Structure determination of a membrane protein in proteoliposomes

An NMR method for determining the three-dimensional structures of membrane proteins in proteoliposomes is demonstrated by determining the structure of MerFt, the 60-residue helix-loop-helix integral membrane core of the 81-residue mercury transporter MerF. The method merges elements of oriented sample (OS) solid-state NMR and magic angle spinning (MAS) solid-state NMR techniques to measure orientation restraints relative to a single external axis (the bilayer normal) from individual residues in a uniformly (13)C/(15)N labeled protein in unoriented liquid crystalline phospholipid bilayers. The method relies on the fast (>10(5) Hz) rotational diffusion of membrane proteins in bilayers to average the static chemical shift anisotropy and heteronuclear dipole-dipole coupling powder patterns to axially symmetric powder patterns with reduced frequency spans. The frequency associated with the parallel edge of such motionally averaged powder patterns is exactly the same as that measured from the single line resonance in the spectrum of a stationary sample that is macroscopically aligned parallel to the direction of the applied magnetic field. All data are collected on unoriented samples undergoing MAS. Averaging of the homonuclear (13)C/(13)C dipolar couplings, by MAS of the sample, enables the use of uniformly (13)C/(15)N labeled proteins, which provides enhanced sensitivity through direct (13)C detection as well as the use of multidimensional MAS solid-state NMR methods for resolving and assigning resonances. The unique feature of this method is the measurement of orientation restraints that enable the protein structure and orientation to be determined in unoriented proteoliposomes.     

Temperature and potential-dependent structural changes in a Pt cathode electrocatalyst viewed by in situ XAFS

The paper presents an X-ray absorption fine structure (XAFS) investigation of Pt supported on Vulcan XC-72 operating as a cathode catalyst in a polymer electrolyte membrane fuel cell (PEM FC). XAFS spectroscopy was performed in situ using a cell developed by the authors and optimized for absorption measurements. Low-noise spectra were obtained using the transmission mode over the Pt L₃ XAFS range, enabling multiple-scattering XAFS data-analysis for the Pt nanocrystalline system under operating conditions. Accurate measurements of the local structure were performed at various potentials and working temperatures. Changes in the near-edge structures reflecting variations in the Pt electronic structure were observed for various potential values in the cathode activation region. The Pt average local geometric structure was found to be practically potential-independent. The increase in structural disorder caused by the higher working FC temperature was not found to affect the catalyst’s performance in the kinetically controlled region.     

Dipolar waves map the structure and topology of helices in membrane proteins

Dipolar waves describe the structure and topology of helices in membrane proteins. The fit of sinusoids with the 3.6 residues per turn period of ideal alpha-helices to experimental measurements of dipolar couplings as a function of residue number makes it possible to simultaneously identify the residues in the helices, detect kinks or curvature in the helices, and determine the absolute rotations and orientations of helices in completely aligned bilayer samples and relative rotations and orientations of helices in a common molecular frame in weakly aligned micelle samples. Since as much as 80% of the structured residues in a membrane protein are in helices, the analysis of dipolar waves provides a significant step toward structure determination of helical membrane proteins by NMR spectroscopy.     

An electrochemical impedance spectroscopic study of the transport properties of LiNi0.75Co0.25O2

Analysis of impedance spectra taken at closely spaced bias potential values on Li_xNi_0.75Co_0.25O₂ have been interpreted in terms of electronic and ionic transport properties of this electrode material. In the 0.9<x<1 range the material shows semi-conductive properties and the electronic conductivity dominates the transport. For x≤0.9, the properties change into those of a metal-like material in which the ionic conductivity becomes the limiting factor. The transition between these two limiting conditions clearly appears in the impedance spectra sequence. This transition is reversible since the same behaviour is observed during the lithium intercalation process as well as in the reverse lithium deintercalation process.     

Non-local symmetries of first-order equations

It is shown how one can transform scalar first-order ordinarydifferential equations which admit non-local symmetries of theexponential type to integrable equations admitting canonicalexponential non-local symmetries. As examples we invoke theAbel equation of the second kind, the Riccati equation and naturalgeneralizations of these. Moreover, our method describes howa double reduction of order for a second-order ordinary differentialequation which admits a two-dimensional Lie algebra of generatorsof point symmetries can be affected if the second-order equationis first reduced in order once by a symmetry which does notspan an ideal of the two-dimensional Lie algebra.     

Hydration-optimized oriented phospholipid bilayer samples for solid-state NMR structural studies of membrane proteins

The preparation of oriented, hydration-optimized lipid bilayer samples, for NMR structure determination of membrane proteins, is described. The samples consist of planar phospholipid bilayers, containing membrane proteins, that are oriented on single pairs of glass slides, and are placed in the coil of the NMR probe with the bilayer plane perpendicular to the direction of the magnetic field. Lipid bilayers provide a medium that closely resembles the biological membrane, and sample orientation both preserves the intrinsic membrane-defined directional quality of membrane proteins, and provides the mechanism for resonance line narrowing. The hydration-optimized samples overcome some of the difficulties associated with multi-dimensional, high-resolution, solid-state NMR spectroscopy of membrane proteins. These samples have greater stability over the course of multi-dimensional NMR experiments, they have lower sample conductance for greater rf power efficiency, and enable greater rf coil filling factors to be obtained for improved experimental sensitivity. Sample preparation is illustrated for the membrane protein CHIF (channel inducing factor), a member of the FXYD family of ion transport regulators.     

Performance of a fuel cell optimized for in situ X‐ray absorption experiments

A commercial fuel cell has been successfully modified to carry out X‐ray absorption spectroscopy (XAS) measurements under optimized in operando conditions. The design is conceived for the performance of XAS experiments in transmission mode over a wide range of X‐ray energies above 6 keV, owing to the reduced absorption of the cell. The wide angular aperture allows the collection of XAS in fluorescence mode and of X‐ray diffraction patterns when needed. Details of the design of the cell and its performances are given. The quality of the extended X‐ray absorption fine‐structure spectra under working conditions has been verified at the ESRF and ELETTRA synchrotron radiation facilities, showing that relatively fast and low‐noise transmission measurements on electrodes over a wide range of catalyst concentrations and energies are feasible.