X-ray absorption spectroscopy study of the hydrogen bond network in the bulk water of aqueous solutions

We utilized X-ray absorption spectroscopy (XAS) and X-ray Raman scattering (XRS) in order to study the ion solvation effect on the bulk hydrogen bonding structure of water. The fine structures in the X-ray absorption spectra are sensitive to the local environment of the probed water molecule related to the hydrogen bond length and angles. By varying the concentration of ions, we can distinguish between contributions from water in the bulk and in the first solvation sphere. We show that the hydrogen bond network in bulk water, in terms of forming and breaking hydrogen bonds as detected by XAS/XRS, remains unchanged, and only the water molecules in the close vicinity to the ions are affected.     

Radical carbonylation/reductive cyclization for the construction of tetrahydrofuran-3-ones and pyrrolidin-3-ones

Beta-hydroxyalkyl aryl chalcogenides obtained by regioselective ring-opening of epoxides with benzeneselenolate or -tellurolate were found to undergo efficient hetero-Michael addition when treated with ethyl propiolate. Subsequent carbonylation/reductive cyclization of the resulting vinylogous carbonates in the presence of AIBN/TTMSS and carbon monoxide (80 atm) afforded 2,5-disubstituted tetrahydrofuran-3-ones, predominantly as cis isomers (cis/trans = 4/1-9/1). Starting from a polymer-supported diaryl diselenide, the methodology was also successfully extended to solid-phase synthesis. Vinylogous carbamates prepared by hetero-Michael addition of aziridines to electron-deficient alkynes were regioselectively ring-opened with benzeneselenolate from the sterically least hindered side. Radical carbonylation/reductive cyclization of the resulting N-vinyl-beta-amino-alkyl phenyl selenides afforded 2,5-disubstituted pyrrolidin-3-ones, predominantly as cis isomers (cis/trans = 3/1-12/1).     

Sinusoidal crossflow microfiltration device--experimental and computational flowfield analysis

We present an analysis of the flowfield inside a novel crossflow microfiltration device. The filter performance relies on shear focusing by means of a corrugated channel. The flow and shear stress characteristics inside the filter are studied by means of both micro Particle Image Velocimetry (micro-PIV) measurements and Computational Fluid Dynamics (CFD) analysis. We show that an increase of the shear rate by 55-85% as compared to a straight channel geometry is achieved for crossflow velocities ranging from 0.05 m s(-1)-0.8 m s(-1)(Re 5-70). This substantial increase in the local wall shear may improve filter performance in terms of reduced clogging and cell cake formation as compared to conventional crossflow filtration devices. Our current investigation, along with the fact that the filter employs no complex, three dimensional geometrical patterns, advanced pumping schemes, nor has a need for costly assembly and sealing procedures, indicates that the sinusoidal crossflow microfiltration module may serve as a technically and economically feasible solution for integrated lab-on-a-chip devices. Furthermore, the presented approach of shear-focusing may be beneficial in other bio-chemical contexts, such as cell lysis and surface chemistry.     

Differential potentiometric stripping analysis

Differential potentiometric stripping analysis, a sensitive instrumental modification of potentiometric stripping analysis, is described. For trace elements like cadmium and lead, which exhibit transport-controlled potentiometric stripping, signal enhancement is possible by employing a scheme involving multiple stripping and re-reduction of the preconcentrated analytes. For such elements the detection limit is below 5 × 10^-10 M with 60-s plating. The accuracy of the technique is tested on a biological reference material. Like potentiometric stripping analysis, the technique presented is not sensitive to reversible redox couples in solution.     

De novo metallonucleases based on helix-loop-helix motifs

Three new 42-mer peptides (PR I-III) designed to fold into a hairpin helix-loop-helix motif have been prepared. In the peptide sequence two (PR II-III) or four (PR I) copies of an unnatural amino acid bearing a triazacyclononane metal-ion binding site (ATANP) have been inserted in appropriate positions to allow the ligand subunits to face each other either within the same helix or between the two helices of the hairpin motif. Circular dichroism (CD) studies in solution have shown that the apopeptides adopt a well-defined helix-loop-helix tertiary structure that dimerizes in solution at concentrations above 200 microM to form a four-helix bundle. However, the helical content is strongly dependent on pH and metal-ion binding. Both protonation of the amines of the triazacyclononane units present in the ATANP lateral arm and complexation with Zn(II) ions cause a significant decrease of the helical content of the sequences. The Zn(II) complexes of the three peptides catalyze the transesterification of the RNA model substrate 2-hydroxypropyl-p-nitrophenyl phosphate (HPNP) with different efficiency. The best catalyst appears to be PR I-4 Zn(II), that is, the peptide incorporating four ATANP units. Michaelis-Menten saturation kinetics allowed us to estimate that substrate fully bound to the catalyst reacts 380 times faster than in its absence. The kinetic evidence suggests cooperativity between (at least two) metal ions: one activating the nucleophilic species (directly or indirectly) and the other facilitating nucleophilic attack by coordination of the phosphate.     

