The PLAC1-homology region of the ZP domain is sufficient for protein polymerisation

Background  

Hundreds of extracellular proteins polymerise into filaments and matrices by using zona pellucida (ZP) domains. ZP domain proteins perform highly diverse functions, ranging from structural to receptorial, and mutations in their genes are responsible for a number of severe human diseases. Recently, PLAC1, Oosp1-3, Papillote and CG16798 proteins were identified that share sequence homology with the N-terminal half of the ZP domain (ZP-N), but not with its C-terminal half (ZP-C). The functional significance of this partial conservation is unknown.     

Conservative restoration of the Augustus Arch of Fano: cleaning methodology as derived from preparatory analyses and sampling

The original appearance of Augustus Arch of Fano was compromised by a diffuse distribution of black scales and other deposits. In order to preserve the stone surface the restoration intervention operated with different cleaning techniques so that it was possible to use every method with a properly and not dangerous intensity. In particular it showed the possibility to use laser cleaning to destroy the external hard part of black scales, and complete the intervention with light chemical cleaning. In the case of Augustus Arch this way resulted useful for preserve signs on surface and cleaning every kind of deposits at the same time. Every intervention on such an important monument need to obtain at the same time the best result for materials conservation and the aim of image restore.     

M(R-dmet)2] bis(1,2-dithiolenes): a promising new class intermediate between [M(dmit)2] and [M(R,R'-timdt)2] (M = Ni, Pd, Pt)

We report the first examples of metal dithiolenes belonging to the class [M(R-dmet)(2)] [R-dmet = formally monoreduced N-substituted thiazolidine-2,4,5-trithione; R = Et, M = Ni (1), Pd (2), Pt (3)]. A comparative spectroscopic, electrochemical, and density functional theory theoretical investigation indicates that [M(R-dmet)(2)] complexes show features intermediate between those of the dithiolenes belonging to the previously reported classes [M(R,R'-timdt)(2)] and [M(dmit)(2)] (R,R'-timdt = formally monoreduced N,N'-disubstituted imidazolidine-2,4,5-trithione; dmit = 2-thioxo-1,3-dithiole-4,5-dithiolato). UV-vis-near-IR spectroscopy and cyclic voltammetry/differential pulsed voltammetry measurements performed on 1 and 3 proved that the new dithiolenes are stable as neutral, monoanionic, and bianionic species and feature a near-IR electrochromic absorption falling at about 1000 and 1250 nm for neutral and monoanionic species, respectively.     

Critical re-evaluation of the O-H bond dissociation enthalpy in phenol

The gas-phase O-H bond dissociation enthalpy, BDE, in phenol provides an essential benchmark for calibrating the O-H BDEs of other phenols, data which aids our understanding of the reactivities of phenols, such as their relevant antioxidant activities. In a recent review, the O-H BDE for phenol was presented as 90 +/- 3 kcal mol(-1) (Acc. Chem. Res. 2003, 36, 255-263). Due to the large margin of error, such a parameter cannot be used for dynamic interpretations nor can it be used as an anchor point in the development of more advanced computational models. We have reevaluated the existing experimental gas-phase data (thermolyses and ion chemistry). The large errors and variations in thermodynamic parameters associated with the gas-phase ion chemistry methods produce inconsistent results, but the thermolytic data has afforded a value of 87.0 +/- 0.5 kcal mol(-1). Next, the effect of solvent has been carefully scrutinized in four liquid-phase methods for measuring the O-H BDE in phenol: photoacoustic calorimetry, one-electron potential measurements, an electrochemical cycle, and radical equilibrium electron paramagnetic resonance (REqEPR). The enthalpic effect due to solvation, by, e.g., water, could be rigorously accounted for by means of an empirical model and the difference in hydrogen bond interactions of the solvent with phenol and the phenoxyl radical. For the REqEPR method, a second correction is required since the calibration standard, the O-H BDE in 2,4,6-tri-tert-butylphenol, had to be revised. From the gas-phase thermolysis data and three liquid-phase techniques (excluding the electrochemical cycle method), the present analysis yields a gas-phase BDE of 86.7 +/- 0.7 kcal mol(-1). The O-H BDE was also estimated by state-of-the-art computational approaches (G3, CBS-APNO, and CBS-QB3) providing a range from 86.4 to 87.7 kcal mol(-1). We therefore recommend that in the future, and until further refinement is possible, the gas-phase O-H BDE in phenol should be presented as 86.7 +/- 0.7 kcal mol(-1).     

