Theoretical analysis of the porphyrin-porphyrin exciton interaction in circular dichroism spectra of dimeric tetraarylporphyrins

Chiral bis-porphyrins are currently the subject of intense interest as chiral receptors and as probes in the determination of structure and stereochemistry. To provide an improved framework for interpreting the circular dichroism (CD) spectra of bis-porphyrins, we have calculated the CD spectra of chiral bis-porphyrins from three classes: I, where porphyrins can adopt a relatively wide range of orientations relative to each other; II, porphyrins have a fixed relative orientation; III, porphyrins undergo pi-stacking. The calculations primarily utilized the classical polarizability theory of DeVoe, but were supplemented by the quantum mechanical matrix method. Class I was represented by three isomers of the diester of 5alpha-cholestane-3,17-diol with 5-(4'-carboxyphenyl)-10,15,20-triphenylporphin (2-alphabeta, 2-betaalpha, 2-betabeta). Careful analysis of the torsional degrees of freedom led to two to four minimum-energy conformers for each isomer, in each of which the phenyl-porphyrin bonds had torsional angles near 90 degrees. Libration about these bonds is relatively unrestricted over a range of +/-45 degrees. CD spectra in the Soret region were calculated as Boltzmann-weighted averages over the low-energy conformers for each isomer. Three models were used: the effective transition moment model, in which only one of the degenerate Soret components is considered, along the 5-15 direction; the circular oscillator model, in which both Soret components are given equal weight; and the hybrid model, in which the 10-20 oscillator is given half the weight of the 5-15 oscillator, to mimic the effect of extensive librational averaging about the 5-15 direction. All three models predict Soret exciton couplets with signs in agreement with experiment. Quantitatively, the best results are given by the hybrid and circular oscillator models. These results validate the widely used effective transition moment model for qualitative assignments of bis-porphyrin chirality and thus permit application of the exciton chirality model. However, for quantitative studies, the circular oscillator or hybrid models should be used. The simplified effective transition moment and hybrid models are justified by the librational averaging in the class I bis-porphyrins and should only be used with such systems. Two class II bis-porphyrins were also studied by DeVoe method calculations in the circular oscillator model, which yielded good agreement with experiment. Class III bis-porphyrins were represented by 2-alphaalpha, for which the calculations gave qualitative agreement. However, limitations in the conformational analysis with the close contacts and dynamic effects in these pi-stacked systems preclude quantitative results.     

Approaches for the analysis of low molecular weight compounds with laser desorption/ionization techniques and mass spectrometry

This review summarizes various approaches for the analysis of low molecular weight (LMW) compounds by different laser desorption/ionization mass spectrometry techniques (LDI-MS). It is common to use an agent to assist the ionization, and small molecules are normally difficult to analyze by, e.g., matrix assisted laser desorption/ionization mass spectrometry (MALDI-MS) using the common matrices available today, because the latter are generally small organic compounds themselves. This often results in severe suppression of analyte peaks, or interference of the matrix and analyte signals in the low mass region. However, intrinsic properties of several LDI techniques such as high sensitivity, low sample consumption, high tolerance towards salts and solid particles, and rapid analysis have stimulated scientists to develop methods to circumvent matrix-related issues in the analysis of LMW molecules. Recent developments within this field as well as historical considerations and future prospects are presented in this review.     

Nanostructures of noble metals as functional materials in biosensors

Recent advancement in nanoscience and nanotechnologies inspired a wide spectrum of uses of nanodimensional materials ranging from industrial sector to biomedical applications. Inorganic nanomaterials made of noble metals, which are corrosion-resistant, are often included as electrode modifiers in designing electrochemical chemosensors and biosensors because of their unique catalytic, electric, and surface-related properties. This review summarizes the developments in electrochemical biosensors with integrated in their architecture metal nanostructures reported mainly during the last two years with a summary on some of the commonly used methods for the synthesis of metallic nanostructures. Nanodimensional noble metal structures might be considered as multipurpose electrode modifiers because of their abilities to act at the same time as electrocatalysts, signal amplifiers, and tools for immobilization and spatial orientation of redox proteins/enzymes or other type of bioreceptors.     