Methyl 4‐O‐benzoyl‐2,3‐O‐isopropyl­idene‐α‐l‐rhamnopyran­oside

The title compound, C₁₇H₂₂O₆, has an exocyclic ester group at the hexopyranosyl sugar residue. The carbonyl group shows a conformation that is eclipsed with respect to the adjacent ring C—H bond. The two ester torsion angles are denoted by syn and cis conformations. One of these torsion angles is indicated to have a similar conformation in solution, as analyzed by NMR spectroscopy and a Karplus‐type relationship.     

LIGHT-DRIVEN H2 PRODUCTION WITH PROFLAVIN AND HYDROGENASE: COMPARISON OF CYTOCHROME C3 AND METHYL VIOLOGEN AS e- MEDIATORS

We have studied the hydrogenase-catalyzed production of H, when either its natural electron mediator cytochrome c₃ (c₃) or the artificial mediator methyl viologen (MV) was reduced by illumination of proflavin (PF) in the presence of ethylenediaminetetraacetate (EDTA). The reduction rates of MV and c₃ were comparable at equivalent concentrations of PF, taking into account the four redox sites of c₃. However, when the concentration of c₃ exceeded that of PF, the reduction rate decreased. We explain this by light quenching. In the H₂-producing system, MV was more efficient than c₃ as electron mediator when the initial reaction rates were compared. However, under certain conditions with MV, the rate of H₂ production decreased rapidly with time of illumination, whereas with c₃ it consistently remained stable. Possible reasons for this difference are discussed.
Severe inactivation of hydrogenase was observed in the absence of the primary electron donor EDTA. It is concluded that this inactivation is caused by the excited state of PF     

Synthesis, structure and reactivity of ferrio-chloro-phosphanes, -arsanes and -stibanes [(CO)2(eta5-C5Me5)FePn(Cl)R] (Pn = P, As, Sb); R = tetramethylcyclopentadienyl, 2,7-di-tert-butylfluorenyl, 2,7-di-tert-butyl-9-trimethylsilylfluorenyl) as precursor to novel metallo-phosphaalkenes, -arsaalkenes, and -stibaalkenes

Reaction of one equivalent of the complexes [FeCp*(CO)2PnCl2] (Pn = P, As, Sb) with tetramethylcyclopentadienyllithium afforded compounds [FeCp*(CO)2[Pn(Cl)(C5Me4H)]]. Dehydrochlorination by means of tert-butyllithium led to decomposition. Only in the case of the phosphorus compound was evidence for the initial formation of a phosphaalkene given by 31P NMR spectroscopy. Similarly treatment of equimolar amounts of [FeCp*(CO)2PnCl2] with 2,7-di-tert-butyl-9-H-fluorenyllithium or 2,7-di-tert-butyl-9-trimethylsilylfluorenyllithium yielded the asymmetrically substituted ferriopnicogenanes [FeCp*(CO)2[Pn(Cl)-9-R-Fl*]] (Pn = P, As, Sb; R = H, Me3Si; Fl* = 2,7-di-tert-butylfluorenylidene). Dehydrohalogenation of [FeCp*(CO)2[Pn(Cl)-9-H-Fl*]] with lithium diisopropylamide resulted in the formation of the anticipated phosphaalkene [FeCp*(CO)2[P = Fl*]], whereas in the case of the arsenic and antimony derivatives the novel ferriopnicogenanes [FeCp*(CO)2[Pn(9-H-Fl*)2]] (Pn = As, Sb) were obtained as products. The new compounds were characterized by elemental analyses and spectra (IR, 1H, 13C, 29Si, 31P NMR). The molecular structures of [FeCp*(CO)2[Pn(Cl)(C5Me4H]]] (Pn = As, Sb), [FeCp*(CO)2[As(Cl)(9-Me3Si-Fl*)]] and [FeCp*(CO)2[Sb(9-H-Fl*]2] were elucidated by single X-ray diffraction analyses.