Copper-assisted oxidation of catechols into quinone derivatives

Catechols are ubiquitous substances often acting as antioxidants, thus of importance in a variety of biological processes. The Fenton and Haber–Weiss processes are thought to transform these molecules into aggressive reactive oxygen species (ROS), a source of oxidative stress and possibly inducing degenerative diseases. Here, using model conditions (ultrahigh vacuum and single crystals), we unveil another process capable of converting catechols into ROSs, namely an intramolecular redox reaction catalysed by a Cu surface. We focus on a tri-catechol, the hexahydroxytriphenylene molecule, and show that this antioxidant is thereby transformed into a semiquinone, as an intermediate product, and then into an even stronger oxidant, a quinone, as final product. We argue that the transformations occur via two intramolecular redox reactions: since the Cu surface cannot oxidise the molecules, the starting catechol and the semiquinone forms each are, at the same time, self-oxidised and self-reduced. Thanks to these reactions, the quinone and semiquinone are able to interact with the substrate by readily accepting electrons donated by the substrate. Our combined experimental surface science and ab initio analysis highlights the key role played by metal nanoparticles in the development of degenerative diseases.

An antioxidant catechol transforms following intramolecular redox reactions into highly reactive oxygen species, a semiquinone and a quinone, on copper.     

Highly selective entry to the azadirachtin skeleton via a Claisen rearrangement/radical cyclization sequence

[formula: see text] A highly diastereoselective, microwave-induced Claisen rearrangement of an appropriately substituted propargylic enol ether allows the formation of the sterically congested C8-C14 bond of azadirachtin. When combined with a radical-mediated cyclization of the corresponding allene, this sequence offers rapid entry to the framework of azadirachtin.     

Functionalization of montmorillonite by acrylamide polymers containing side-chain ammonium cations

Stable polyacrylamide (polyAA)–montmorillonite adducts were prepared by two distinct processes: (1) free radical copolymerization of AA with alkaline clay previously treated with 2-(N-methyl-N,N-diethyl ammonium iodide)ethylacrylate (QD1) and (2) direct interactions of alkaline montmorillonite with various preformed copolymers of AA with QD1. The structure of the adducts as determined by Fourier transform infrared spectroscopy, thermogravimetric analysis, differential scanning calorimetry and X-ray diffraction was shown to consist of AA macromolecules inserted between lamellar layers whose spacing was larger than in the polymer-free clay. The polymer was strongly attached to the inorganic surfaces, probably due to cooperative formation of electrostatic bonding. The thermal stability of the organic polymers in the resulting complexes was substantially enhanced while the mobility of macromolecules decreased.     

Dual-flame photometric detector (DFPD) for the simultaneous G. C. determination of P-, S-, Cl-containing organic compounds

Summary The construction and set-up of a dual-flame photometric detector (DFPD) which, through three channel operation, allows the simulatneous selective determination of P-, S-, Cl-containing compounds eluted from a G. C. column is described. For P- and S-containing compounds the molecular emission bands HPO and S₂ at 526 and 394 nm respectively are measured; for Cl-containing compounds, after reaction with In, the InCl band at 360 nm is recorded. Detectability, specificity, linearity as well as mutual interferences are discussed and compared with those of classical GC-detectors as thermionic (TID) and electron capture (ECD). Some practical applications concerning the pesticide residue analysis in animal and vegetable extracts are shown.

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Zwei-Flammen-Photometer-Detektor (DFPD) für die gleichzeitige G. C. Bestimmung von P-, S-und Cl-enthaltenden organischen Verbindungen

Zusammenfassung Der Aufbau und die Justierung eines Zwei-Flammen-Photometer-Detektors, welcher durch 3-Kanal Arbeitsweise eine gleichzeitige selektive Bestimmung von P-, S- und Cl-enthaltenden Verbindungen erlaubt, wird beschrieben. Für P- und S-enthaltende Moleküle werden die Molekül-Linien HPO und S₂ bei 526 bzw. 394 nm gemessen; bei Cl-enthaltenden Verbindungen wird, nach Reaktion mit In, die InCl-Linie bei 360 nm registriert. Nachweisgrenze, Spezifität, Linearität sowie Quereinflüsse wechselseitiger Interferenzen werden diskutiert und mit den entsprechenden Werten klassischer GC-Detektoren wie TID und ECD verglichen. Einige praktische Anwendungen bei der Pestizid-Rückstand-Analyse in Extrakten von Tieren und Pflanzen werden gezeigt.