Simultaneous spreading and evaporation: Recent developments

The recent progress in theoretical and experimental studies of simultaneous spreading and evaporation of liquid droplets on solid substrates is discussed for pure liquids including nanodroplets, nanosuspensions of inorganic particles (nanofluids) and surfactant solutions. Evaporation of both complete wetting and partial wetting liquids into a nonsaturated vapour atmosphere are considered. However, the main attention is paid to the case of partial wetting when the hysteresis of static contact angle takes place. In the case of complete wetting the spreading/evaporation process proceeds in two stages. A theory was suggested for this case and a good agreement with available experimental data was achieved. In the case of partial wetting the spreading/evaporation of a sessile droplet of pure liquid goes through four subsequent stages: (i) the initial stage, spreading, is relatively short (1–2 min) and therefore evaporation can be neglected during this stage; during the initial stage the contact angle reaches the value of advancing contact angle and the radius of the droplet base reaches its maximum value, (ii) the first stage of evaporation is characterised by the constant value of the radius of the droplet base; the value of the contact angle during the first stage decreases from static advancing to static receding contact angle; (iii) during the second stage of evaporation the contact angle remains constant and equal to its receding value, while the radius of the droplet base decreases; and (iv) at the third stage of evaporation both the contact angle and the radius of the droplet base decrease until the drop completely disappears. It has been shown theoretically and confirmed experimentally that during the first and second stages of evaporation the volume of droplet to power 2/3 decreases linearly with time. The universal dependence of the contact angle during the first stage and of the radius of the droplet base during the second stage on the reduced time has been derived theoretically and confirmed experimentally. The theory developed for pure liquids is applicable also to nanofluids, where a good agreement with the available experimental data has been found. However, in the case of evaporation of surfactant solutions the process deviates from the theoretical predictions for pure liquids at concentration below critical wetting concentration and is in agreement with the theoretical predictions at concentrations above it.     

Reactions of 2- and 4-pyrones with secondary phosphine chalcogenides: a facile synthesis of functional phosphorylated pyrones

The oxidative cross-coupling between 4-hydroxy-6-methyl-2-pyrone or 3-hydroxy-2-methyl-4-pyrone and secondary phosphine chalcogenides proceeds in CCl₄/Et₃N under mild conditions (20–52 °С, 0.75–10 h) through the hydroxyl group to give O-(6-methyl-2-oxo-2H-pyran-4-yl) diorganylphosphinochalcogenoates or O-(2-methyl-4-oxo-4H-pyran-3-yl) diorganylphosphinochalcogenoates, in high yields.     

Cu(II) coordination polymers incorporating 3-aminopyridine and flexible aliphatic dicarboxylate ligands: Synthesis,structure and magnetic properties

The synthesis, structural chemistry and magnetic properties of a series of new Cu(II) polymers with α,ω-dicarboxylic acids (sebacic (H₂seb), suberic (H₂sub), succinic (H₂suc) and adipic (H₂adip)) and 3-aminopyridine (3-apy) are described: [Cu(Hsub)₂(3-apy)₂·2CH₃OH]_n (1); [Cu(Hseb)₂(3-apy)₂·4CH₃OH]_n (2); [Cu(Hsuc)₂(3-apy)₂]_n (3); [Cu(adip)(3-apy)₂]_n·n(H₂adip) (4). All four compounds feature a bis-monodentate bridging mode of the coordinated dicarboxylate moiety. Compounds 1 and 2 exhibit linear chains, whereas compound 3 shows two-dimensional structure. The 3-apy ligand acts as terminal ligand in 1–3. Compound 4 contains a doubly deprotonated adipate (adip²⁻) that connects Cu centers into linear chains. Additionally, 3-apy acts as a bridge in 4, resulting in the formation of parallel two-dimensional layers distant enough to host neutral molecules of adipic acid. Magnetic susceptibility measurements of compounds 1 and 3 show Curie law behavior indicating that the S = 1/2 Cu(II) spin carriers are magnetically well isolated by the dicarboxylate ligands.     

Bifurcate hydrogen bonds. Interaction of intramolecularly H-bonded systems with Lewis bases

The structure and the hydrogen bonding in the systems formed by the intramolecularly H-bonded systems, namely, maltol (3-hydroxy-2-methyl-4-pyrone), 5, 2,4,6-trinitrophenol, 6, acetylacetone enol, 7, with Lewis bases, phosgene, 8, dioxane, 9, and DMSO, 10, have been studied by density functional theory (B3LYP) and MP2 using the 6-311G* basis set. The continuum solvent effect was simulated by IEF-PCM model. The hydrogen bond analysis using the atoms in molecules (AIM) method was applied by using the MP2(full)/6-311++G** electron density to establish the nature of the bifurcate hydrogen bond (BHB) in these systems as well as contributory factors for its stabilization. The nature of interaction in the intermolecular H-complexes formed by compounds 5- 7 with the Lewis bases 8- 10 was shown to depend on the strength of the intramolecular hydrogen bond O...H and the strength of the base. The critical values of the CO...H and NO...H angles for which the formation of BHB is possible, have been determined.     

