Intramolecular hydrogen bonding in 3‐imino‐propenylamine: Theoretical investigations

Intramolecular H‐bonds existing for derivatives of 3‐imino‐propenylamine have been studied using the B3LYP/6‐311++G** level of theory. The nature of these interactions, known as resonance‐assisted hydrogen bonds, has been discussed. Vibrational frequencies for α‐derivatives were calculated at the same level of theory. The topological properties of the electron density distributions for N? H···N intramolecular bridges have been analyzed in terms of the Bader theory of atoms in molecules (AIM). Calculation for 3‐imino‐propenylamine derivatives in water solution were also carried out at B3LYP/6‐311++G** level of theory. Finally, the analysis of hydrogen bond in this molecule and their derivatives by quantum theory of natural bond orbital methods fairly support the ab initio results. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2009     

Optimization strategy based on genetic algorithms and neural networks applied to a polymerization process

The article presents a simple and general methodology, especially destined to the optimization of complex, strongly nonlinear systems, for which no extensive knowledge or precise models are available. The optimization problem is solved by means of a simple genetic algorithm, and the results are interpreted both from the mathematical point of view (the minimization of the objective function) and technological (the estimation of the achievement of individual objectives in multiobjective optimization). The use of a scalar objective function is supported by the fact that the genetic algorithm also computes the weights attached to the individual objectives along with the optimal values of the decision variables. The optimization strategy is accomplished in three stages: (1) the design and training of the neural model by a new method based on a genetic algorithm where information about the network is coded into the chromosomes; (2) the actual optimization based on genetic algorithms, which implies testing different values for parameters and different variants of the algorithm, computing the weights of the individual objectives and determining the optimal values for the decision variables; (3) the user's decision, who chooses a solution based on technological criteria. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

Simultaneous determination of trace oxyhalides and haloacetic acids using suppressed ion chromatography-electrospray mass spectrometry

A new analytical procedure for the simultaneous determination of trace oxyhalides and haloacetic acids (HAs) in drinking water and aqueous soil extracts is described. The method uses micro-bore ion chromatography (IC) coupled with suppressed conductivity (SC) and electrospray ionization mass spectrometric detection (ESI-MS). The IC-SC-ESI-MS system included a secondary flow of 100% MeOH, which was added to the column eluate (post-suppressor) and resulted in a significant increase in sensitivity for all analytes. All ESI-MS parameters were optimized for HA analysis and sensitivity quantitatively compared to suppressed conductivity. Full analytical performance characteristics for the developed method are presented for monochloro-, monobromo-, dichloro-, dibromo-, trichloro-, bromochloro, chlorodifluoro-, trifluoro-, dichlorobromo- and dibromochloroacetic acid, as well as the oxyhalides iodate, bromate, chlorate and perchlorate. In the case of the HAs, an optimised 25-fold SPE preconcentration method meant all analytes could be readily detected well below the USEPA 60 μg/L regulatory limit using conductivity and/or ESI-MS. The IC-ESI-MS method was applied to the determination of oxyhalides and HAs in both soil extracts and drinking water samples. Soil samples were extracted using ultra pure water with subsequent determination of perchlorate at 1.68 μg/g of soil. A drinking water sample containing HAs was preconcentrated using LiChrolut EN solid phase extraction cartridges with subsequent sulphate and chloride removal. Total HAs were determined at 13 μg/L.     

Preparation and structure of three solvatomorphs of the polymer [Co(dbm)2(4ptz)]n: spin canting depending on the supramolecular organization

The syntheses and X-ray structures of three isomeric 1D coordination polymers are reported. The complex [Co(dbm)2(MeOH)2] (1) was used as a precursor in these reactions. The preparation and structure of 1 is also presented; this mononuclear complex is in the cis configuration because this allows the formation of a network of intermolecular hydrogen bonds in the solid state. Reaction of 1 with 2,4,6-tris-(4-pyridyl)-1,3,5-triazine (4ptz) yields the polymers [Co(dbm)2(4ptz)]n.nTHF (2a), [Co(dbm)2(4ptz)]n.0.75nTHF.0.5nEt2O (2b), and [Co(dbm)2(4ptz)]n.3nDMF (2c) in the form of zigzag chains, instead of the expected honeycomb architectures. This is because of the establishment of extended pi-pi stacking throughout these solids, which could not have occurred otherwise. Compounds 2a, 2b, and 2c are solvatomorphs, and formation of either one of them depends on the exact conditions of crystallization, which lead to significant differences in the supramolecular organization of the chains. Bulk magnetic measurements on 2a reveal weak antiferromagnetic exchange within the chains and small ordering throughout the solid that results in the manifestation of the phenomenon of spin canting, whereas for 2c the different supramolecular organization causes the antiferromagnetic exchange not to result in spin canting.     

