Quantitative evaluation of lectin‐reactive glycoforms of α1‐acid glycoprotein using lectin affinity capillary electrophoresis with fluorescence detection

α₁‐Acid glycoprotein (AGP) was previously shown to be a marker candidate of disease progression and prognosis of patients with malignancies by analysis of its glycoforms via lectins. Herein, affinity capillary electrophoresis of fluorescein‐labeled AGP using lectins with the aid of laser‐induced fluorescence detection was developed for quantitative evaluation of the fractional ratios of concanavalin A‐reactive or Aleuria aurantia lectin‐reactive AGP. Labeled AGP was applied at the anodic end of a fused‐silica capillary (50 μm id, 360 μm od, 27 cm long) coated with linear polyacryloyl‐β‐alanyl‐β‐alanine, and electrophoresis was carried out for about 10 min in 60 mM 3‐morpholinopropane‐1‐sulfonic acid‐NaOH buffer (pH 7.35). Addition of the lectins to the anode buffer resulted in the separation of lectin‐reactive glycoform peaks from lectin‐non‐reactive glycoform peaks. Quantification of the peak area of each group revealed that the percent of lectin‐reactive AGP is independent of a labeling ratio ranging from 0.4 to 1.5 mol fluorescein/mol AGP, i.e. the standard deviation of 0.5% for an average of 59.9% (n=3). In combination with a facile procedure for micro‐purification of AGP from serum, the present procedure, marking the reactivity of AGP with lectins, should be useful in determining the prognosis for a large number of patients with malignancies.     

Ariakemicins A and B, novel polyketide-peptide antibiotics from a marine gliding bacterium of the genus Rapidithrix

Ariakemicins A (1) and B (2), unusual linear hybrid polyketide-nonribosomal peptide antibiotics, were discovered from the fermentation extract of the marine gliding bacterium Rapidithrix sp. These metabolites were positional isomers with regard to a double bond and chromatographically inseparable, rendering the structure study on a mixture basis. The ariakemicins were composed of threonine, two omega-amino-(omega-3)-methyl carboxylic acids with diene or triene units, and delta-isovanilloylbutyric acid. The antibiotics selectively inhibited the growth of Gram-positive bacteria.     

Pair Distribution Function from Liquid Jet Nanoparticle Suspension using Femtosecond X-ray Pulses

X-ray scattering data measured on femtosecond timescales at the SACLA X-ray Free Electron Laser (XFEL) facility on a suspension of HfO₂ nanoparticles in a liquid jet were used for pair distribution function (PDF) analysis. Despite a non-optimal experimental setup resulting in a modest Q_max of ~8 Å⁻¹, a promising PDF was obtained. The main features were reproduced when comparing the XFEL PDF to a PDF obtained from data measured at the PETRA III synchrotron light source. Refining structural parameters such as unit cell dimension and particle size from the XFEL PDF provided reliable values. Although the reachable Q_max limited the obtainable information, the present results indicate that good quality PDFs can be obtained on femtosecond timescales if the experimental conditions are further optimized. The study therefore encourages a new direction in ultrafast structural science where structural features of amorphous and disordered systems can be studied.     

Control of carrier concentration in Bi-2212

We realized highly underdoped Bi-2212 crystals by using a Bi substitution into a Sr site (x), together with the excess oxygen (δ) control. The samples with x = 0–0.3 were grown by a traveling solvent floating zone method. For each x, δ was varied using the precision annealing method [1]. Under several assumptions, the effective Bi valence was evaluated to be +2.2, which is much lower than the formal valence +3. This indicates that the Bi substitution accompanies additional uptake in excess oxygen. The x dependent δ-doping level p relation and the observed shrink in the c-axis length are consistent with this assumption. Based on the decomposition phase diagram obtained in this study, T_c of 22 K was realized by careful annealing treatments. The samples showed a superconducting volume fraction of over 50%.     

Direct observation of rectified motion of vortices in a niobium superconductor

Using Lorentz microscopy to directly image vortices, we investigate vortex motion control and rectification in a niobium superconductor. We directly observe a net motion of vortices along microfabricated channels with a spatially asymmetric potential, even though the vortices were driven by an oscillatory field. By observing the individual motion of vortices, we clarify elementary processes involved in this rectification. To further demonstrate the ability to control the motion of vortices, we created a tiny vortex "racetrack" to monitor the motion of vortices in a closed circuit channel.     

