Construction of double-stranded metallosupramolecular polymers with a controlled helicity by combination of salt bridges and metal coordination

We describe the construction of the first double-stranded metallosupramolecular helical polymers. We designed and synthesized a supramolecular duplex comprised of complementary m-terphenyl-based strands bearing a chiral amidine or achiral carboxylic acid together with two pyridine groups at the four ends. Supramolecular polymerization of the duplex with cis-PtPh2(DMSO)2 in 1,1,2,2-tetrachloroethane produced the double-stranded metallosupramolecular polymer with a controlled helicity of which the two complementary metallostrands are intertwined through the amidinium-carboxylate salt bridges. The structures and hydrodynamic dimensions of the metallosupramolecular polymers were characterized by 1H NMR, diffusion-ordered NMR, dynamic light scattering, absorption, and CD measurements. The polymeric structure was also visualized by atomic force microscopy.     

Cation-pi interaction in the polyolefin cyclization cascade uncovered by incorporating unnatural amino acids into the catalytic sites of squalene cyclase

It has been assumed that the pi-electrons of aromatic residues in the catalytic sites of triterpene cyclases stabilize the cationic intermediates formed during the polycyclization cascade of squalene or oxidosqualene, but no definitive experimental evidence has been given. To validate this cation-pi interaction, natural and unnatural aromatic amino acids were site-specifically incorporated into squalene-hopene cyclase (SHC) from Alicyclobacillus acidocaldarius and the kinetic data of the mutants were compared with that of the wild-type SHC. The catalytic sites of Phe365 and Phe605 were substituted with O-methyltyrosine, tyrosine, and tryptophan, which have higher cation-pi binding energies than phenylalanine. These replacements actually increased the SHC activity at low temperature, but decreased the activity at high temperature, as compared with the wild-type SHC. This decreased activity is due to the disorganization of the protein architecture caused by the introduction of the amino acids more bulky than phenylalanine. Then, mono-, di-, and trifluorophenylalanines were incorporated at positions 365 and 605; these amino acids reduce cation-pi binding energies but have van der Waals radii similar to that of phenylalanine. The activities of the SHC variants with fluorophenylalanines were found to be inversely proportional to the number of the fluorine atoms on the aromatic ring and clearly correlated with the cation-pi binding energies of the ring moiety. No serious structural alteration was observed for these variants even at high temperature. These results unambiguously show that the pi-electron density of residues 365 and 605 has a crucial role for the efficient polycyclization reaction by SHC. This is the first report to demonstrate experimentally the involvement of cation-pi interaction in triterpene biosynthesis.     

Intersite structural rearrangement of the blue copper site induced by substrate binding: spectroscopic studies of a copper-containing nitrite reductase from Alcaligenes xylosoxidans NCIMB 11015

A copper-containing nitrite reductase from Alcaligenes xylosoxidans NCIMB 11015 has its own unique blue or type 1 copper protein resonance Raman spectrum in the usual Cu-S(Cys) stretching region, nu(Cu-S(Cys)), with a pair of strong peaks at 412 and 420 cm(-1) and a weak peak at 364 cm(-1). The predominantly nu(Cu-S(Cys)) Raman bands at 412, 420, and 364 cm(-1) of the type 1 copper site all shifted to higher frequencies upon binding of nitrite to the type 2 copper site, and the resonance Raman difference spectra progressively intensified with the increments of nitrite ion concentration. Positive support for substrate binding to the type 2 copper is provided by the nu(Cu-S(Cys)) bands in the resonance Raman spectrum of a type 2 copper-depleted enzyme, which is insensitive to the presence of NO2-. The shift to higher frequency of the Raman bands of the type 1 copper center with the addition of nitrite ions suggests a stronger Cu-S(Cys) interaction in the substrate-bound A. xylosoxidans nitrite reductase.     

Study on 1,3,5‐Triazine Chemistry in Dehydrocondensation: Gauche Effect on the Generation of Active Triazinylammonium Species

The reaction of 2‐chloro‐4,6‐dimethoxy‐1,3,5‐triazine (CDMT) with various nitrogen‐containing compounds, particularly tertiary amines (tert‐amines), has been studied for the preparation of 2‐(4,6‐dimethoxy‐1,3,5‐triazinyl)trialkylammonium salts [DMT‐Am(s)]. DMT‐Ams derived from aliphatic tert‐amines exhibited activity for the dehydrocondensation between a carboxylic acid and an amine to form an amide in a model reaction. Based on a conformational analysis of DMT‐Ams and tert‐amines by NMR and X‐ray diffraction methods, we concluded that a β‐alkyl group maintained in a gauche relationship with the nitrogen lone pair of tert‐amines significantly hinders the approach of CDMT to the nitrogen. Thus, trimethylamine and quinuclidine without such alkyl groups readily react with CDMT whereas triethylamine, possessing two or three such gauche β‐alkyl groups in the stable conformations, does not react at all. The theory of “gauche β‐alkyl group effect” proposed here provides useful guidelines for the preparation of DMT‐Ams possessing various tertiary amine moieties. An investigation of the dehydrocondensation activity of tert‐amines in a CDMT/tert‐amine system that involves in situ generation of DMT‐Am, showed that the gauche effect of the β‐alkyl group becomes quite pronounced; the yield of the amide decreases significantly with tert‐amines possessing an unavoidable gauche β‐alkyl group. Thus, the tert‐amine/CDMT systems are useful for judging whether tert‐amines can readily react with CDMT without isolation of DMT‐Ams.     