Surfactant control of gas uptake: effect of butanol films on HCl and HBr entry into supercooled sulfuric acid

The entry of HCl into 60-68 wt % D(2)SO(4) and HBr into 68 wt % acid containing 0-0.18 M 1-butanol was monitored by measuring the fractions of impinging HCl and HBr molecules that desorb as DCl and DBr after undergoing H --> D exchange within the deuterated acid. The addition of 0.18 M butanol to the acid creates butyl films that reach approximately 80% surface coverage at 213 K. Surprisingly, this butyl film does not impede exchange but instead enhances it: the HCl --> DCl exchange fractions increase from 0.52 to 0.74 for 60 wt % D(2)SO(4) and from 0.14 to 0.27 for 68 wt % D(2)SO(4). HBr --> DBr exchange increases even more sharply, rising from 0.22 to 0.65 for 68 wt % D(2)SO(4). We demonstrate that this enhanced exchange corresponds to enhanced uptake into the butyl-coated acid for HBr and infer this equivalence for HCl. In contrast, the entry probability of the basic molecule CF(3)CH(2)OH exceeds 0.85 at all acid concentrations and is only slightly diminished by the butyl film. The OD groups of surface butanol molecules may assist entry by providing extra interfacial protonation sites for HCl and HBr dissociation. The experiments suggest that short-chain surfactants in sulfuric acid aerosols do not hinder heterogeneous reactions of HCl or HBr with other solute species.     

Designed Topology and Site‐Selective Metal Composition in Tetranuclear [MM′⋅⋅⋅M′M] Linear Complexes

The ligand 1,3‐bis[3‐oxo‐3‐(2‐hydroxyphenyl)propionyl]benzene (H₄L), designed to align transition metals into tetranuclear linear molecules, reacts with M^II salts (M=Ni, Co, Cu) to yield complexes with the expected [MM???MM] topology. The novel complexes [Co₄L₂(py)₆] ( 2 ; py=pyridine) and [Na(py)₂][Cu₄L₂(py)₄](ClO₄) ( 3 ) have been crystallographically characterised. The metal sites in complexes 2 and 3 , together with previously characterised [Ni₄L₂(py)₆] ( 1 ), favour different coordination geometries. These have been exploited for the deliberate synthesis of the heterometallic complex [Cu₂Ni₂L₂(py)₆] ( 4 ). Complexes 1 , 2 , 3 and 4 exhibit antiferromagnetic interactions between pairs of metals within each cluster, leading to S=0 spin ground states, except for the latter cluster, which features two quasi‐independent S=1/2 moieties within the molecule. Complex 4 gathers the structural and physical conditions, thus allowing it to be considered as prototype of a two‐qbit quantum gate.     

Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry of 4-sulfophenyl isothiocyanate-derivatized peptides on AnchorChip sample supports using the sodium-tolerant matrix 2,4,6-trihydroxyacetophenone and diammonium citrate

The reagent 4-sulfophenyl isothiocyanate (SPITC) is an effective, stable, and inexpensive alternative to commercially available reagents used in the N-terminal sulfonation of peptides for enhanced postsource decay (PSD) in matrix-assisted laser desorption/ionization time-of-flight mass spectrometric (MALDI-TOFMS) analyses. However, suppression of ionization of sulfonated peptides due to sample and matrix contaminants such as sodium can be a problem when using prestructured MALDI target sample supports, such as the Bruker Daltonics AnchorChip. We show that use of the salt-tolerant matrix 2,4,6-trihydroxyacetophenone containing diammonium citrate (THAP/DAC) as an alternative to alpha-cyanohydroxycinnamic acid (HCCA) reduces the need for extensive washing of ZipTip-bound peptides or additional on-target sample clean-up steps. Use of the THAP/DAC matrix results in selective ionization of sulfonated peptides with greater peptide coverage, as well as detection of higher mass derivatized peptides, than was observed for HCCA or THAP alone. The THAP/DAC matrix is quite tolerant of sodium contamination, with SPITC-peptides detectable in preparations containing up to 50 mM NaCl. In addition, THAP/DAC matrix was found to promote efficient PSD fragmentation of sulfonated peptides. We demonstrated the utility of using the THAP/DAC MALDI matrix for peptide sequencing with DNA polymerase beta tryptic peptide mixture, as well as tryptic peptides derived from Xiphophorus maculatus brain extract proteins previously separated by two-dimensional polyacrylamide gel electrophoresis (2D-PAGE).