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Détecteur photométrique à double flamme (DPDF) pour la détermination simultantée des composés organiques contenant du P, S, Cl en CG

Résumé On décrit la construction et la mise au point d'undétecteur photométrique à double flamme («DFPD»=DPDF); celui-ci permet grâce à système à «3 canaux» de déterminersimultanément et sélectivement les substances organiques contenant du P, du S, du Cl, à la sortie des colonnes de chromatographie en phase gazeuse. Pour les substances contenant du P et du S, on mesure l'émission moléculaire correspondant aux bandes dûes à HPO et S₂ (526 et 394 nm. respectivement); pour les composés chlorés, on mesure l'émission correspondant à la bande due à InCl (360 nm.) après réaction avec l'Indium des gaz brulés. Les problèmes relatifs à la limite de détection, à la specificité et à la linéarité de la réponse en fonction de la quantité de substance injectée, ainsi qu'aux interactions entre substances détectées, sont discutés et les rultats obtenus sont compar avec ceux fournis par les détecteurs classiques: thermo-ionique («TID»=DTI) ou à capture d'électrons («ECD»=DCE). Quelques applications pratiques dans le domaine de l'analyse des résidus de pesticides dans des extraits d'origine animale ou végétale sont données comme exemples.

     

Polycyclic aromatic hydrocarbons in the atmosphere: monitoring, sources, sinks and fate. II: Sinks and fate

This paper reviews the transformation processes that polycyclic aromatic hydrocarbons (PAHs) undergo in the atmosphere. These processes can take place both in the gas phase and in the particulate/aerosol one. Among the gas-phase processes, the most important ones are the daytime reaction with *OH and the nighttime reaction with *NO3. The relative importance of the two processes depends on the particular PAH molecule. For instance, gaseous naphthalene is mainly removed from the atmosphere upon reaction with *OH, while gaseous phenanthrene is mainly removed by reaction with *NO3. Oxy-, hydroxy-, and nitro-PAHs are the main transformation intermediates. Reaction with ozone and photolysis play a secondary role in the transformation of gaseous PAHs. The particle-associated processes are usually slower than the gas-phase ones, thus the gas-phase PAHs usually have shorter atmospheric lifetimes than those found on particulate. Due to the higher residence time on particulate when compared with the gas phase, direct or assisted photolysis plays a relevant role in the transformation of particle-associated PAHs. Among the other processes taking place in the condensed phase, nitration plays a very important role due to the health impact of nitro-PAHs, some of them being the most powerful mutagens found so far in atmospheric particulate extracts.     

Synthesis and coordination properties of new macrocyclic ligands: equilibrium studies and crystal structures

The synthesis and characterization of two new macrocyclic ligands, the bis-macrocyclic compound 2,6-bis(1,4,13-triaza-7,10-dioxacyclopentadec-1-ylmethyl)phenol (L) and 38-methoxy-1,4,13,16,19,28-hexaaza-7,10,22,25-tetraoxatricyclo[14.14.7.1(32,36)]octatriconta-32,34,Delta(36,38)-triene (L1) are reported. Equilibrium studies of basicity and coordination properties toward metal ions such as Cu(II), Zn(II), Cd(II) and Pb(II) were performed for ligand by potentiometric measurements in aqueous solution (298.1 +/- 0.1 K, I= 0.15 mol dm(-3)). L behaves as a hexaprotic base (logK(1)= 10.93, logK(2)= 9.70, logK(3)= 8.79, logK(4)= 8.05, logK(5)= 6.83, logK(6)= 2.55). All metal ions form stable mono- and dinuclear complexes: logK(MLH(-1))= 25.61 for Cu(II), 15.37 for Zn(II), 12.58 for Cd(II) and 13.79 for Pb(II); logK(M(2)LH(-1))= 31.61 for Cu(II), 23.38 for Zn(II), 24.49 for Cd(II) and 23.68 for Pb(II). All these dinuclear species show a great tendency to add the OH(-) group: the equilibrium constant for the addition reaction was found to be logK(M(2)LH(-1)OH)= 4.77 for Cu(II), 5.66 for Zn(II), 2.8 for Cd(II) and 3.18 for Pb(II). In the case of Ni(II), kinetic inertness prevents the possibility of solution studies. The dinuclear solid adducts [Ni(2)H(-1)L(N(3))(3)].EtOH and [Cu(2)H(-1)L(N(3))](ClO(4))(2) were characterized by X-ray analysis.