High-resolution melting analysis for detection of fusion allele of FUT2

The secretor status of ABH antigens, determined by FUT2 polymorphisms, affects susceptibility to various infectious diseases. In addition to many SNPs responsible for the nonsecretor phenotype, five nonfunctional alleles (se) resulting from copy number variations have been reported. One of the five alleles generated by an unequal crossover between FUT2 and a pseudogene (SEC1), is se^fus. This allele may be misidentified as a functional allele if only common inactivating SNPs are genotyped because it contains the 3ʹ region of the functional FUT2. Therefore, accurate detection of se^fus is desirable. For this purpose, a high-resolution melting (HRM) analysis is developed for detection of se^fus in which a 284bp fragment of SEC1 and se^fus but not FUT2, are amplified. This HRM analysis detected se^fus reliably. Thus, an initial screening or prescreening for se^fus using HRM analysis seems to be useful for association studies of FUT2.     

A Heegaard-type presentation of branched spines and the Reidemeister–Turaev torsion

Branched spines of three-manifolds can be used to represent the homotopy class of vector fields on the ambient manifolds. In this paper, we introduce a way to present branched spines as Heegaard-type diagrams, punctured Heegaard diagrams, and explain a way to compute the Reidemeister–Turaev torsion using these diagrams.     

Sequence-regulated copolymers via tandem catalysis of living radical polymerization and in situ transesterification

Sequence regulation of monomers is undoubtedly a challenging issue as an ultimate goal in polymer science. To efficiently produce sequence-controlled copolymers, we herein developed the versatile tandem catalysis, which concurrently and/or sequentially involved ruthenium-catalyzed living radical polymerization and in situ transesterification of methacrylates (monomers: RMA) with metal alkoxides (catalysts) and alcohols (ROH). Typically, gradient copolymers were directly obtained from the synchronization of the two reactions: the instantaneous monomer composition in feed gradually changed via the transesterification of R(1)MA into R(2)MA in the presence of R(2)OH during living polymerization to give R(1)MA/R(2)MA gradient copolymers. The gradient sequence of monomers along a chain was catalytically controlled by the reaction conditions such as temperature, concentration and/or species of catalysts, alcohols, and monomers. The sequence regulation of multimonomer units was also successfully achieved in one-pot by monomer-selective transesterification in concurrent tandem catalysis and iterative tandem catalysis, providing random-gradient copolymers and gradient-block counterparts, respectively. In contrast, sequential tandem catalysis via the variable initiation of either polymerization or in situ transesterification led to random or block copolymers. Due to the versatile adaptability of common and commercially available reagents (monomers, alcohols, catalysts), this tandem catalysis is one of the most efficient, convenient, and powerful tools to design tailor-made sequence-regulated copolymers.     

Reaction of thioketones with propiolic acids

The reaction of adamantane-2-thione with propiolic acid afforded a novel type of cycloadduct, spiro[adamantane-2,2'-6'H-[1,3]-oxathiin]-6'-one (3a), in quantitative yield. The reaction of thiobenzophenone with propiolic acid gave 2,2-diphenyl-6'H-[1,3]-oxathiin]-6'-one and 4-phenyl-3-thia-3,4-dihydronaphthoic acid in 34% and 35% yields, respectively. The reaction might proceed through a concerted process, as confirmed by kinetics. The reaction of adamantane-2-thione with 2-butynoic acid or phenylpropiolic acid gave the corresponding adducts regioselectively. Interestingly, only one isomer was obtained by the reaction of thiofenchone with propiolic acid, suggesting that the reaction proceeded diastereospecifically. Oxidation of adducts by dimethyldioxirane or m-chloroperoxybenzoic acid gave the corresponding sulfoxides and sulfones. The sulfoxides were thermally decomposed to give disulfide or another type of 1,3-oxathiin-6-one.     

Relationship between segmental anisotropy in polarizability and stationary ultrasonically induced birefringence in polymer solutions

Stationary ultrasonically induced birefringence in various polymer solutions was measured in order to investigate its relation to the anisotropy in polarizability of a polymer chain. From the concentration dependence of stationary ultrasonically induced birefringence in polystyrene–toluene, polycarbonate–chloroform and polybutadiene–toluene solutions, the intrinsic values of the birefringence were obtained. A linear relationship between the intrinsic value of the birefringence per segment and the segmental anisotropy in polarizability was obtained. In aqueous solutions of polyelectrolytes, sodium polystyrenesulfonate and tetramethylammonium polystyrenesulfonate, the birefringence decreased with ionic strength by the addition of the salts. The stationary birefringence per ultrasonic intensity for all polymer solutions investigated here decreased with increasing frequency.     

Branched spines and Heegaard genus of 3-manifolds

We prove that an invariant of closed 3-manifolds, called the block number, which is defined via flow-spines, equals the Heegaard genus, except for S ³ and S ² × S ¹. We also show that the underlying 3-manifold is uniquely determined by a neighborhood of the singularity of a flow-spine. This allows us to encode a closed 3-manifold by a sequence of signed labeled symbols. The behavior of the encoding under the connected sum and a criterion for reducibility are studied.