Solid-state 2H NMR structure of retinal in metarhodopsin I

The structural and photochemical changes in rhodopsin due to absorption of light are crucial for understanding the process of visual signaling. We investigated the structure of trans-retinal in the metarhodopsin I photointermediate (MI), where the retinylidene cofactor functions as an antagonist. Rhodopsin was regenerated using retinal that was (2)H-labeled at the C5, C9, or C13 methyl groups and was reconstituted with 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine. Membranes were aligned by isopotential centrifugation, and rhodopsin in the supported bilayers was then bleached and cryotrapped in the MI state. Solid-state (2)H NMR spectra of oriented rhodopsin in the low-temperature lipid gel state were analyzed in terms of a static uniaxial distribution (Nevzorov, A. A.; Moltke, S.; Heyn, M. P.; Brown, M. F. J. Am. Chem. Soc. 1999, 121, 7636-7643). The line shape analysis allowed us to obtain the methyl bond orientations relative to the membrane normal in the presence of substantial alignment disorder (mosaic spread). Relative orientations of the methyl groups were used to calculate effective torsional angles between the three different planes that represent the polyene chain and the beta-ionone ring of retinal. Assuming a three-plane model, a less distorted structure was found for retinal in MI compared to the dark state. Our results are pertinent to how photonic energy is channeled within the protein to allow the strained retinal conformation to relax, thereby forming the activated state of the receptor.     

Theory of sheath in a collisional multi-component plasma

The aim of this brief report is to study the behaviour of sheath structure in a multi-component plasma with dust-neutral collisions. The plasma consists of electrons, ions, micron size negatively charged dust particles and neutrals. The sheath-edge potential and sheath width are calculated for collisionally dominated sheath. Comparison of collisionless and collisionally dominated sheath are made.     

Combining PFG and CPMG NMR measurements for separate characterization of oil and water simultaneously present in a heterogeneous system

When analyzingT ₂ relaxation time curves from an ordinary Carr-Purcell-Meiboom-Gill (CPMG) experiment in a multicomponent system, where internal magnetic field gradients broaden the line widths significantly, there is very little direct information regarding the mobility of the components and on the type of environment experienced by each component. Compared to a standard CPMG experiment, a combination of pulsed field gradient (PFG) methods with the CPMG experiment will increase the amount of information that is obtainable from the nuclear magnetic resonance (NMR) experiment on a system of components differing significantly in molecular mobility. We propose a method for achieving separate measurements of theT ₂ attenuation of two components simultaneously present within a sample, and we believe it to be generally valid for any system in which the components differ significantly in molecular mobility. The two components could be oil and water in porous rock, or fat and water in a biological tissue, where a separation of theT ₂ attenuations for the two components will add insight to the study of the systems. In order to verify the method we made use of a sample containing a mixture of oil and water in two separate bulk phases, and compared the results with PFG-CPMG experiments performed on samples containing oil or water only, respectively. The method was applied to systems containing glass spheres immersed in water and oil, and it was possible to obtain information about the physical environment of the components which otherwise is not easily obtainable. The method presented here is therefore presumably applicable to whole rock cores or tissue samples.     

The development of a cellular automaton-finite volume model for dendritic growth

A cellular automaton to track the solid–liquid interface movement is linked to finite volume computations of solute diffusion to simulate the behavior of dendritic structures in binary alloys during solidification. A significant problem encountered in the CA formulation has been the presence of artificial anisotropy in growth kinetics introduced by a Cartesian CA grid. A new technique to track the interface movement is proposed to model dendritic growth in different crystallographic orientations while reducing the anisotropy due to grid orientation. The model stability with respect to the numerical parameters (cell size and time step) for various operating conditions is examined. A method for generating an operating window in Δt and Δx has been identified, in which the model gives a grid-independent set of results for calculated dendrite tip radius and tip undercooling. Finally, the model is compared to published experimental and analytical results for both directional and equiaxed growth conditions.     

Characterization of monofluorinated polycyclic aromatic compounds by 1H, 13C and 19F NMR spectroscopy

Monofluorinated polycyclic aromatic hydrocarbons (F-PAHs) have attracted much attention in analytical, environmental, toxicological and mechanistic studies because of their physico-chemical properties, which are closely similar to those of the parent PAHs. Because of this, full NMR characterization has become of interest. Complete 1H, 13C and 19F NMR chemical shifts, and also 1J(H,C), (n)J(C,F), (n)J(H,F) and (n)J(H,H) coupling constants, have been assigned for the F-PAHs 1-fluoronaphthalene, 2-fluorofluorene, 5-fluoroacenaphthylene, 2-fluorophenanthrene, 3-fluorophenanthrene, 3-fluorofluoranthene, 1-fluoropyrene, 1-fluorochrysene, 2-fluorochrysene, 3-fluorochrysene and 9-fluorobenzo[k]fluoranthene. To allow comparison with the corresponding parent PAHs, the 1H and 13C chemical shifts of acenaphthylene, phenanthrene, fluoranthene, pyrene and benzo[k]fluoranthene were determined. Chemical shift increments and the effects on the coupling constants from the fluorine substitution are discussed.     

Determination of water compartments in rat myocardium using combined D-T1 and T1-T2 experiments

We have used combined D-T1 and T1-T2 correlation experiments to explore water compartments in rat heart tissue (myocardium). The results show that two main compartments can be identified, which we assign to extracellular (ec) and intracellular (ic) water. The exchange rate of water across the cell membrane was found to be on the order of 0.1 Hz. In addition, the T1-T2 correlation measurements indicate that the ic compartment contain two T2 populations.     

Proton yields from quasielastic pion scattering on 27Al and 208Pb

A singles measurement of the quasielastic scattering of 255 MeV pions by ²⁷Al and ²⁰⁸Pb has been made. The measured values for the ratio R of π⁺ and π^? induced cross section, averaged over all measured angles of 2.2 ± 0.2 and 1.5 ± 0.1 for ²⁷Al and ²⁰⁸Pb respectively are substantially below the classical impulse approximation value of 11. A semiclassical nucleon charge exchange model is described for singles and coincidence measurements and is compared with the measured proton spectra. The comparison indicates that the singles proton spectra are dominated by events other than the quasielastic process whereas the coincidence data reported earlier and compared with the present calculations support the quasielastic interpretation. A strongly decreasing dependence of R on A for coincidence measurements may be interpreted as supporting the view that recoil nucleon charge exchange plays an important role in the quasielastic knockout process.     

Analysis of a shielded TE011 mode composite dielectric resonator for stable frequency reference

Analysis of a TE₀₁₁ mode composite sapphire-rutile dielectric resonator has been carried out to study the temperature variation of resonance frequency, close to the Cs atomic clock hyperfine frequency of 9.192 GHz. The complementary behavior of dielectric permittivity with temperature of the composite has been exploited to obtain the desired turning point in the resonant frequency. The frequency of the composite structure is found to be independent of the shield diameter beyond four times the puck diameter.