An online nano‐LC‐ESI‐FTICR‐MS method for comprehensive characterization of endogenous fragments from amyloid β and amyloid precursor protein in human and cat cerebrospinal fluid

Amyloid precursor protein (APP) is the precursor protein to amyloid β (Aβ), the main constituent of senile plaques in Alzheimer's disease (AD). Endogenous Aβ peptides reflect the APP processing, and greater knowledge of different APP degradation pathways is important to understand the mechanism underlying AD pathology. When one analyzes longer Aβ peptides by low‐energy collision‐induced dissociation tandem mass spectrometry (MS/MS), mainly long b‐fragments are observed, limiting the possibility to determine variations such as amino acid variants or post‐translational modifications (PTMs) within the N‐terminal half of the peptide. However, by using electron capture dissociation (ECD), we obtained a more comprehensive sequence coverage for several APP/Aβ peptide species, thus enabling a deeper characterization of possible variants and PTMs. Abnormal APP/Aβ processing has also been described in the lysosomal storage disease Niemann–Pick type C and the major large animal used for studying this disease is cat. By ECD MS/MS, a substitution of Asp7 → Glu in cat Aβ was identified. Further, sialylated core 1 like O‐glycans at Tyr10, recently discovered in human Aβ (a previously unknown glycosylation type), were identified also in cat cerebrospinal fluid (CSF). It is therefore likely that this unusual type of glycosylation is common for (at least) species belonging to the magnorder Boreoeutheria. We here describe a detailed characterization of endogenous APP/Aβ peptide species in CSF by using an online top‐down MS‐based method. Copyright © 2012 John Wiley & Sons, Ltd.     

Sorption of Pu(VI) onto TiO2

The sorption of Pu(VI) onto TiO(2) was studied as a function of pH (2-10) and Pu concentration (10(-8)-10(-4) M) under an N(2) atmosphere, in 0.016 and 0.1 M NaClO(4). A batch-wise method was used, in which pH was measured in separate experimental containers after removal of a sample to determine the amount of Pu that had been sorbed. As Pu is radioactive, it was used as a tracer and measured by liquid scintillation counting. No ionic strength dependence was discerned, which was taken as an indication of inner sphere complex formation. In the interval of pH 2-7 the system could be described by the formation of two positively charged surface complexes using a 1-pK Stern model. Sorption of the plutonyl ion (PuO(2)(2+)) and the first hydrolysis species (PuO(2)(OH)(+)) was estimated using FITEQL to logK(1)=6.9 and logK(2)=1.4, respectively.     

Impact of concentration self-quenching on the charge generation yield of fullerene based donor-bridge-acceptor compounds in the solid state

A fullerene based Donor-Bridge-Acceptor (DBA) compound, incorporating a π-extended tetrathiafulvalene electron donor, is investigated with respect to its photophysics in solution versus solid state. Solid films of neat DBA are compared with blend films where the DBA compound is diluted in the inert, low dielectric, polymer poly(styrene). It is found that the moderate intermolecular electronic coupling and donor-acceptor separation (22 ?) in this case leads to the generation of more dissociated, intermolecular charges than a mixture of the donor and acceptor reference compounds. However, the increased intermolecular interactions in the solid state lead to the excited state of the fullerene suffering from concentration self-quenching. This is found to severely affect the charge generation yield in solid films. The impact of competing intra and intermolecular interactions in the solid state upon the film photophysics is analysed in terms of a kinetic model which includes both the effects of concentration self-quenching and the impact of film composition upon the dielectric stabilisation of charge separated states. We conclude that both concentration self-quenching and dielectric stabilisation are critical in determining the photophysics of the blend films, and discuss strategies based upon our observations to enhance the charge photogeneration properties of organic films and photovoltaic devices based upon DBA compounds.     

Analysis of proteins from a glioma cell line by using micro-scale solution isoelectric focusing in combination with liquid chromatography/tandem mass spectrometry

In this study we have investigated whether micro-solution isoelectric focusing (microsol-IEF) can be used as a pre-fractionation step prior to liquid chromatography/tandem mass spectrometry (LC/MS/MS) and if extensive sample purification of the different fractions is required. We found that, in spite of the high concentrations of buffer and detergents, no clean up of the digested microsol-IEF fractions was necessary before analysis by LC/MS/MS. We also concluded that it is possible to identify at least twice as many proteins in a glioma cell lysate with the combination of microsol-IEF and LC/MS/MS than with LC/MS/MS alone. Furthermore, most of the proteins that were identified from one microsol-IEF fraction by using analytical narrow-range two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) and peptide mass fingerprinting with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOFMS) were also identified by LC/MS/MS. Finally, we used the combination of microsol-IEF and LC/MS/MS to compare two sample preparation methods for glioma cells and found that several nuclear, mitochondria, and endoplasmic reticulum proteins were only present in the sample that had been subjected to lipid extraction by incubating the homogenized cells in chloroform/methanol/water.     

Deformation behaviour in advanced heat resistant materials during slow strain rate testing at elevated temperature

In this study, slow strain rate tensile testing at elevated temperature is used to evaluate the influence of temperature and strain rate on deformation behaviour in two different austenitic alloys. One austenitic stainless steel (AISI 316L) and one nickel-base alloy (Alloy 617) have been investigated. Scanning electron microscopy related techniques as electron channelling contrast imaging and electron backscattering diffraction have been used to study the damage and fracture micromechanisms. For both alloys the dominante damage micromechanisms are slip bands and planar slip interacting with grain bounderies or precipitates causing strain concentrations. The dominante fracture micromechanism when using a slow strain rate at elevated temperature, is microcracks at grain bounderies due to grain boundery embrittlement caused by precipitates. The decrease in strain rate seems to have a small influence on dynamic strain ageing at 650°C.     

Modeling Unsaturated Flow in Absorbent Swelling Porous Media: Part 1. Theory

The flow and deformation processes in swelling porous media are modeled for absorbent hygiene products (e.g., diapers, wipes, papers etc.). The first part of the article derives the fundamental equations for the hysteretic unsaturated flow, liquid absorption, and large deformation. The final set of model equations consists of balance equations of mobile and absorbed (immobile) liquid combined with a series of constitutive relationships. The resulting equation system is strongly nonlinear and requires advanced numerical strategies for solving. The second part of the article focuses on numerical solution and presents simulation results for 2D and 3D applications.     

Non-existence of a minimizer to the magnetic Hartree-Fock functional

In the presence of an external magnetic field, we prove absence of a ground state within the Hartree-Fock theory of atoms and molecules. The result is established for a wide class of magnetic fields when the number of electrons is greater than or equal to 2Z + K, where Z is the total charge of K nuclei. Positivity properties are instrumental in the proof of this bound for the maximal ionization.      

Dynamics of spin-1/2 quantum plasmas

The fully nonlinear governing equations for spin-1/2 quantum plasmas are presented. Starting from the Pauli equation, the relevant plasma equations are derived, and it is shown that nontrivial quantum spin couplings arise, enabling studies of the combined collective and spin dynamics. The linear response of the quantum plasma in an electron-ion system is obtained and analyzed. Applications of the theory to solid state and astrophysical systems as well as dusty plasmas are pointed out.