Ab initio prediction of vibrational spectra: A database approach

Efforts to develop a database of quadratic force fields for organic molecules are described. The database is based on systematic ab initio calculations, scaled to reproduce the experimentally observed frequencies. The choice of the theoretical method, the basis sets, geometries, internal coordinates and the scaling procedure are discussed. A key point in the procedure is the automatic generation of the internal valence coordinates. This is also very advantageous for geometry optimization. The database should permit the prediction of vibrational frequencies for most organic molecules to 10–20 cm⁻¹, together with semiquantitative intensities. The accuracy is sufficient to identify unknown compounds from a list of reasonable candidates.     

Electrocatalytic oxidation of thiosulfate on a modified nickel hexacyanoferrate film electrode

Summary A modified nickel hexacyanoferrate film glassy carbon electrode is prepared by the electrochemical deposition technique. The film is very stable upon voltammetric scanning in the potential range of 1.0 to –0.5 V (vs. SCE) and an oxidation peak occurs at 0.35 V (vs. SCE) (1 mol/l NaNO₃). The effects of electrolyte, solvent, coexisting ions and other variables on the voltammetric behaviour of the modified film have been studied. The thickness of the resulting film can be controlled by changing the number of voltammetric cycles and the concentrations of nickel(II) and hexacyanoferrate(III) ions. The film shows catalytic activity towards electrooxidation of thiosulfate with a peak potential +0.5 V (K^–-containing media). This oxidation potential of thiosulfate on the modified electrode is shifted negatively by about 550 mV as compared to the naked glassy carbon electrode. For practical application, the modified electrode can be used for the determination of thiosulfate in concentrations from 5.0×10^–5 to 1.0×10^–1 mol/l. This method has been successfully applied to the determination of thiosulfate in photographic waste effluents.     

Micellar shape change and internal segregation induced by chemical modification of a tryptych block copolymer surfactant

We report the detailed characterization of micelles formed by two nonionic, amphiphilic ABC triblock copolymers. Poly(ethylene oxide)-b-poly(styrene)-b-1,2-poly(butadiene) (PEO-b-PS-b-PB) triblock copolymer "OSB" forms core-corona spherical micelles in aqueous solution, and the two hydrophobic blocks S and B are mixed homogeneously within the micelle core. PEO-b-PS-b-PB:C6F13I triblock copolymer "OSF" was prepared by selective fluorination of the B block in OSB with n-perfluorohexyl iodide. Fluorination of the B block induces internal segregation into an inner F core and an intermediate S shell. Furthermore, the strong incompatibility that results from fluorination drives a shape change into an oblate ellipsoid. These micellar morphologies are confirmed by combined light, neutron, and X-ray scattering measurements, as well as TEM imaging.     

The study of nafion/xanthine oxidase/au colloid chemically modified biosensor and its application in the determination of hypoxanthine in myocardial cells in vivo

A novel hypoxanthine (Hx) microsensor was constructed. In this work, Nafion xanthine oxidase (XOD) and Au colloid were immobilized onto the surface of a Pt microelectrode. The enzyme biosensor displayed a quick and sensitive response to Hx. Under physiological conditions, a low detection limit, with high selectivity and sensitivity for Hx determination were obtained. The oxidation current [investigated using current-time (I-t) plots] was linear with Hx concentration ranging from 2.0 x 10(-7) to 2.0 x 10(-5) mol L(-1) with a calculated detection limit of 1.0 x 10(-7) mol L(-1) (S/N of 3). The biosensor should be promising for in vivo measurement of Hx without interferences and fouling. The change of Hx concentration in cardiac myocytes stimulated by L-arginine (L-Arg) and acetylcholine (Ach) was also studied.     

Rethinking ramoplanin: the role of substrate binding in inhibition of peptidoglycan biosynthesis

Ramoplanin is a cyclicdepsipeptide antibiotic that inhibits peptidoglycan biosynthesis. It was proposed in 1990 to block the MurG step of peptidoglycan synthesis by binding to the substrate of MurG, Lipid I. The proposed mechanism of MurG inhibition has become widely accepted even though it was never directly tested. In this paper, we disprove the accepted mechanism for how ramoplanin functions, and we present an alternative mechanism. This work has implications for the design of ramoplanin derivatives and may influence how other proposed substrate binding antibiotics are studied.     

Heterotrimetallic 4f-3d coordination polymers: synthesis, crystal structure, and magnetic properties

