Modern Synthetic Methods for Fluorine‐Substituted Target Molecules

Fluorine has come to be recognized as a key element in materials science: in heat‐transfer agents, liquid crystals, dyes, surfactants, plastics, elastomers, membranes, and other materials. Furthermore, many fluorine‐containing biologically active agents are finding applications as pharmaceuticals and agrochemicals. Progress in synthetic fluorine chemistry has been critical to the development of these fields and has led to the invention of many novel fluorinated molecules as future drugs and materials. As a result of the electronic effects of fluorine substituents, fluorinated substrates and reagents often exhibit unusual and unique chemical properties, which often make them incompatible with established synthetic methods. Thus, the problem of how to control the unusual properties of compounds with fluorine substituents deserves much attention, so as to promote the design of facile, efficient, and environmentally benign methods for the synthesis of valuable organofluorine targets.     

Modern synthetic methods for fluorine-substituted target molecules

Fluorine has come to be recognized as a key element in materials science: in heat-transfer agents, liquid crystals, dyes, surfactants, plastics, elastomers, membranes, and other materials. Furthermore, many fluorine-containing biologically active agents are finding applications as pharmaceuticals and agrochemicals. Progress in synthetic fluorine chemistry has been critical to the development of these fields and has led to the invention of many novel fluorinated molecules as future drugs and materials. As a result of the electronic effects of fluorine substituents, fluorinated substrates and reagents often exhibit unusual and unique chemical properties, which often make them incompatible with established synthetic methods. Thus, the problem of how to control the unusual properties of compounds with fluorine substituents deserves much attention, so as to promote the design of facile, efficient, and environmentally benign methods for the synthesis of valuable organofluorine targets.     

Synthesis of 4,6-disubstituted 2-methylpyridines and their 3-carboxamides

A new one-pot synthesis of title compounds by the reactions of α,β-unsaturated carbonyl compounds with β-aminocrotononitrile in the presence of sodium hydroxide is described.     

Synthesis of thromboxane A2 analog DL-(9,11), (11,12)-dideoxa-(9,11)-epithio-(11,12)-methylene-thromboxane A2

A synthesis of the thromboxane A₂ analog, $\text{dl}$-(9,11), (11,12)-dideoxa-(9,11)-epithio-(11,12)-methylene-thromboxane A₂ is described.     

Fluorogenic probes for detecting deacylase and demethylase activity towards post-translationally-modified lysine residues

Reversible enzymatic post-translational modification of the ε-amino groups of lysine residues (e.g. N-acylation reactions) plays an important role in regulating the cellular activities of numerous proteins. This study describes how enzyme catalyzed N-deprotection of lysine residues of non-fluorescent peptide-coumarin probes can be used to generate N-deprotected peptides that undergo spontaneous O- to N-ester transfer reactions (uncatalyzed) to generate a highly fluorescent N-carbamoyl peptide. This enables detection of enzyme catalyzed N-deacetylation, N-demalonylation, N-desuccinylation and N-demethylation reactions activities towards the N-modified lysine residues of these probes using simple ‘turn on’ fluorescent assays.

We developed “turn-on” fluorescent probes that detect enzymatic lysine deacylation and demethylation critical for epigenetic and other cellular phenomena, using intramolecular O- to N-ester transfer reactions.     

The crystal structures of α- and β-CdUO4

The structural parameters of α- and β-CdUO₄ crystals are determined by X-ray powder diffraction technique. α-CdUO₄ is rhombohedral and cell parameters are a = 6.233(3) Å and α = 36.12(5)°. β-CdUO₄ crystallizes in a C-centered orthorhombic cell with a = 7.023(4), b = 6.849(3), c = 3.514 (2) Å. The space groups are $\text{R}\text{3}\text{m}$ for α-CdUO₄ and Cmmm for β-CdUO₄. α-CdUO₄: 1U in (000), 1Cd in ($\text{1}\text{2}\text{1}\text{2}\text{1}\text{2}$), 2O(1) in ±(uuu), 2O(2) in ±(vvv); u = 0.113, v = 0.350, Z = 1. β-CdUO₄: 2U in ($\text{000;}\text{1}\text{2}\text{1}\text{2}\text{0}$), 2Cd in ($\text{1}\text{2}\text{0}\text{1}\text{2}\text{; 0}\text{1}\text{2}\text{,}\text{1}\text{2}$), 4O(1) in ($\text{0, ±y, 0;}\text{1}\text{2}\text{,}\text{1}\text{2}\text{±y, 0}$), 4O(2) in ($\text{±x, 0,}\text{1}\text{2}\text{;}\text{1}\text{2}\text{±x,}\text{1}\text{2}\text{,}\text{1}\text{2}$); x = 0.159, y = 0.278, Z = 2. β-CdUO₄ contains collinear uranyl UO²⁺₂ groups with a UO(1) distance of 1.91 Å, located either along or parallel to the c axis whereas the UO(1) bond length in α-CdUO₄ is 1.98 Å which is longer than the usual uranyl bond length.     

Vortex shedding from a ring in shear flow

Vortex shedding from a bluff ring in a linear shear flow has been investigated experimentally. The shedding frequency, measured using a hot wire in various positions within the near wake of the ring, was found to be remarkably insensitive to a mean flow shear parameter, , defined by (d/U _o).U/y, where d is the mean ring diameter and U _o is the undisturbed upstream velocity on the ring axis; even for = 0.41, corresponding to a velocity variation of about ±24% across the outer ring diameter, the Strouhal number was only about 5% lower than in uniform flow. However, the strong axisymmetric shedding which dominates the flow for = 0 is significantly affected by shear. Indeed, spatial correlation measurements demonstrated that the shedding actually becomes anti-symmetric at the highest values of . The implication of these results is that vortex flowmeters constructed using a ring as the shedding body would be relatively unaffected by changes in the upstream mean flow profile.     

Ageladine A: an antiangiogenic matrixmetalloproteinase inhibitor from the marine sponge Agelas nakamurai

A novel MMP inhibitor, ageladine A (1) with antiangiogenic activity was isolated from a marine sponge Agelas nakamurai. Structure 1 was determined by a combination of spectroscopic and chemical methods to be an unprecedented structure of 4-(4,5-dibromo-1H-pyrrol-2-yl)]-1H-imidazo[4,5-c]pyridin-2-amine.     

Concise synthesis of pyrrolophenanthridine alkaloids using a Pd-mediated biaryl coupling reaction with regioselective C-H activation via the intramolecular coordination of the amine to Pd

The concise synthesis of Amaryllidaceae alkaloids, such as anhydrolycorinone, anhydrolycorin-7-one, assoanine, and oxoassoanine, which have a pyrrolophenanthridine skeleton, was achieved in moderate yield using the Pd-mediated biaryl coupling reaction of 1-(2-halobenzyl)-2,3-dihydroindole, which applied the regioselective C-H activation method with intramolecular coordination of the benzylamino group to Pd.