Dendrobeaniamine A,a new alkaloid from the Arctic marine bryozoan Dendrobeania murrayana

Abstract

The new guanidine alkaloid Dendrobeaniamine A (1) was isolated from the organic extract of the Arctic marine bryozoan Dendrobeania murrayana. The chemical structure of 1 was elucidated by spectroscopic experiments, including 1D and 2D NMR and HRESIMS analysis. Compound 1 is a lipoamino acid, consisting of a C₁₂ fatty acid anchored to the amino acid arginine. The bioactivity of 1 was evaluated using cellular and biochemical assays, but the compound did not show cytotoxic, antimicrobial, anti-inflammatory or antioxidant activities     

Immunochemical determination of dioxins in sediment and serum samples

Polychlorinated dibenzo-p-dioxins (PCDDs) and polychlorinated dibenzofurans (PCDFs) are considered highly toxic contaminants and the environmental and biological monitoring of these compounds is of great concern. Immunoassays may be used as screening methods to satisfy the growing demand for rapid and low cost analysis. In this work, we describe the application of an immunoassay that uses 2,3,7-trichloro-8-methyldibenzo-p-dioxin (TMDD) as a surrogate standard for 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) to sediment and human serum samples. Sample extraction and preparation methods were developed with the aim to establish the simplest, cost-effective and efficient removal of the matrix interferences in the enzyme-linked immunosorbent assay (ELISA). The overall method for sediments is based on a hexane extraction; clean up by a multilayered silica gel column and an activated carbon column; an organic solvent exchange with DMSO–Triton X-100 and ELISA measurement. The gas chromatography–high resolution mass spectrometry (GC–HRMS) validation studies (n = 13) revealed that the method is suitable for the toxic equivalents (TEQ) screening of dioxin in sediments with a method detection limit of about 100 pg g⁻¹ dry sediment with a precision of 13–33% R.S.D. The analysis of a large number of samples originating from different sources would be required to establish more precisely the screening level, as well as the number of false positives and negatives of dioxin TEQ by the immunoassay for sediments. The immunoassay method for sediment analysis offers improvement in speed, sample throughput, and cost in comparison to GC–HRMS. Dioxins were determined in serum samples after a simple liquid–liquid extraction and solvent exchange into DMSO–Triton X-100 without further dilution. The current method (approximate method LOQ of 200 pg ml⁻¹ serum) is not sufficiently sensitive for the determination of dioxins in serum to measure acceptable exposure limit.     

Structure of a crystalline vapochromic platinum(II) salt

Square-planar cations of the orange form of [Pt(Me2bzimpy)Cl](PF6) x DMF [Me2bzimpy = 2,6-bis(N-methylbenzimidazol-2-yl)pyridine] stack along the b axis in a head-to-tail arrangement with short interplanar spacings (3.35 and 3.39 A). Long intermolecular Pt...Pt contacts [4.336(2) and 4.565(2) A] and comparatively short Me2bzimpy...Me2bzimpy distances are consistent with spectroscopic measurements for orange salts of Pt(Me2bzimpy)Cl+. The DMF solvent molecules line channels parallel to c, which may provide a conduit for vapor absorption. The crystals are vapochromic, changing from orange to violet upon exposure to acetonitrile vapor. The changes in spectroscopic properties accompanying vapor absorption are consistent with changes in intermolecular interactions between complexes.     

Hydrogen bonding in macrocyclic receptor systems

Abstract

The interactions of macrocyclic polyethers with alkali and alkaline earth cations have been well studied and much about their chemistry is now well understood. Less well examined or comprehended are hydrogen bond interactions. A combination of ion selective electrode binding constant determination techniques and fast atom bombardment mass spectrometry are brought to bear on this problem. It is found that all-oxygen crown ethers and their derivatives exhibit quite different complexation behaviour with ammonium salts than do their various azacrown counterparts.     

On the use of scans at a constant ratio of B/E for studying decompositions of peptide metal(II)-ion complexes formed by electrospray ionization

The use of sector mass spectrometers to study metastable ion decompositions of peptide metal-ion complexes formed by electrospray ionization is discussed. Products that are formed by charge-separation reactions are characterized by large kinetic energy release distributions. This causes scans at a constant B/E to give incorrect product ion abundances and possibly incorrect mass assignments. Two instrumental methods exist that can be used either to detect the ions or to estimate relative ion abundances: a floated collision cell or mass-analyzed ion kinetic energy spectrometry (MIKES) scans. The floated collision cell, by virtue of an altered B/E scan law, however, discriminates against important metastable ion reactions that occur outside the cell. MIKES scans provide a clearer estimate of product ions that arise by metastable ion charge-separation reactions. Problems with pseudotandem (first field-free region) experiments are also discussed.     

