Comprehensive study of proteins that interact with microcystin-LR

We carried out a comprehensive study of proteins that exhibit specific interactions with a naturally occurring toxin, microcystin (MC)-LR, in order to gain insight into the unknown underlying mechanism of MC virulence. This audacious study employed a simple affinity test that used MC-LR immobilized on an original ethylene oxide based monolithic solid phase (Moli-gel), and swine liver lysate. Some of the proteins that interacted with MC-LR on this original affinity resin were separated by SDS-PAGE, measured by nano-LC/MS/MS after trypsin digestion, and identified using a Mascot database search. Protein sequence analyses revealed that glutathione S-transferase (GST) was one of the candidate target proteins for MC-LR. This protein was confirmed as a target protein for MC-LR based on the results of for the inhibition of an enzymatic reaction by Dhb-MC-LR. Moreover, L-3-hydroxyacyl coenzyme A dehydrogenase (HDHA) was shown to be one of the proteins that specifically interacts with MC-LR. Our results demonstrated that our analytical systems based on an original affinity resin and nano-LC/MS/MS were effective for target protein research.     

Heck reactions of iodobenzene and methyl acrylate with conventional supported palladium catalysts in the presence of organic and/or inorganic bases without ligands

The vinylation of iodobenzene with methyl acrylate has been studied with several supported palladium catalysts in N-methylpyrrolidone in the presence of triethylamine and/or sodium carbonate. The reaction can be performed in air without any solubilizing or activating ligands. It was found that significant amounts of palladium leach out into the solvent and these dissolved Pd species essentially catalyze the reaction. It is interesting, however, that almost all the palladium species in the solution can redeposit onto the surface of the supports after the reaction has been completed (at 100% conversion of iodobenzene). Thus, the catalysts were recyclable without loss of activity. The use of both inorganic and organic bases is very effective in the promotion of the palladium redeposition as well as in the enhancement of the reaction rate. For Heck reactions with bromobenzene and chlorobenzene it was found that the use of triethylamine and sodium carbonate increases the selectivity of the Heck coupling product (benzene is also produced for these two substrates), but the mixed bases do not affect the overall rate of reaction as much.     

Supramolecular Engineering of Oligothiophene Nanorods without Insulators: Hierarchical Association of Rosettes and Photovoltaic Properties

Supramolecular rosettes of oligothiophenes that do not bear long aliphatic tails have been designed as semiconducting nanomaterials for solution‐processable bulk heterojunction solar cells. The rosettes consist of six barbiturated thienyl[oligo(hexylthiophene)] units (Bar‐T‐hT_n; n=3,4,5) aggregated by multiple hydrogen bonds, which have been directly visualized by scanning tunneling microscopy (STM) at a solid–liquid interface. ¹H NMR spectroscopy in [D₈]toluene showed that Bar‐T‐hT_n exists as a mixture of monomers and small hydrogen‐bonded aggregates. Hierarchical organization of the hydrogen‐bonded aggregates took place through π–π stacking interactions upon casting their toluene solutions, resulting in the growth of highly ordered nanorods whose widths are consistent with the diameters of the rosettes. The nanorods could be generated in the presence of soluble fullerene derivatives via solution casting or the annealing of the resulting thin films. The solar cells fabricated based on these bulk heterojunction films showed power conversion efficiencies of 1–3 %, which are far higher than those of the non‐hydrogen‐bonded reference oligothiophene and the derivative that possesses long aliphatic tails.     

Uniform encapsulation of fine inorganic powder with soapless emulsion polymerization

The encapsulation of inorganic powder of submicron sizes was attempted with soapless emulsion polymerization of methyl methacrylate in water in the presence of the powder. The powders used were barium sulfate and calcium carbonate. The polymerizations were initiated by potassium persulfate and by sodium bisulfite-oxygen redox reaction. The encapsulation state of the powder with the polymer formed varied considerably with the initiators used. With potassium persulfate initiator the powder surface was partially or totally covered by polymer particles, while with redox initiator under air atmosphere the powder surface was well encapsulated with a film-like polymer layer. From the differences in the encapsulation states, an encapsulation mechanism is suggested for each initiator system. Based upon this mechanism, a new encapsulation process capable of covering uniformly fine powders with a film polymer is proposed. An important factor in the new process is the addition of an extremely small quantity of a surfactant into the reaction system prior to the polymerization.     

Topology effect for DNA structure of cisplatin: topological transformation of cisplatin-closed circular DNA adducts by DNA topoisomerase I.

The reaction of cis-Pt(NH3)2Cl2(cis-DDP)-closed circular DNA adducts with DNA topoisomerse I(topo I) were studied by electron microscopy. We identified unique topoisomers such as a singly-linked catenane (2(1)2), trefoil (3(1), and dimetric catenane (2(1)2), etc., by analysis with electron micrographs. These unique recombination products resulted from cis-DDP-intra-twisting looped DNA adducts by DNA topo I, and the products could be explained a new mechanism based on an odd-even number rule. Our results suggest a new model on the working mechanisms for DNA topology of cis-DDP which enhances the recombination of DNA. Based on our results, we propose the topological idea that the yields of a mini closed circular DNA and pseudo trefoil DNA, etc., can be expected by reaction of cis-DDP-DNA-histone complexes with DNA topo I in the body.     

A new method for synthesis of S-aryl-O-alkyl thiolcarbonates: selenium-catalyzed reaction of alcohols with carbon monoxide and diaryl disulfides

A unique catalytic ability of selenium has been developed. When alcohols were allowed to react with diaryl disulfides in the presence of a catalytic amount of selenium under a pressurized carbon monoxide, S-aryl-O-alkyl thiolcarbonates were obtained in moderate to good yields.     

Agitation effect on the rate of soapless emulsion polymerization of methyl methacrylate in water

In order to identify the factors causing an agitation effect on the rate of soapless emulsion polymerization, the polymerization of methyl methacrylate was carried out in water. Experimental results indicated the significance of monomer transfer from monomer droplets to water. A kinetic model was proposed which would take into account this monomer transfer. This model enabled the effect of monomer transfer on the rate of soapless emulsion polymerization to be evaluated for the present system and the experimental results to be interpreted qualitatively.     

Volume-demanding cis-trans isomerization of 1,2-diaryl olefins in the solid state

Volume-demanding cis-trans photoisomerization of the aromatic substituted alkenes 1-3 in the solid state at room temperature and at 50 degrees C is presented. Alkene 3 did not undergo the cis-trans isomerization in the solid state either at room temperature or at 50 degrees C. The importance of the presence of void space near the reaction center to facilitate the large volume change during cis-trans photoisomerization is discussed.     

Extending Pummerer reaction chemistry. Asymmetric synthesis of spirocyclic oxindoles via chiral indole-2-sulfoxides

The conversion of (Ss)-3-(omega-allylsilane and silyl enol ether)indole-2-sulfoxides to spirocyclic indolenines and then to oxindoles proceeds, in favorable cases, with moderate levels of chirality transfer from sulfur to C3 of the indole core. A mechanistic model, which features either an Sn2'-like additive Pummerer sequence or a tight ion pair generated by an Sn1-like vinylogous Pummerer transform, is proposed to rationalize the sense of asymmetric induction.