Synthetic DNA and Biology (Nobel Lecture)

Most of the significant work has been summarized in a number of reviews and articles. In these there was, of necessity, a good deal of simplification and omission of detail…. With the passage of time, even I find myself accepting such simplified accounts. F Sanger^[1]     

Pure adaptive search in global optimization

Pure adaptive seach iteratively constructs a sequence of interior points uniformly distributed within the corresponding sequence of nested improving regions of the feasible space. That is, at any iteration, the next point in the sequence is uniformly distributed over the region of feasible space containing all points that are strictly superior in value to the previous points in the sequence. The complexity of this algorithm is measured by the expected number of iterations required to achieve a given accuracy of solution. We show that for global mathematical programs satisfying the Lipschitz condition, its complexity increases at mostlinearly in the dimension of the problem.This work was supported in part by NATO grant 0119/89.     

The electron current to a Langmuir probe in a flowing high-pressureplasma

The electron current to a Langmuir probe in a moving high-pressure plasma has been measured and analyzed. The plasma is an atmospheric-pressure propane flame, and the probe's speed relative to the plasma was varied from 10 ms^-1 to 30 ms^-1. The current is linearly dependent on the speed and appears to be comprised of two components-one driven by diffusion and the other by convection. A model is devised which can be used to measure the electron density. By comparing the density computed from this model to that measured from the ion current, it has been possible to measure the electron mobility in the flame gases. The value obtained by the authors is in good agreement with theoretical calculations found in the literature     

Underbody and ground effects on rotating disc flow: a global scale inviscid study

The flow induced by a finite disc rotating near horizontal ground is considered, including the effects of an underbody. This paper concentrates on determining the shape of the free layer beyond the rim of the disc which is horizontal in the absence of the underbody and ground but forced to deform to ensure that conditions across the layer are satisfied when the underbody or ground is added. The far-field behaviour, the inviscid flow produced by a nominally infinite disc near the ground and the global solution for small ground clearances are considered analytically, and the full problem is posed as an integral problem. This is then solved numerically and analytically. Results are presented for various heights of the disc above the ground and for discs with an axisymmetric underbody present. A universal form is found for the farfield shape (which is controlled by entrainment into the free layer) but both the underbody and the ground effects are found to increase very significantly for reduced clearances.     

Predicting the onset of DNA supercoiling using a non-linear hemitropic elastic rod

Elastic rod models provide a means to interpret single molecule DNA experiments as well as predict DNA behavior under physiological conditions. Here we use an elastic rod model to predict the stability boundary (critical torque vs. applied tension) for single molecule DNA experiments in which the molecule is subjected to applied tension and twist. We discuss the shortcomings of the usual isotropic rod model. We then derive a consistent non-linear material law from the general representation for a hemitropic (chiral) rod. Finally, we present results of a standard bifurcation analysis predicting the stability boundary. We find results from the non-linear hemitropic rod to match the data closely.     

On subgroups of finite index in compact Hausdorff groups

Let G be a compact Hausdorff group and n a positive integer. It is proved that all subnormal subgroups of G of index dividing n are open if and only if there are only finitely many such subgroups, and that all subgroups of finite index in G are open if and only if there are only countably many such subgroups.     

Synthesis of all diastereomeric methyl 2,5-anhydro-3-deoxy-hexonates: precursors to C-2-deoxynucleosides and THF-templated γ- and δ-amino acids

Efficient syntheses of all diastereomers of methyl 2,5-anhydro-3-deoxy-hexonate from mannono- or gulono-lactones provide precursors for C-nucleosides of 2-deoxyribose and for THF-templated γ- and δ-amino acids.