Pseudochelin A,a siderophore of Pseudoalteromonas piscicida S2040

A new siderophore containing a 4,5-dihydroimidazole moiety was isolated from Pseudoalteromonas piscicida S2040 together with myxochelins A and B, alteramide A and its cycloaddition product, and bromo- and dibromoalterochromides. The structure of pseudochelin A was established by spectroscopic techniques including 2D NMR and MS/MS fragmentation data. In bioassays selected fractions of the crude extract of S2040 inhibited the opportunistic pathogen Pseudomonas aeruginosa. Pseudochelin A displayed siderophore activity in the chrome azurol S assay at concentrations higher than 50 μM, and showed weak activity against the fungus Aspergillus fumigatus, but did not display antibacterial, anti-inflammatory or anticonvulsant activity.     

SPECTROSCOPY OF CHLOROPHYLL IN BIOLOGICAL AND SYNTHETIC SYSTEMS*

Abstract. –This review discusses recent spectroscopic studies aimed at discovering the structure, orientation, and function of chlorophyll in vivo. In plant membranes there appear to be at least two distinct types of chlorophyll a. The greater part, over 99%, is antenna chlorophyll which absorbs and transfers radiant energy to a few specialized chlorophyll molecules in a reaction center where the actual charge separation occurs. A dimer-oligomer model for antenna chlorophyll has been proposed on the basis of comparative studies of the absorption spectra of chlorophyll in various dry solvents and in vivo. Unfortunately a similarity between essentially structureless broad spectra is very weak evidence for their original identity. Also the requirement of an anhydrous environment for most of the chlorophyll in biological material is an unlikely postulate. A cross-linked, linear polymer model of chlorophyll in vivo has also been proposed. Recent Resonance Raman spectroscopic results appear to rule out, in large part, either polymer model and once again suggest that it is the various attachments of chlorophyll to proteins which determine its function as antenna pigment in vivo. Circular dichroism measurements of chlorophyll in various plant materials have also led to the conclusion that antenna chlorophyll has strong interaction with protein. However, some doubt still exists as to the interpretation of these CD results. New studies of fluorescence, polarized fluorescence and Resonance Raman spectroscopy of various plant species corroborate the original proposition, based upon deconvolution of absorption spectra, that antenna chlorophyll occurs in vivo in at least five discrete pools, and that each pool is likely to be located in the same environment in different plants. A new model-systems approach to simulating chlorophyll in vivo has come through the use of lipid bilayers and liposomes. Charge transfer has been observed between chlorophyll in a lipid phase and phycobiliproteins or cytochrome c. The most promising, newly synthesized model for the reaction center, P700, is a covalently bound dimeric derivative of pyrochlorophyllide a. Its properties are similar to P700 in several respects except for reversible photooxidation which has not yet been observed. By detergent treatments chlorophyll-protein complexes having about 20–40 chlorophyll a molecules for every P700 have been isolated from different plants, and their spectroscopic properties are under investigation in several laboratories. The several hypotheses to explain the shape of the oxidized minus reduced absorption difference spectrum of P700 have not yet been reconciled. The nature of the photosystem II reaction center chlorophyll, P680, is also a subject of active investigation. Its absorption difference spectrum appears to have two kinetic components.     

Anion-controlled nuclearity in nickel complexes with potentially dinucleating, poly(oxime) amine ligands

Two new ligands consisting of bis(oxime) amine units tethered by a bridge have been synthesized. Their nickel chloride and nickel nitrate complexes have also been synthesized and characterized by X-ray crystallography, FTIR, mass spectrometry, and elemental analysis. One of these ligands, L1 (N,N,N',N'-tetra(1-propan-2-onyl oxime)-diamino-m-xylene), is always dinucleating, while the other ligand, L2 (N,N,N',N'-tetra(1-propan-2-onyl-oxime)-1,3-diaminopropane), shows an unusual anion dependence on the nuclearity. When nickel chloride is used, the ligand acts in a dinucleating manner and coordinates two nickels; however, when nickel nitrate is used, the ligand acts in a monodentate fashion and coordinates only one nickel. Once the mononuclear complex is formed, it is not possible to add a second nickel if Ni(NO(3))(2) is used as the nickel source; it is possible, however, to add a second nickel if NiCl(2) is used as the nickel source. The dinuclear complex can be converted to the mononuclear one by either using silver nitrate to exchange the chloride anions for nitrates or by dissolving the complex in water. Ni(2)(L1)Cl(4)(DMF)(2).DMF: orthorhombic, P2(1)2(1)2(1), a = 12.2524(11) A, b = 16.6145(15) A, c = 20.1234(19) A, V = 4096.5(6) A(3), Z = 4. [Ni(2)(L2)Cl(4)(DMF)](2).2DMF: triclinic, P-1, a = 12.5347(5) A, b = 12.5403(5) A, c = 14.3504(6) A, alpha = 67.348(1) degrees , beta = 69.705(1) degrees , gamma = 81.549(1) degrees , V = 1952.25(14) A(3), Z = 1. Ni(L2).(NO(3))(2): monoclinic, P2(1)/n, a = 9.6738(3) A, b = 30.2229(9) A, c = 15.8238(5) A, beta = 97.995(1) degrees , V = 4581.4(2) A(3), Z = 8.