Control of lysine reactivity in four-helix bundle proteins by site-selective pKa depression: expanding the versatility of proteins by postsynthetic functionalization

Five 42-residue polypeptides have been designed to fold into hairpin helix-loop-helix motifs that dimerize to form four-helix bundles, and to serve as protein scaffolds for the elucidation at the molecular level of the principles that control and fine-tune lysine and ornithine reactivities in a protein context. Site-selective control of Lys and Orn reactivity provides a mechanism for addressing directly individual residues and is a prerequisite for the site-selective functionalization of folded proteins. Several lysine and one ornithine residues were introduced on the surface and in the hydrophobic core of the folded motif. The reactivity of each residue was determined by measuring the degree of acylation of the trypsin cleaved fragments by HPLC and mass spectrometry. The most reactive residues were Orn34 and Lys19, both of which were located in d positions in the heptad repeat, and therefore in hydrophobic environments. Upon reaction of the helix-loop-helix dimer KA-I with one equivalent of mono-p-nitrophenyl fumarate, Orn34 was acylated approximately three times more efficiently than Lys19, whereas Lys10 (b position), Lys15 (g position), and Lys33 (c position) remained unmodified. In the sequence KA-I-A(15) Lys15 was replaced by an alanine residue and the selectivity of Orn34 over Lys19 increased to approximately a factor of six, probably because Lys15 had the capacity to reduce the pK(a) value of Lys19 and 85 % of site-selectively monoacylated product was obtained. The pH dependence of the acylation reaction was determined and showed that the pK(a) of the reactive residues were 9.3, more than a pK(a) unit below the magnitude of the corresponding residue in a solvent exposed position. Introducing Lys and Orn residues into a or d positions of the heptad repeat therefore serves as a mechanism of depressing their pK(a) to increase their reactivity site selectively. Extensive NMR and CD spectroscopic analyses showed that the sequences fold according to prediction.     

Potentiometric and antimicrobial studies on the asymmetric Schiff bases and their binuclear Ni(II) and Fe(III) complexes; synthesis and characterization of the complexes

The protonation constants of two nitro-Schiff bases SB¹, SB² and three asymmetric tetradentate diimines H₂L¹, H₂L² and H₂L³ and the stability constants of their ML type binuclear Ni(II) and Fe(III) complexes have been determined potentiometrically. The asymmetric diimines are (2OH) RCHNC₆H₄CHNR′ (2OH) type compounds [where R = R′ = phenyl for H₂L¹; R = naphthyl, R′ = phenyl for H₂L² and R = R′ = naphthyl for H₂L³]. The effect of tautomeric forms on the acid-base properties of the diimines has been investigated and discussed. In addition, dimeric and binuclear Ni(II) and Fe(III) complexes of the diimines have been synthesized and characterized by physical and spectroscopic techniques. Also, in vitro antimicrobial activities of the diimines and the complexes have been evaluated against three bacteria: Micrococcus luteus (NRLL B-4375), Bacillus cereus (RSKK 863), Escherichia coli (ATCC 11230) and the fungus: Candida albicans (ATCC 10239).     

Adsorption from binary solvent mixtures onto silica gel by HPLC frontal analysis

Summary The chromatographic technique of frontal analysis is applied to measuring adsorption from binary liquid mixtures by silica gel. The complete adsorption isotherm of a solvent mixture is obtained by measuring the break-through curves for a series of small concentration steps of the mobile phase. This method offers a direct way to determine the composition of the stationary phase in liquid-solid chromatography with mixed mobile phases. The surface excess isotherms of all binary systems formed by benzene, cyclohexane, and 1,2-dichloroethane, at the solution-silica gel interface at 25 °C are presented. The data of the three systems are shown to be thermodynamically mutually consistent.     

Determination of uranium and thorium in Eskişehir-Beylikahir ore samples by delayed neutron counting technique

The Eskiehir-Beylikahir district has the largest and richest thorium and rare earth elements deposits in Turkey. The uranium and thorium concentrations of samples taken from four different parts of this area have been determined by the delayed neutron counting technique. The results are compared with those of previous analyses by other techniques and found to be in good agreement.     

Phenylated polyimides via bifunctional monomers

The synthesis of two phenylated bifunctional monomers, dimethyl 4-(4-(p-aminophenoxy)phenyl)-3,5,6-triphenylphthalate and dimethyl 4-(4-(4-(p-aminophenoxy)phenoxy)phenyl)-3,5,6-triphenylphthlate, was accomplished. Polymerization in solution or by a bulk polymerization procedure yielded a series of low molecular weight phenylated polyimides. The polymers were soluble in chlorinated hydrocarbons and exhibited thermal stabilities comparable to other polyimide systems.     

