a considerable energy lowering for the ³ _u ^– state and thus the agreement of the ³ _u ^– - ³ _u ⁺ interval with experiment is improved.

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Zusammenfassung Die konventionelle ASMO-Theorie liefert bekanntlich eine viel zu große Differenz der Terme ³ _u ^– und ³ _u ⁺ von O₂, weswegen der Vorschlag gemacht wird, die üblicherweise vorgenommene Äquivalenz-Einschränkung fallen zu lassen. Der Orbital-Exponent eines lockernden MO's kann von dem der übrigen _g's abweichen. Rechnungen zeigen, daß das äußerste MO viel diffuser als die anderen ist und daß die Energie des ³ _u ^– -Zustandes beträchtlich erniedrigt wird.

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Résumé La séparation entre les états ³ _u ^{– 3} _u ⁺ de O₂ donnée par la méthode ASMO conventionnelle est connue pour être trop grande. Afin de résoudre cette difficulté la levée des restrictions d'équivalence ordinairement utilisées est proposée. Ainsi l'exposant orbital d'une des orbitales moléculaires antiliantes _g peut prendre une valeur différente de celui de l'autre orbitale antiliante _g. Des calculs variationnels montrent que l'orbitale la plus haute ainsi obtenue est beaucoup plus diffuse que les autres. Ceci a pour effet de diminuer considérablement l'énergie de l'état ³ _u ^– , améliorant la séparation entre les états ³ _u ^– et ³ _u ⁺ .

     

Complete 1H and 13C NMR assignments of two phytosterols from roots of Piper nigrum

Using modern NMR techniques, including DQF-COSY, NOESY, HETCOR and HMBC, the full assignments of all 1H and 13C chemical shifts were made for stigmastane-3,6-dione and stigmast-4-ene-3,6-dione, isolated from the roots of Piper nigrum (Piperaceae). Their stereochemistry was resolved by a combination of 2D NOESY data and analysis of coupling constants. The two compounds were isolated from the genus Piper for the first time.