Divergent chemical synthesis of prolines bearing fluorinated one-carbon units at the 4-position via nucleophilic 5-endo-trig cyclizations

N-[3-(Trifluoromethyl)homoallyl]sulfonamides, prepared via ring opening of (S)-glycidyl ethers or 2-aryloxiranes with 1-(trifluoromethyl)vinyllithium, underwent intramolecular addition or S(N)2'-type reaction in the normally disfavored 5-endo-trig fashion, leading to 2-substituted 4-(trifluoromethyl)- or 4-(difluoromethylene)pyrrolidines. Both alpha- and beta-face-selective hydrogenation of the 4-difluoromethylene group afforded syn- and anti-4-(difluoromethyl)pyrrolidines, respectively. These sequences, followed by the oxidation of a 2-hydroxymethyl or 2-aryl group, successfully provided prolines with a trifluoromethyl, difluoromethylene, or difluoromethyl group at the 4-position, including optically active prolines.     

Direct observation of enhanced translocation of a homeodomain between DNA cognate sites by NMR exchange spectroscopy

A novel approach is presented for studying the kinetics of specific protein-DNA interactions by NMR exchange spectroscopy. The experimental design involves the direct observation of translocation of a homeodomain between cognate sites on two oligonucleotide duplexes, differing by only a single base pair at the edge of the DNA recognition sequence. The single base-pair change perturbs the 1H-15N correlation spectrum of a number of residues, while leaving the affinity for the DNA unchanged. The exchange process has apparent rate constants in the 5-20 s-1 range which are linearly dependent upon the concentration of free DNA. These rates are about 3 orders of magnitude larger than the dissociation rate constant determined by gel shift assays at nanomolar DNA concentrations. The complete NMR exchange data set, comprising auto- and cross-peak intensities as a function of mixing time at five concentrations of free DNA, can be fit simultaneously to a simple model in which protein translocation between DNA duplexes occurs via a second-order process (with rate constants of approximately 6 x 104 M-1 s-1) involving direct collision of a protein-DNA complex with free DNA. This is akin to intersegmental transfer, and a physical model for the process is discussed. Rapid translocation at high concentrations of free DNA observed directly by NMR exchange spectroscopy reconciles the long half-lives of protein-DNA complexes measured by biochemical analysis in vitro with the highly dynamic behavior of such complexes observed in vivo. The relevance of this mechanism to the kinetics of protein-DNA interactions within the cell is discussed.     

Bitterness suppression of BCAA solutions by L-ornithine

The purpose of the present study was to evaluate the bitterness-suppressing effect of L-ornithine (L-Orn) on single or mixed solutions of branched-chain amino acids (BCAAs) using human gustatory sensation tests and an artificial taste sensor. The BCAAs tested (L-isoleucine (L-Ile), L-leucine (L-Leu), and L-valine (L-Val)) are the main components of various enteral nutrients or supplements. The bitterness-suppression effect of L-Orn was also compared with the effect of L-Arg. L-Orn was effective in suppressing the bitterness of single or mixed solutions of BCAAs in human gustatory sensation tests, the effect being similar to or greater than that of L-Arg. The artificial taste sensor was able to predict the bitterness-suppressing effects of L-Orn and L-Arg. The response electric potential patterns of L-Val, L-Leu and L-Ile solutions to which 100 mM L-Arg had been added were quite similar to the sensor response patterns of the 100 mM L-Arg solutions alone. The relative response electric potential patterns of L-Val, L-Leu or L-Ile solutions containing 100 mM L-Orn in channels 5-8 (positively charged) are similar to that of single solution of 100 mM L-Orn.     

Self-assembled lamellar nanostructures of wholly aromatic rod-rod-type block molecules

Wholly aromatic rod-rod type di- and triblock molecules, oligo(ether sulfone)-b-oligo(ether ketone)s (OES-OEK), were synthesized to study a solid-state self-assembled nanostructure. The OES and OEK segments in the block molecules form segregated crystalline domains. The energy-filtering transmission electron microscopy images revealed that the di- and triblock OES-OEK co-oligomers formed lamellar nanostructures with a periodicity of approximately 9 and 13 nm, respectively. [structure: see text].     

Elucidation of codoping effects on the solubility enhancement of Er3+ in SiO2 glass: striking difference between Al and P codoping

The codoping effect mechanism of Al and P on the solubility enhancement of Er(3+) ion in SiO(2) glass was clarified by electron spin-echo envelope modulation spectroscopy. It turned out that doped P ions preferentially coordinate to the Er(3+) ion to form a "solvation shell structure", and the environment is similar to that in phosphate glass, while doped Al ions do not form such a selective solvation structure, taking octahedral coordination. This striking difference indicates that the primary roles of the P-doping and the Al-doping are attributed to "enthalpy of mixing" and to "entropy of mixing", respectively.     

Application of the generalized Douglas scheme to optical waveguide analysis

The generalized Douglas (GD) scheme is applied to the analysis of various optical waveguides. The GD scheme has an advantage over the conventional finite-difference scheme in that the truncation error can be reduced, while maintaining a tridiagonal matrix. To demonstrate fourth-order accuracy for a three-dimensional problem, a graded-index fiber is analyzed. Furthermore, the coupling length of a rib waveguide directional coupler is analyzed and its convergence behavior is discussed. Application of the GD scheme to a time-domain analysis is also presented.     

Diastereoselective reductive Mannich-type coupling of acrylates and aldimines with Rh(Phebox) catalyst

The conjugate reduction of α,β-unsaturated esters such as acrylates, crotonate, and cinnamates followed by Mannich-type coupling toward aldimines was efficiently promoted by rhodium-bis(oxazolinyl)phenyl catalyst and alkoxyhydrosilanes to show high anti-selectivity up to 99.     

Ag Clusters as Active Species for HC-SCR Over Ag-Zeolites

The addition of hydrogen in the reaction atmosphere is effective in promoting the activity of Ag/alumina and Ag-zeolites on the selective reduction of NO by hydrocarbons (HC-SCR) at low temperatures. The increment of NO conversion over Ag-MFI corresponds to the periodic addition of hydrogen into C₃H₈-SCR conditions. The UV–VIS spectra of Ag-MFI have revealed that the addition of hydrogen results in the formation of Ag_n^δ+ clusters due to partial reduction and agglomeration of Ag species. The coincidence of the formation of the Ag_n^δ+ clusters and the increment of NO conversion suggests that Ag_n^δ+ clusters are the highly active species for HC-SCR. From analysis by H₂-TPR, UV–VIS, and EXAFS, the structure of Ag_n^δ+ clusters on Ag-MFI is identified as being Ag₄²⁺ on average. The formation of Ag clusters was strongly affected by the type of zeolites: The major Ag species are Ag⁺ ions for MOR, Ag_n^δ+ clusters for MFI and BEA, and relatively large metallic Ag_mparticles for Y. The sequence of Ag agglomeration (MOR < MFI < BEA < Y) is in accordance with the strength of the acid sites of zeolites. It can be expected that the interaction between the positive charge of Ag_n^δ+ clusters and acid sites, i.e., the ion-exchange site of zeolites, stabilizes Ag_n^δ+ clusters. The type of Ag species under HC-SCR conditions depends on the concentration of gas-phase oxidants (NO, O₂) and reductants (H₂, HC), and also on the number and strength of the zeolite acid sites.