Selective LC Determination of Cabergoline in the Bulk Drug and in Tablets: In Vitro Dissolution Studies

Cabergoline (CAB) is an ergot alkaloid derivative with dopamine agonist activity. A novel, simple, and rapid stability-indicating high-performance liquid chromatographic (HPLC) method for assay of CAB in tablets has been developed and validated. Chromatography was performed on a 4.6 mm i.d. × 250 mm, 5 μm particle, cyano column with acetonitrile–10 mM phosphoric acid, 35:65 (v/v), containing 0.04% triethylamine, as mobile phase, at a flow rate of 1.0 mL min^?1, and UV detection at 280 nm. Response was a linear function of concentration in the range 0.1–4 μg mL^?1 (r ² = 0.9999). The recovery of the method was good (99.45%) and RSD values for intra-day and inter-day precision were 0.24–0.88% and 0.66–1.19%, respectively. The method can be used for quality-control assay of CAB in tablets, for stability studies, and for in vitro dissolution studies.     

Development of a solid-phase extraction and derivatization method for polar carboxylic acids from aqueous extracts of inorganic multi-component incineration residues

A rapid and reliable GC/MS (EI and CI) method was developed for the identification of short-chain mono- and dicarboxylic acids in complex and strongly alkaline residues of municipal waste incineration. Such residues contain organic carboxylic acids in the mg/kg to μg/kg range, which may contribute to the mobilization of heavy metals. However, the alkalinity and the high salt loads of the matrix were found to be a serious problem in the analysis of short chain acids. Extraction with water, solid phase extraction, and derivatization were studied under these conditions. Solid-phase extraction with polymeric sorbents and derivatization with diazomethane can be combined in a reproducible manner to yield a robust and simple method which can be applied for screening unknown solids due to its wide applicability and the well identifiable methyl esters. Absolute recovery rates varied between 20 and 85% depending on the individual acids. Received: 13 November 1997 / Revised: 17 February 1998 / Accepted: 18 February 1998     

The Effect of a Cationic Polyelectrolyte on the Forces between Two Cellulose Surfaces and between One Cellulose and One Mineral Surface

The effect of a cationic polyelectrolyte, PCMA, on the forces between two cellulose surfaces and between one cellulose surface and one mica surface has been studied using the interferometric surface force apparatus (SFA). The cellulose surfaces were prepared by Langmuir-Blodgett deposition of trimethylsilyl cellulose onto hydrophobized mica. Prior to measurements the surfaces were desilylated to obtain pure cellulose. Introduction of a cationic polyelectrolyte into the solution drastically changed the interactions between the cellulose layers. It was found that the cationic polyelectrolyte does adsorb onto the cellulose surface, although the adsorbed amount is low. The adsorbed layer is very thin, as expected at a low electrolyte concentration. Before the adsorption has reached equilibrium, when only some polyelectrolyte had adsorbed, the adhesion between the surfaces was high, and it was noted that the cellulose layer was damaged on separation. After a longer adsorption time an electrostatic repulsion and no adhesion were observed between the polyelectrolyte-coated cellulose surfaces. An electrostatic repulsion was observed between cellulose and mica. When cationic polyelectrolyte was introduced to the system it overcompensated the charges on both surfaces, and the range and magnitude of the double-layer force was higher than without polyelectrolyte. The relevance of the results to flocculation mechanism and efficiency in cellulose systems is discussed. Copyright 2000 Academic Press.     

Übergangsmetall—methylen-komplexe : XXXI. Primärkomplexierung von diazoalkanen an metall—metall-mehrfachbindungen; ein weiterer koordinationstyp

An unexpected novel coordination mode of diazoalkanes has been verified via addition of 2-diazopropane to the metal—metal triple bond of bis[dicarbonyl(η⁵-pentamethylcyclopentadienyl)molybdenum] (MoMo). The dinuclear 1:1 addition product isolated in nearly quantitative yield is structurally characterized by a bent, 4-electron type η¹:η²-diazoalkane ligand, with the terminal nitrogen atom symmetrically bridging the metal-metal “single bond” (d(MoMo) 305.0(2) pm; d(Mo---N(1)) 212.0(12) and 212.6(10) pm, respectively) and the second nitrogen atom being bonded to one molybdenum atom only (d(Mo---N(2)) 213.4(13) pm).     

Reaktionen mit phosphororganischen Verbindungen, 49. Synthese und 1H-NMR-Spektren von (3-Acylbicyclo[2.2.1]hept-5-en-2-yl)phosphonsäureestern

Reactions with Organophosphorus Compounds, 49. Synthesis and ¹H NMR Spectra of (3-Acylbicyclo[2.2.1]hept-5-en-2-yl)phosphonates Reaction of the (E)-(β-acylvinyl)phosphonates 1 with cyclopentadiene yields the isomeric norbornylphosphonates 2 (endo-acyl, exo-P) and 3 (exo-acyl, endo-P) in a 7:3 ratio. With 1,3-cyclohexadiene the corresponding bicyclooctenyl derivatives 7 and 8 are obtained from 1a . The (Z)-phosphinylacrylate 4 gives with cyclopentadiene the isomers 5 (exo-CO₂Me, exo-P) and 6 (endo-CO₂Me, endo-P) in nearly equal amounts. The configuration of the cycloadducts has been proved by ¹H NMR spectroscopy.