From lithium ketazides to isomeric silylketazine-rings - imine-enamine tautomerism

Di(tert-butylmethyl)ketazine (I) reacts with n-BuLi in a 1:1 molar ratio to give a monolithium salt (II). The reaction of II with ^tBu₂SiF₂ in n-hexane leads, even in a 1:1 molar ratio, to the formation of the isomeric five- and four-membered ring compounds 1 and 2. Compound 1 has an endocyclic imine and an exocyclic enamine unit. The opposite is found for 2. The acyclic monosubstitution product, ^tBu₂SiFCH₂-C^tBuN-NC^tBuCH₃ (III) could not be isolated. It reacts with the lithium ketazide to give 1 or 2. I is reformed. The reaction in THF yields only the four-membered ring 2. In a comparable reaction of the lithium ketazide and (H₃C)₂SiF₂, the substitution product 3 could be isolated. A possible formation mechanism for 2 includes an intermediate silene IV. Both compounds 1 and 2 react with H₃C-OH under cleavage of the endocyclic Si-N-bond to give the addition product 5. The reaction mechanism includes a hydrogen shift from a nitrogen atom to a carbon atom via an imine-enamine tautomerism. In a 2:1 molar ratio, n-BuLi and the di(tert-butylmethyl)-ketazine (I) form the dilithium salt, 6. Compound 6 crystallizes from THF as trimer with four imine and two enamine units. A seven-membered ring (7) isomeric to 1 and 2 is the result of the reaction of 6 with ^tBu₂SiF₂. Compound 7 contains one imine and one enamine unit in the ring skeleton.The comparable reaction of the (CH₃)₃Si-substituted dilithium-di(tert-butylmethyl)ketazide and ^tBu₂SiF₂ yields the five-membered ring compound 8 with one endocyclic imine and one exocyclic enamine unit.Quantum chemical calculations of 1, 2, 7 and the intermediate silene IV have been carried out and show a low energy difference between the cyclic silyl-ketazine isomers.     

Induction of ionic smectic C phases: a systematic study of alkyl-linked guanidinium-based liquid crystals

A series of ionic liquid crystals with an alkoxy biphenyl unit tethered via an alkyl spacer to a guanidinium head group were synthesised and the mesomorphic properties were studied by differential scanning calorimetry, polarising optical microscopy and X-ray diffraction (XRD; WAXS and SAXS). Whereas all symmetrical guanidinium chlorides with the same chain lengths in alkyl tail and spacer displayed enantiotropic SmA₂ phases, monotropic SmC₂ phases with 1–2 K temperature range were only formed for chain lengths ≥ C₁₀. Shifting the calamitic core more closely to the ionic head group by decreasing the tether length and simultaneously increasing the terminal alkyl chain improved the stability of both SmA and SmC phases considerably and led to enantiotropic SmC phases for the guanidinium chloride with C₁₄ alkyl tail and C₆ spacer. An even more pronounced effect was detected during anion exchange. Bromide, iodide, hexafluorophosphate, thiocyanate and triflate suppressed any SmC phase, whereas tetrafluoroborate behaved similar to chloride maintaining the SmC phase. However, acetate stabilised the SmC phase at the expense of the SmA phase. Based on temperature-dependant XRD measurements, a bilayer structure was proposed.     

Acoustic Radiation Force Impulse-Imaging for the evaluation of the thyroid gland: a limited patient feasibility study

Purpose

Real-time tissue elastography, a qualitative elastography method, has shown promising results in the diagnostic work up of thyroid nodules. However, to our knowledge no study has evaluated a quantitative elastography method in the thyroid gland. The present study is a feasibility study evaluating Acoustic Radiation Force Impulse-Imaging, a novel quantitative elastography method in the thyroid gland.

Methods

ARFI-imaging involves the mechanical excitation of tissue using short-duration acoustic pulses to generate localized displacements in tissue. The displacements induce a lateral shear-wave propagation which is tracked using multiple laterally positioned ultrasound “tracking“ beams. Inclusion criteria were: thyroid nodules ?1 cm, non-functioning or hypo-functioning on radionuclide scanning, and cytological/histological assessment of thyroid nodule as reference method. All patients received conventional ultrasound, and examination of the thyroid gland including Power Doppler Ultrasound using a 9 MHz linear transducer, in addition real-time elastography (RTE) was performed at 9 MHz frequency and ARFI-imaging was performed at 4 MHz using Siemens (ACUSON S2000) B-mode-ARFI combination transducer.

Results

Sixty nodules in 55 patients were analyzed. Three nodules were papillary carcinoma. The stiffer the tissue the faster the shear wave propagates. The results obtained indicated that the shear wave velocity in thyroid lobes ranged between 0.5 and 4.9 m/s. The median velocity of ARFI-imaging in the healthy nodule-free thyroid gland, as well as in benign and malignant thyroid nodules was 1.98 m/s (range: 1.20-3.63 m/s), 2.02 m/s (range: 0.92-3.97 m/s), and 4.30 m/s (range: 2.40-4.50 m/s), respectively. While no significant difference in median velocity was found between healthy thyroid tissue and benign thyroid nodules, a significant difference was found between malignant thyroid nodules on the one hand and healthy thyroid tissue (p = 0.018) or benign thyroid nodules (p = 0.014) on the other hand. Specificity of ARFI-imaging for the differentiation of benign and malignant thyroid nodules was comparable with RTE (91-95%).

Conclusions

ARFI can be performed in the thyroid tissue with reliable results.