Development of dispersed-type sonophotocatalytic process using piezoelectric effect caused by ultrasonic resonance

Recently, degradation of persistent organic pollutants (POPs) with low biodegradability in the environment and in industrial and municipal wastewaters has gained importance. In this study, a dispersed-type sonophotocatalysis (SP) process, which is a combination of sonolysis and photocatalysis with dispersed light sources, has been proposed for the effective and energy-efficient degradation of POPs. In this method, the piezoelectric effect caused by ultrasonic resonance in a piezoelectric element is used for producing luminescence in a LED. A luminescent device composed of eight UV-LEDs and a piezoelectric element was designed for dispersion of UV light in water; this device was confirmed to show luminescence under ultrasonic irradiation. Sonophotocatalytic degradation experiments were carried out using several such devices, and the results were compared with those obtained in sonolysis, photocatalysis, and fixed-type SP. The comparison showed that the degradation rate constants in fixed-type and dispersed-type SP were larger than the sum of the rate constants obtained for sonolysis and photocatalysis; further, the synergetic effect caused by the combination of sonolysis and photocatalysis was 7.5% and 18% in fixed-type and dispersed-type SP, respectively.     

Orientation of the alkyl side chains and glucopyranose rings in Langmuir–Blodgett films of a regioselectively substituted cellulose ether

An arrangement for the long alkyl side chains in a Langmuir–Blodgett (LB) film from regioselectively alkylated 2,3-di-O-octadecylcellulose on an Au-coated substrate was investigated using Fourier transform infrared reflection absorbance spectroscopy. The IR results indicated that the hydrophobic long alkyl side chains were forced to be repellent to the surface of water, resulting in deposition on the substrate, with it being tilted in the vertical direction, and further formed both hexagonal and orthorhombic crystalline structures up to 10 layers in the LB film. In addition, molecular modeling with CAChe software indicated that the optimized assembly of the side chains was supposed to own a vertical arrangement against the substrate surface after compression of the monolayer. This means that the conformation of 2₁ screw of the cellulose molecular chain may be altered by the compression to have an unusual conformation by a different φ–ψ dihedral angle such as onefold axis without a symmetry element.     

Increased levels of 8-hydroxy-2'-deoxyguanosine in Drosophila larval DNA after irradiation with 364-nm laser light but not with X-rays

Exposure to UVA light causes damage to cellular components such as DNA and membrane lipids. We showed previously that UVA irradiation can induce mutations in Drosophila larvae and that the major lesions responsible for mutations were not thymidine dimers when wavelengths tested became longer. The use of a longer wavelength with UVA laser apparatus (364 nm) has made it possible to test the effects of this powerful light in biological organisms. In the present study, we irradiated third instar larvae of the urate-null Drosophila mutant strain y v ma-l, which is sensitive to oxidative stress, and compared the effects of 364 nm light irradiation with the effects of X-rays. To assay viability, some of the larvae were kept at 25 degrees C until they eclosed in order to obtain a measure of viability. The remaining larvae were used to measure the amount of 8-hydroxydeoxyguanosine (8-OHdG), an indicator of oxidative DNA damage. The amount of 8-OHdG increased and viability decreased in response to increased UV dose in both the y v ma-l and wild-type strains. With irradiation of 600 kJ m(-2), 8-OHdG/10(6)dG was 7.2 +/- 3.2 and 6.2 +/- 2.0 in y v ma-l and wild-type strains, respectively, whereas the respective levels were 2.2 +/- 0.6 and 2.3 +/- 0.8 without irradiation. Our results indicated that irradiation with a 364-nm laser light caused significant oxidative damage in Drosophila larval DNA; however, induction of the damage was not prohibited by urate. To the best of our knowledge, this is the first report of a study in whole animals that shows increased levels of 8-OHdG in response to 364-nm UVA. X-ray ionizing radiation is also thought to generate reactive oxygen species in irradiated cells. We found that the amount of 8-OHdG in DNA following X-ray radiation remained unchanged in both strains, though survival rates were affected. X-ray-generated oxidative damage in Drosophila cells was followed by cell death but not DNA base oxidation, and the damage was suppressed by urate. The overall results suggest significant differences in the major in vivo oxidative damage caused by 364-nm light and X-rays.