Photonic Band Effect in Ordered Polystyrene Particle Layers

Abstract

Quasi two-dimensional (2D) photonic band structures have been investigated on ordered polystyrene particle layers by means of polarized transmission spectra for oblique incidence of light. The results are discussed in terms of quasi-2D photonic band effect.     

Confirmation that SNPs in the high mobility group‐A2 gene (HMGA2) are associated with adult height in the Japanese population; wide‐ranging population survey of height‐related SNPs in HMGA2

Adult height is a highly heritable trait in that multiple genes are involved. Recent genome‐wide association studies have identified a novel single‐nucleotide polymorphism (SNP) rs1042725 in the high mobility group‐A2 gene (HMGA2) and shown it to be associated with human height in Caucasian populations. We performed a replication study to examine the associations between SNPs in HMGA2 and adult height in the Japanese population based on autopsy cases. Although we could not confirm a significant association between rs1042725 in HMGA2 and adult height, another SNP, rs7968902, in the gene achieved significance for its association in the same populations, and the effect was the same as that documented previously. These findings permit us to conclude that the SNPs in HMGA2 are common variants influencing human height across different populations. Moreover, a worldwide population study of these SNPs using 14 different populations including Asians, Africans and Caucasians demonstrated that both haplotypes and genotypes for three height‐related SNPs (rs1042725, rs7968682 and rs7968902) in HMGA2 were distributed in an ethnicity‐dependent manner. This information will be useful for clarifying the genetic basis of human height.     

Global analysis of single nucleotide polymorphisms in the exons of human deoxyribonuclease I-like 1 and 2 genes

Several SNPs in the deoxyribonuclease I-like 1 (DNase 1L1) and DNase 1L2 were investigated. In the present study, the genotype distributions of three synonymous SNPs (V59V, rs1050095; P67P, rs1130929; A277A, rs17849495) in the DNase 1L1 gene and four non-synonymous SNPs, V122I (rs34952165), Q170H (rs6643670), and D227A (rs5987256) in the DNase 1L1 gene, as well as D197A (rs62621282) in the DNase 1L2 gene were investigated in 13 populations. In all the populations, no variation was found in four SNPs (V59V, Q170H, D227A, and A277A) in DNASE1L1 or in D197A in DNASE1L2. As for V122I, only the German population showed a low degree of polymorphism. The SNP V122I in DNASE1L1 was monoallelic for the G-allele in all of the Asian and African populations examined, with no polymorphism being evident. Since the A-allele in SNP V122I was distributed in only the Caucasian populations, not in the other ethnic groups, it was confirmed that the A-allele in SNP V122I was Caucasian-specific. On the other hand, only P67P in DNASE1L1 was polymorphic among three synonymous SNPs. The effect of nucleotide substitution corresponding to polymorphic SNP P67P on DNase 1L1 activity was examined: the corresponding nucleotide substitution in polymorphic SNP P67P has little effect on the DNase activity.     

Brownian dynamics simulation of a model simple electrolyte in solvents of low dielectric constant

Brownian dynamics simulations are performed to investigate the ionic transport of model simple electrolytes, in which ions are interacting with each other through the repulsive core and Coulombic interactions. The equivalent conductivity and self-diffusion coefficient show minima as the function of the number density of ions when the dielectric constant of the solvent is low. Although the minimum of the former is in harmony with various experiments, no experiment has ever been reported on that of the latter. The analysis of time-dependent transport coefficients reveals that the presence of the minima is ascribed to the slow dynamics, rather than to static association models. The inclusion of a model function that resembles the short-range part of the potential of mean force induced by solvent affects the transport coefficients qualitatively, which suggests the importance of solvent-induced potential of mean force in the conduction mechanism of electrolytes in solvents of low dielectric constant.     

Roles of translational and reorientational modes in translational diffusion of high-pressure water: comparison with soft-core fluids

The dynamics of two soft-core fluids that show the increase in diffusivity with isothermal compression is studied with the mode-coupling theory (MCT). The anomalous density dependence of the diffusivity of these fluids is reproduced by the theory, and it is ascribed to the decrease in the first peak of the structure factor. The mechanism is quite different from that of high-pressure water revealed by MCT on molecular liquids described by the interaction-site model [T. Yamaguchi, S.-H. Chong, and F. Hirata, J. Chem. Phys., 119, 1021 (2003)]. The structures used in that study, calculated by the reference interaction-site model integral equation theory, showed the increase in the height of the first peak of the structure factor between oxygen atoms, whereas the structure obtained by molecular dynamics (MD) simulations shows the decrease in the peak height. In this work, calculations with MCT are performed on the simple fluids whose structure factor is the same as that between oxygen atoms of water from MD simulation, in order to clarify the role of translational structure on the increase in diffusivity with compression. The conclusion is that both the translational and reorientational modes contribute to the increase in diffusivity, and the effect of the latter is indispensable for the anomaly alone at least above freezing temperature.     

Laser-induced fluorescence spectra of Ne- and Ar -aniline van der waals complexes in supersonic jets. Analysis of rotational structures

Laser-induced fluorescence spectra of Ne- and Ar -aniline complexes were observed with a resolution of 0.04 cm^?1. By a simulation analysis of the rotational structures, the distances between the rare-gas atom and the aromatic ring of aniline were found to be 3.35 ± 0.04 and 3.50 ± 0.04 A in the X?¹A₁ state of the Ne and Ar complexes, respectively, and about 0.05 A shorter when aniline was excited to the ùB₂ state.