Reduction of thermal fluctuations in a cryogenic laser interferometric gravitational wave detector

The thermal fluctuation of mirror surfaces is the fundamental limitation for interferometric gravitational wave (GW) detectors. Here, we experimentally demonstrate for the first time a reduction in a mirror's thermal fluctuation in a GW detector with sapphire mirrors from the Cryogenic Laser Interferometer Observatory at 17 and 18 K. The detector sensitivity, which was limited by the mirror's thermal fluctuation at room temperature, was improved in the frequency range of 90 to 240 Hz by cooling the mirrors. The improved sensitivity reached a maximum of 2.2×10(-19) m/√Hz at 165 Hz.     

Preparation of Co–Al and Ni–Al layered double hydroxide thin films by a sol–gel process with hot water treatment

Using hot water treatment of sol–gel derived precursor gel films, Co–Al and Ni–Al layered double hydroxide (LDH) thin films were prepared. The precursor gel films of Al₂O₃–CoO or Al₂O₃–NiO were prepared from cobalt or nickel nitrates and aluminum tri-sec-butoxide using the sol–gel method. Then, the precursor gel films were immersed in a NaOH aqueous solution of 100 °C. Nanocrystallites of Co–Al and Ni–Al LDH were precipitated with the hot water treatment with NaOH solution. The largest amounts of nanocrystals were obtained with a solution of pH = 10 for Co–Al LDH, and with that of pH = 9 for Ni–Al LDH. X-ray diffraction measurements confirmed that this process formed CO₃ ²⁻ intercalated LDHs. Both Co–Al and Ni–Al LDH thin films were confirmed to work as electrodes for electrochemical devices by cyclic voltammogram measurements.     

Layered hydroxide nickel benzoates: Hydrothermal synthesis, structure characterization, and exfoliation reaction

Mussel adhesive proteins have received considerable attention due to their ability to bind strongly to many surfaces under water. Key structural features of these proteins include a large number of 3,4-dihydroxyphenyl-L-ALANIN (DOPA) and positively charged lysine residues. We elucidate the effects of solution pH, in the pH range 3-9, on adsorption kinetics, adsorbed amount, and layer structure on silicon oxynitride by employing Dual Polarization Interferometry. As a comparison, the cationic globular protein lysozyme was also investigated. The zeta-potential of the silicon oxynitride substrate was determined as a function of pH, and the isoelectric point was found to be below pH 3. Mefp-1 is positively charged at pH<10, and thus, the protein is expected to have an electrostatic attraction for the surface at all pH values investigated. The adsorbed amount and the initial adsorption rate were found to increase with solution pH, and no significant desorption occurred due to rinsing with pure water. The layer thickness after rinsing was 3-4 nm, except at pH 3, where the adsorption was limited to a small amount. Covalent cross-linking of the Mefp-1 layer with NaIO(4) resulted in a small but significant compaction and increase in refractive index of the layer. The results are discussed in terms of the role of DOPA and electrostatic interactions for the adsorption of Mefp-1 to silicon oxynitride.     

Formulation study on retinoic acid gel composed of iota-carrageenan, polyethylene oxide and Emulgen® 408

In the present study, all-trans retinoic acid (RA) gels formulated with various compositions of polyethylene oxide (Emulgen?) and iota-carrageenan (ι-CG) were prepared and their physicochemical properties were evaluated. The compression energy, which is the work required to compress the product through a fixed distance, increased with increasing amount of ι-CG or Emulgen?. The adhesion energy and displacement decreased with increasing amount of ι-CG or Emulgen? due to the progression of gel formation. From the results of the sensory tests, the properties of RA gels such as adhesiveness, gel strength and spreadability seemed to be adjustable depending on the condition of skin by varying the components of RA gels. Through photostability study, the expiration date and storage conditions of RA gels were determined as "4°C for 28?d with no exposure to light."     

Mineral composition of frozen taro for determination of geographic origin

The mineral composition of frozen food of taro [Colocasia esculenta (L.) Schott] was analyzed to categorize the geographical production place of taro. The concentrations of Co and H₂PO₄ ⁻ were found to be useful to separate the producing place between Japan and China. The analysis was performed by instrumental neutron activation analysis (INAA) and ion chromatography (IC). In the case of INAA, the samples were dried and sealed in a vinyl bag and irradiated with thermal neutrons from JRR3M, installed at Japan Atomic Energy Agency (JAEA). The activated samples were cooled down for a few weeks and the elements (Co, Cr, Fe, Rb, Zn) were determined. Cobalt concentration of frozen taro from China was higher than that from Japan. The tendency was the same in the fresh sample of taro. When concentration of H₂PO₄ ⁻ of frozen sample was measured, taro from Japanese product was higher than that of Chinese one, contrary to fresh sample. This result might be caused by the leakage of H₂PO₄ ⁻ during freezing process, indicating that we should be careful to apply the discrimination indicators. In addition to Co, there was a significant difference of Rb and Fe concentrations between frozen taro from Japan and China.     

Cu NMR/NQR Studies on Magnetism in Impurity/Hole-Doped Spin-Ladder Compounds

Cu nuclear magnetic resonance (NMR) spectra of impurities (Zn, Ni, and La)-doped spin-1/2 Heisenberg ladder compounds SrCu₂O₃ (Sr123) are broadened with Curie-like temperature (T) dependence. The spectra have been successfully fit by using a quasi-one-dimensional (Q1D) staggered polarization (SP) model. Such a SP has also revealed in Cu NMR measurements of Sr_14–x Ca _x Cu₂₄O₄₁ (Cax) with hole-doped ladders. The origin of possible 3D antiferromagnetic (AF) long-range ordering in (Zn and Ni)-doped Sr123 and Cax around x=12 at low T is considered to be similar. Once unpaired spins S ₀'s are induced and 3D interlayer interaction occurs, the localized spins couple in the whole system.