A series of cyano-bridged heterotrimetallic complexes [CuL](2)Ln(H(2)O)(2)M(CN)(6).7H(2)O have been synthesized by the reactions of CuL (L(2)(-) = dianion of 1,4,8,11-tetraazacyclotradecane-2,3-dione), Ln(3+) (Ln = Gd or La), and [M(CN)(6)](3)(-) (M = Co, Fe, or Cr). X-ray diffraction analysis reveals that these complexes are isostructural and have a novel chain structure. The Ln(3+) ion is eight-coordinated by six oxygen atoms of two CuL and two water molecules and two nitrogen atoms of the bridging cyano ligands of two [M(CN)(6)](3)(-), while the [M(CN)(6)](3)(-) anion connects two Ln(3+) using two trans-CN(-) ligands giving rise to a chainlike structure. In the chain, every CuL group tilts toward the CN(-) ligand of adjacent [M(CN)(6)](3)(-) with the Cu-N(cyano) contacts ranging from 2.864(6) to 2.930(6) A. Magnetic studies on the CuGdCo complex (1) indicate the presence of ferromagnetic coupling between Cu(II) and Gd(III). The CuLaCr (5) and CuLaFe (2) complexes exhibit ferromagnetic interaction between paramagnetic Cu(II) and Cr(III)/Fe(III) ions through the weak cyano bridges (Cu-N(cyano) = 2.930(6) A for 2). A global ferromagnetic interaction is operative in the CuGdFe complex (3) with the concurrence of dominant ferromagnetic Cu(II)-Gd(III) and minor antiferromagnetic Gd(III)-Fe(III) as well as the ferromagnetic Cu(II)-Fe(III) interaction. For the CuGdCr complex (4), an overall antiferromagnetic behavior was observed, which is attributed to the presence of dominant antiferromagnetic Cr(III)-Gd(III) coupling and the minor ferromagnetic Cu(II)-Gd(III) and Cu(II)-Cr(III) interaction. Moreover, a spin frustration phenomenon was found in complex 4, which results from the ferro-ferro-antiferromagnetic exchanges in the trigonal Cu-Gd-Cr units. The magnetic susceptibilities of these complexes were simulated using suitable models. The magneto-structural correlation was investigated. These complexes did not show a magnetic phase transition down to 1.8 K.     

Z‐bpy,a New C2‐Symmetric Bipyridine Ligand and Its Application in Enantioselective Copper(I)‐Catalyzed Cyclopropanation of Olefins

A rigid C₂‐symmetric chiral bipyridine ligand Z‐bpy with a triptycene‐like backbone was designed and synthesized from simple chemicals in a scalable route. Using this new ligand, copper(I) catalyzed cyclopropanation of styrenes with commercial ethyl diazoacetate produced various corresponding cyclopropanes in high yields, diastereoselectivity and enantioselectivity up to 97% ee.     

High speed liquid chromatography with small bore columns

Using a specially designed column system, we have systematically investigated the effect of mobile phase velocity on column efficiency. The performance of small bore columns operated at different linear velocities of mobile phase was examined for three different types of injection system. Using the value of H^∞/u or n^∞/t${}_{\text{r}}^{\text{º}}$ as a criterion of a high speed separation, we calculated values of n/t${}_{\text{r}}^{\text{º}}$ for different solutes according to the equation \documentclass{article}\pagestyle{empty}\begin{document}$ {{\rm n}\mathord{\left/ {\vphantom {{\rm n} {{\rm t}_{\rm r}^ \circ }}}\right. \kern-\nulldelimiterspace} {{\rm t}_{\rm r}^ \circ }} = {{{\rm n}^\infty } \mathord{\left/ {\vphantom {{{\rm n}^\infty } {{\rm t}_{\rm r}^ \circ }}} \right. \kern-\nulldelimiterspace} {{\rm t}_{\rm r}^ \circ }}\left({\frac{{1 + {\rm k'}}}{{{\rm k' + }\beta }}} \right)^2 $\end{document}; the results obtained are in agreement with the experimentally determined values. These systematic investigations culminated in the separation of seven compounds in less than 10 s; the respective chromatogram is shown.     

SPME-GC-MSD for Determination of Nine Phenyl Compounds in Snow Water in Beijing China

Solid phase microextraction (SPME) then capillary gas chromatography with mass spectrometric detection have been used for determination of nine phenyl compounds in snow water in Beijing City. Headspace extraction with a fiber coated with 100 µm PDMS was used to extract the compounds. Extraction and desorption times were optimized at 8 and 2 min, respectively. Relative standard deviation (RSD) of the analytical method was found to be less than 5%. The linear range was wide and limits of detection were less than 5 ng mL⁻¹ for the nine target analytes. Several phenyl compounds at ng mL⁻¹ levels were detected in snow samples in Beijing, indicating the corresponding air pollution.     

Time-dependent quantum wave-packet description of the 1pi sigma* photochemistry of phenol

The photoinduced hydrogen elimination reaction in phenol via the conical intersections of the dissociative 1pi sigma* state with the 1pi pi* state and the electronic ground state has been investigated by time-dependent quantum wave-packet calculations. A model including three intersecting electronic potential-energy surfaces (S0, 1pi sigma*, and 1pi pi*) and two nuclear degrees of freedom (OH stretching and OH torsion) has been constructed on the basis of accurate ab initio multireference electronic-structure data. The electronic population transfer processes at the conical intersections, the branching ratio between the two dissociation channels, and their dependence on the initial vibrational levels have been investigated by photoexciting phenol from different vibrational levels of its ground electronic state. The nonadiabatic transitions between the excited states and the ground state occur on a time scale of a few tens of femtoseconds if the 1pi pi*-1pi sigma* conical intersection is directly accessible, which requires the excitation of at least one quantum of the OH stretching mode in the 1pi pi* state. It is shown that the node structure, which is imposed on the nuclear wave packet by the initial preparation as well as by the transition through the first conical intersection (1pi pi*-1pi sigma*), has a profound effect on the nonadiabatic dynamics at the second conical intersection (1pi sigma*-S0). These findings suggest that laser control of the photodissociation of phenol via IR mode-specific excitation of vibrational levels in the electronic ground state should be possible.