Deuterium kinetic isotope effects on the dissociation of a protein-fatty acid complex in the gas phase

Deuterium kinetic isotope effects (KIEs) are reported for the first time for the dissociation of a protein-ligand complex in the gas phase. Temperature-dependent rate constants were measured for the loss of neutral ligand from the deprotonated ions of the 1:1 complex of bovine β-lactoglobulin (Lg) and palmitic acid (PA), (Lg + PA)(n-) → Lg(n-) + PA, at the 6- and 7- charge states. At 25 °C, partial or complete deuteration of the acyl chain of PA results in a measurable inverse KIE for both charge states. The magnitude of the KIEs is temperature dependent, and Arrhenius analysis of the rate constants reveals that deuteration of PA results in a decrease in activation energy. In contrast, there is no measurable deuterium KIE for the dissociation of the (Lg + PA) complex in aqueous solution at pH 8. Deuterium KIEs were calculated using conventional transition-state theory with an assumption of a late dissociative transition state (TS), in which the ligand is free of the binding pocket. The vibrational frequencies of deuterated and non-deuterated PA in the gas phase and in various solvents (n-hexane, 1-chlorohexane, acetone, and water) were established computationally. The KIEs calculated from the corresponding differences in zero-point energies account qualitatively for the observation of an inverse KIE but do not account for the magnitude of the KIEs nor their temperature dependence. It is proposed that the dissociation of the (Lg + PA) complex in aqueous solution also proceeds through a late TS in which the acyl chain is extensively hydrated such that there is no significant differential change in the vibrational frequencies along the reaction coordinate and, consequently, no significant KIE.     

Critical current measurement on Y-Ba-Cu-O

We report critical current measurements on sintered Y_0.35Ba_0.65CuO_y. The sample, in the perovskite phase, shows zero resistance at 87 K. The critical current transition is seen, in zero field and at 77 K, at a current densityJ _c of 50 A/cm².     

Photoelectron spectroscopy of bis(2,4-pentanedione)-oxovanadium(IV) [VO(acac)(2)] and derivatives: substituent effects on the 2,4-pentanedione donor

The electronic structure of derivatives of VO(acac)(2) is probed using gas-phase UV-photoelectron spectroscopy [acac = 2,4-pentanedione]. The effect on the metal center of electron-donating and -withdrawing groups on the acac ligands is examined. Ionizations from metal-based, acac-based, and V=O-based orbitals are clearly observed. We find that changes at the ligand periphery lead to equivalent changes in the energies of the metal-based and ligand-based ionizations. Additionally, we find that a linear correlation exists between the ionization energies of the metalated complexes and the pK(a) values of the free ligands, indicating that the pK(a) is a good indication of the overall electron-donating abilities of acac ligands.     

Discussion on a possible neutrino detector located in India

We have identified some important and worthwhile physics opportunities with a possible neutrino detector located in India. Particular emphasis is placed on the geographical advantage with a stress on the complimentary aspects with respect to other neutrino detectors already in operation.     

1D Simulations for Microbial Enhanced Oil Recovery with Metabolite Partitioning

We have developed a mathematical model describing the process of microbial enhanced oil recovery (MEOR). The one-dimensional isothermal model comprises displacement of oil by water containing bacteria and substrate for their feeding. The bacterial products are both bacteria and metabolites. In the context of MEOR modeling, a novel approach is partitioning of metabolites between the oil and the water phases. The partitioning is determined by a distribution coefficient. The transfer part of the metabolite to oil phase is equivalent to its ”disappearance,” so that the total effect from of metabolite in the water phase is reduced. The metabolite produced is surfactant reducing oil–water interfacial tension, which results in oil mobilization. The reduction of interfacial tension is implemented through relative permeability curve modifications primarily by lowering residual oil saturation. The characteristics for the water phase saturation profiles and the oil recovery curves are elucidated. However, the effect from the surfactant is not necessarily restricted to influence only interfacial tension, but it can also be an approach for changing, e.g., wettability. The distribution coefficient determines the time lag, until residual oil mobilization is initialized. It has also been found that the final recovery depends on the distance from the inlet before the surfactant effect takes place. The surfactant effect position is sensitive to changes in maximum growth rate, and injection concentrations of bacteria and substrate, thus determining the final recovery. Different methods for incorporating surfactant-induced reduction of interfacial tension into models are investigated. We have suggested one method, where several parameters can be estimated in order to obtain a better fit with experimental data. For all the methods, the incremental recovery is very similar, only coming from small differences in water phase saturation profiles. Overall, a significant incremental oil recovery can be achieved, when the sensitive parameters in the context of MEOR are carefully dealt with.     

The effects of pulsed laser injection seeding and triggering on the temporal behavior and magnitude of laser-induced incandescence from soot

The effect of sub-nanosecond fluence fluctuations and triggering on time-resolved laser-induced incandescence (LII) from soot has been studied using an injection-seeded pulsed Nd:YAG laser that produces a smooth laser temporal profile. Without injection seeding, this multi-mode laser generates pulses with large intensity fluctuations with sub-nanosecond rise times. The experimental results described here demonstrate that at fluences below 0.6 J/cm² LII signals are insensitive to fluence fluctuations on nanosecond time scales. At fluences above 0.6 J/cm² fluctuations in the laser profile cause the rising edge of the LII profile to move around in time relative to the center of the laser pulse causing a broader average profile that shifts to earlier times. Such fluctuations also lead to a decrease in the average LII temporal profile by up to 12% at a fluence of 3.5 J/cm². A timing jitter on the trigger of the data acquisition, such as that produced by triggering on the laser Q-switch synchronization pulse, has a negligible effect on the shape and temporal maximum of the LII signal. Additional jitter, however, considerably reduces the peak of the LII temporal profiles at fluences as low as 0.15 J/cm². Neither fast fluence fluctuations nor trigger jitter have a significant effect on gated LII signals, such as those used to infer soot volume fraction.